Colossoma macropomum (tambaqui): 118811902
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Entry
118811902 CDS
T09004
Symbol
myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118811902 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118811902 (myo5c)
04131 Membrane trafficking [BR:
cmao04131
]
118811902 (myo5c)
03029 Mitochondrial biogenesis [BR:
cmao03029
]
118811902 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmao04812
]
118811902 (myo5c)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118811902 (myo5c)
mRNA cycle factors
P-body specific factors
118811902 (myo5c)
Membrane trafficking [BR:
cmao04131
]
Others
Actin-binding proteins
Myosins
118811902 (myo5c)
Mitochondrial biogenesis [BR:
cmao03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118811902 (myo5c)
Cytoskeleton proteins [BR:
cmao04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118811902 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
nSTAND3
AAA_16
AAA_22
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118811902
NCBI-ProteinID:
XP_036432368
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MALQELYTKYNRVWIPDTEQVWKSAEILKDFTPGDQALHLQLEDGTVLQYPVEGPGQLPP
LRNPDILVGENDLTALSYLHEPAVLHNLRVRFVDSRIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNKRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACAEQPEFKSLRLLSADKFNYTCMGGDTDIQGVDD
RADMAETRRTFNLLGLKDDFQADVFKMLAAILHLGNVVIKAVGSDQSSISSSNSHLAVFC
DLLGVRQEDMSRWLCHRRIVLASETVVKPQPRERAINARDALAKHLYAYLFDCVIHKINQ
ALRVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDMNWLQKLYNYLGSKPLFEKPR
LSNEAFVIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRASKFPLLADFFNEEENNSVIK
GVKVKAARPAVKPVNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYD
SKRVVQQLRACGVLETVHISAQSYPSRWTYIEFYSRYSILMSQAELRAGEKKQICRTVLQ
RLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRTACITIQKHVRGWRQRQRYLSMRQA
AIIIQQYIRGKRQIRRTLTAAALKQAWAAVVIQRHCRGYLIRRLYLLVRVATITIQAYAR
GWMARKRYKKMVEEHKALVLQKYARAWLVRRRFQTMRRLVLNVQLSYRVQQLRKKIEEQN
KENRGLVERLTSLANAHAQGLDRAQALEMELSKAVSEKASVEEREKKNKEDTDKVIAQLQ
GERDKARLENQTLQQKLKDSIEQMTDKFEKHKKKLMEDLEREERLRKVAEHNSELQKEDL
EKEILALKEENRRLREEKVRLQAQIEEDTQVNKELQEQLSQLTKHVKVIPELRKEINSLQ
MEKDETDRKMREQTQQTREKMNLITRRLLGEAKEEELILRMKKEATENADDEGDLLFAFD
GLQNATRVMETQLKEQREGYESQVEALVFKNDHLTRENQQLQALFQEKSDVNRSIGQEVA
RLNAENMVIPELKQQVSELQRHRQELETQLKEQSAEMNDKMMKVSSELQSKLEEERSQRR
LLDERNRESEREKEELERRLEELEEEMEQIKRLQQAESEAKNKFRQETSRLTAENMDFEE
QLDMKDRTIKRLQDQIKALQAPVKVNQKAAPALPKEYLGMLEYKKEDEDKLVRTLIRELK
PRGVVVNMIPGLAAHLLFMCVRHADYLSDGNKLKSLMHAIITSIKQVITDHQENFEILSF
WLSNTYYLLNCLKQYSGEEEFMKHNTQRQNKNCLQNFDLSEHRQILSDLAIRIYHQFINI
MEDTLFPMIVPAMLEHESLQGISSMKPTGFRKRSNSLLEDGHSEGQAYSISSVLQLMNAF
HSSMVQHGMEPQLQGQAIRQLFYLIGATALNSILLRKDLCSCRKGMQIRCNISYLEEWLR
EKGLQGCSVMETLGPLSQAAWLLQVNKTTDEDAAEIQQRCYELSPVQIVKILNSYTPIDD
FEKRVAPSFVRKVQALLQEREGSNQLMMDAQYRFQVTFPFCPSTQALELLQVPSSLHLGF
LTRI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcaggagctctacactaaatataaccgagtgtggatccctgacactgagcag
gtgtggaaatcagcagaaatcctcaaagacttcacaccaggagaccaagctctgcaccta
cagctcgaggatggaactgtccttcagtaccctgtggaggggcctggtcagttaccccct
ctccgtaaccctgacatcctggtgggggagaatgacctgacagccctgagttacctgcac
