Colossoma macropomum (tambaqui): 118811856
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Entry
118811856 CDS
T09004
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04350
TGF-beta signaling pathway
cmao04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118811856
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118811856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118811856
Cell adhesion molecules [BR:
cmao04515
]
Immunoglobulin superfamily
DCC/UNC5 family
118811856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Interfer-bind
Ig_Rha78A_N
fn3_SORL1
fn3_2
NDNF
Izumo-Ig
DUF4998
V-set_CD47
GH101_dom-5
Fn3_ELFN
Fn3_Dep-1_3rd
SusE
EphA2_TM
DUF4834
Motif
Other DBs
NCBI-GeneID:
118811856
NCBI-ProteinID:
XP_036432286
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MAERGARWLLFFSTLTSSLVAADKADKVRTFTPFRFSVEPVDTLAVRGLPAVLNCSVSSK
APVRVEWKKDGTFPNLAADDRRRLLPDGSLLVSTVVHSKHNKPDEGVYQCVATIDNLGTI
SSRTARLTVAGLPRFSSQPEGVSVRPGGSEVLSCEVSAELIPFTHWEKSGQAVETDSRVV
QLPSGALVISNASQADAGSYRCVIEGLGPVKSSEDAQLQILPDSAAEDRMEVLLGPTAVT
KAVGETVLLPCVVKGYPLPVIRWMLDSKVINESDGRFAVIGGGVLQITNLTENDAGTYSC
QADNGNETIETQAQLTVQVPPQFLKKPSNMYAHEAMDIIFECEVTGSPAPTVKWLKNGDA
VIPSDYFKIVDQHNLQVLGLVRSDEGFYQCLAENEAGNIQASAQLIILDLDIALPTSTVP
SLTSATTDHVASGLGERLGPTPSPPRDVVASLVSTRFIKLTWRLPAEPHGENISYSVFYS
LDGSSRERVQNTSAPGEMQVTIQNLIPDTKYTFRVVASNRNGLGESSTPLTVATQPEVQV
PGPAPNLQAVSVTPTSVTLTWERPVTGNGEIQTYKLYYSEKGQDSEQDMDVVGLAYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDLTIQTLSDVPSAAPQNLSLEVQNSRSIMVRWQPPP
LGTQNGELTGYKIRYRKGGRKGEAAEIMTTQLSQLIDGLERGTEYSFRVSATTVNGSGPA
TEWLTGETFESDLDESQVPGAPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGNP
HAQTVKVDYKQRYYSIDNLEPSSHYVITLKAFNNMGEGIPVYESAITRPQSDPIDPDIDL
FELFHHTPHTPAPDPSPMLPPVGVQASVISHDTIKVSWADNSLAKNQKITDSRFYTVRWK
TNIPANTKYKVANTTTLTHTVTNLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFETLPTS
APKDVTVVSKEGRPRTININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVMGNRLT
HQIQELTLDTTYYFKIQARNSKGMGPLSDTVQFRTPKAEPSDKMSSDQVGFHGTPGGRSP
LPDHGFGSTLDKPGITGSQENHILVIVIIVSVGVFTIIAVVVGAFLCTRRSNSHQKKKRA
ACKSNNGSHKYKSTSKDLKPPDLWIHHERLEMKPIDKSPEPNPVMTETPIPRSQDPSGES
GHQRRNSFRGHEIEESVSTLAGRKGVRPKIMMPFDSQPPQPIISAHPIHSVDYLHHHHHH
HYHPPPRGYLHHQISLRAPATPSTPGPYLDRAPSSESVRTQAPAPEPPVVPTQPSSAAEL
QHTEVVIKEEDPPSYKPPTAHVHPTHPMKSFAVPTVSVSAHNPPSSALPCTPLLAQPVPG
VKTASIGTLSRVRAPVAVTVPSAPDQAENSKMLPQKETAYETDELSEEMAHLEGLMKDLN
AITTA
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcgcggtggctcctgtttttctccactctcacctccagccttgtg
gctgcagataaagcggataaagtgaggactttcactcctttccggttctcagtggagcca
gtggacacgctggctgtgcgcgggctgcctgctgtgctgaactgctctgtgtccagcaag
gctccagtgcgagtggaatggaagaaggacggcacattccccaacctggcagcagacgac
cgccggcgcctgctcccggacggctctcttctcgtcagcactgtggtgcactccaaacac
aacaaacctgacgagggcgtctaccagtgtgtggccaccattgacaacctgggcaccatc
agcagccgcactgctcgcctgactgtagcaggtctaccacgtttctctagccagccggag
ggtgtgtcagtgcgcccaggggggagcgaggtgctgagctgtgaggtgagtgctgagctc
attccgttcacccactgggagaaatctggccaggccgtggaaacggacagccgggtggtc
cagctgcccagcggagctctggtgatcagcaacgcctcacaggctgacgctggctcatac
cgctgtgtaatagagggactgggaccagtcaagagcagtgaagatgcacagctacagatt
ttaccagactctgctgctgaagacaggatggaggtcctgctgggtccaactgccgtgacc
aaagctgtgggcgaaactgtattactaccctgcgtggtgaagggctaccctctccctgtc
attcgctggatgctggacagcaaggtcataaatgaaagtgatgggaggtttgctgtgatt
ggtggaggcgtcctgcagatcaccaacctaacagagaacgacgctggaacgtacagctgc
caggcggacaacggcaatgagaccatcgagacgcaagcccagctcactgtacaagttcct
cctcagttcctcaagaaaccctcgaatatgtacgcccatgaggccatggatatcatcttt
gagtgtgaagtcacgggctcacctgcccccacagtgaagtggctgaagaacggagatgct
gtcatccccagtgactacttcaaaatagtggatcagcacaacctgcaggtgctgggcttg
gtgaggtctgatgagggcttttatcagtgcctggctgagaacgaggctgggaacattcag
gccagcgcccagctcatcatcctggacctggacattgccctccccacttccactgtcccc
tcactgaccagtgccactactgaccatgtagcctccggtttgggggagcgcttgggccct
accccctcgcccccacgggacgtcgtggcttcgctggtctccacccgcttcatcaagctg
acctggcggctgccggccgagccacatggagaaaacatcagctactctgtcttctacagc
ctcgatggctccagcagggagcgtgttcagaacacctcggctccgggagagatgcaggtc
accatccagaacctcatccctgataccaagtacactttcagggtggtggcgtccaacaga
aacggcctgggtgaaagctcaaccccccttacagtggccacccagcctgaagttcaggta
ccaggacctgcccccaacctgcaggcagtgtctgtcacacccacatcagtcactctgacc
tgggagagaccagtcactggcaatggggagattcagacctacaaactctactacagtgag
aagggacaagactcagagcaggacatggatgttgtaggcttggcgtacacaatgaccggg
ctgaagaaattcacagaatacagtttcagagtggtggcttacaacaagcatggccctgga
gtctctactgaagacctgaccattcagactctctctgatgtaccaagtgcagcacctcag
aacctgtctctcgaagtccagaactcaaggagcattatggtccggtggcagccgcctccc
ctgggaactcagaacggggagctgacaggctataagattcgctacaggaagggaggaagg
aaaggagaagcagctgaaatcatgaccacccaactctctcagcttattgatggtttggag
agagggactgagtactcattccgggtgtcggccactacggtgaacggaagcggcccggcc
acagagtggctcacaggcgagaccttcgagagcgacctggatgagtctcaggtacctgga
gcgcccagttctctgcatgtgcggcccctggtaaacagcattgtagtgagctggactcct
ccggagaaccaggacatcgtggtgaggggctacagcatcggctacggcataggcaaccct
cacgcgcaaaccgtcaaagtggactacaaacagcgctactacagcatcgacaacttggaa
cccagctcgcactacgtgatcactctgaaggctttcaacaacatgggtgagggaatacct
gtgtatgaaagtgccatcaccaggccccagtcagatcccatagatccagatattgatttg
tttgaactcttccatcataccccccacaccccagcgcccgatccctcccccatgctccct
cccgtgggcgtgcaggcctccgtcatcagccacgataccattaaagtatcctgggctgac
aactccttggccaagaaccagaagatcacggactctaggttctacactgtccgctggaag
accaacataccagccaacaccaagtacaaggttgcaaacaccaccactctgacacacaca
gtgacgaaccttaagcccaacacactgtacgagttctccgttatggtcaccaaaggccga
cgcagcagcacctggagtatgactgctcacggcaccaccttcgagactcttcccacctcc
gctcccaaagatgtcactgtggtcagtaaagagggccgtccccgcaccatcaacatcaat
tggcagccaccaactgaggccaatggcaaaatcacaggctacatcatctactacagtacg
gatgtgaatgcagaggtacatgactgggttgtagagccagtgatggggaacagactgaca
caccagatccaggagctcactctagacacaacttactactttaagatacaggcccgcaac
tctaaaggcatgggaccactctctgacaccgtgcagttccgcacacccaaagctgaaccc
tctgacaaaatgtcaagtgatcaagtaggcttccatggtacgcctgggggacgctctcct
ctgcctgatcacggattcggatccaccctcgataagccaggaatcacaggcagtcaggag
aatcacattctggtgatagtcattatcgtttctgtgggagtgttcaccatcatcgctgtg
gtggtgggggcatttctctgtacacgacgctccaactcccatcagaaaaagaaacgagct
gcctgtaagtccaataacggatcccataagtacaaaagcacctctaaagacctgaagccc
cctgacctgtggatccaccacgagcgtctggagatgaagcccatagacaaatcccctgag
cccaacccggtcatgacggagactcccattccccgcagtcaggacccatccggtgagtct
ggccaccagagacgcaactcattccggggtcatgagattgaggagagtgtgtcaacgctg
gcaggcagaaaaggagtgaggcccaaaataatgatgcccttcgactcgcaacccccacaa
cctattattagtgcccatcccatccattctgttgactatcttcatcatcaccatcaccat
cattatcaccctccacctcgtggttacctccatcatcagatcagtctgagggctcctgct
actccctccactcctggcccttatttagacagggctccttcttcagaatctgtaaggacg
caggctcctgcccctgagcctccggtcgtcccgactcagccatccagtgcagcagagctg
cagcatacagaggtggtgattaaagaggaggatccgccctcgtacaagccccccacggcc
cacgttcaccccacacaccccatgaagagctttgctgtacccactgtatctgtctcagct
cataacccacccagctctgccctgccctgcacccccctgctagcccagccagttcctggc
gtgaagacggcgtctataggcactctgagtcgagttcgggcgccggtggcagtgacggta
cccagcgctcctgatcaagcagaaaacagcaagatgcttccgcagaaagagacagcgtat
gagacagatgagctgtcggaggagatggctcacctggagggtttgatgaaggacctgaac
gccatcacaacagcctga
DBGET
integrated database retrieval system