gagcctgcagtgctgcacaacctgcgcgtcagatttgtggactctagaatcatctacact
tactgcggaattatcttagtggctgtcaacccttataaacagctccccatctatggagat
gcagtcatccatgcttattctggccagaatatgggcgatctggacccccatatatttgca
gtggcagaagaagcatacaagcagatggcaaggaataatcggaaccagtctatcatagtg
agtggagagtctggagcagggaagactgtgtctgctcgctatgctatgagatattttgca
atggtcagcaaatctagcagcaacaaacgagtagaggacaaggttttagcatcaaaccct
atcactgaggcaataggtaatgcaaagaccacaaggaatgacaacagcagtcgatttggg
aagtacactgaaatcagctttgacagaagataccagatcattggagccaacatgaggacg
taccttctagaaaagtcgagagttgtttttcagtcagagaatgagagaaactatcacatc
ttctaccagatgtgcgcctgtgcagagcagccagagtttaaaagcctaagactgttgagc
gcagacaagtttaactacacctgcatgggaggggacacagatatccaaggagtggacgac
cgcgctgacatggctgaaacccgccgcactttcaatctactgggactgaaggatgacttt
caggctgacgtgtttaagatgttggcagcgattctgcacctgggcaatgtggtgatcaaa
gcagttggctctgaccaatcgtccattagttcttccaactctcacctggctgtgttctgt
gatctgctgggagtcagacaagaagatatgagccgctggctgtgtcatcggcgtattgtc
ctggcgtctgagacagtggtcaaaccgcagccgagggaacgtgccatcaacgcccgggat
gcactggccaagcacctttacgcatatctgttcgactgtgtcatccacaagataaaccag
gcgctgcgtgtgcctggcaaacagcactctttcatcggagtgctggatatctatggattt
gaaacatttgatgtgaacagctttgagcagttttgtatcaactatgccaatgaaaagcta
caacagcagttcaatctgcatgtgtttaaactggagcaagaggagtacatgaaggaggac
atcccatggacactaatcgatttctacgacaaccaaccagtcattgatctgatcgaggct
aagatgggtatcctggacttgctggatgaagaatgtctgtttcctcaggggacggatatg
aactggctgcagaagctctataattatctgggctccaagcctctgtttgagaaacctcgt
ctgtccaatgaggcgttcgtgatccagcactttgcagacaaggtagaatatcagtgtaaa
ggtttcttagagaagaacagagatactctgtatgaagagctggtggacataatgcgagca
agcaagtttcctctcttggcagatttcttcaatgaagaggaaaataattctgttatcaaa
ggtgtcaaagtgaaagcggcaagacctgcagtcaaaccagtcaataagcagcttcggact
actgtaggagacaagtttcgcagttctttgtacctgttaatggaaacactgaatgctacc
acaccccattacgtccgctgcattaagcctaatgaggagaagctgccgtttgaatatgac
tcaaagcgtgtggtgcagcagctgcgggcgtgtggtgtacttgaaactgtgcacatcagc
gctcagagctacccctccaggtggacatatatagagttctacagccgctacagtattctg
atgagtcaggcggagctcagggcgggagagaagaagcagatttgtagaacagtgctgcag
agacttatccctgactcaaaccagtacaaatttggccggaccaagattttcttccgggcg
ggtcaggtagcgtacctggagaagctgcgtttggaccgtctgcgaactgcatgtataaca
atccagaagcacgtgcggggctggaggcagagacaaagatacctgagcatgagacaagct
gccattatcatccaacagtacatccgcggcaagaggcagatcaggcgcactttgacagca
gcagcactgaagcaggcctgggcagcagtggtcatccagagacactgccgtggctatctc
atacgacggctttacctgcttgttcgggttgctaccatcactatccaggcctacgccagg
gggtggatggcccgcaagcgctataaaaagatggtggaggagcacaaagctctggtttta
cagaagtacgcccgggcctggctggtacggcggcgtttccagaccatgcgcagactcgtt
ctgaacgtacagctctcctacagagtccaacaattgcggaagaaaatagaagagcagaat
aaagagaaccgtggacttgtggagagactgaccagtctggccaacgctcatgctcaagga
ctggacagggcacaggctctggagatggagcttagcaaagcagtcagtgagaaggcatct
gtagaggagagggagaagaagaataaagaagacactgataaggtgattgcacagcttcag
ggtgaaagagacaaagccagactggagaatcagactctccagcagaaactcaaagactcc
atagagcagatgacagacaaatttgagaaacacaagaaaaaactcatggaggacctggag
cgagaagagaggctgcggaaggtggcagagcacaacagtgagctgcagaaggaggacttg
gagaaggagatcttggcactgaaggaggagaaccgcaggctgagagaggagaaggttcgg
ctgcaggcacagattgaggaggacacacaagtcaacaaagagctgcaggagcagctcagt
cagctcaccaaacacgtcaaggtgataccagagttacgtaaggagattaacagcctccaa
atggaaaaagatgaaactgacagaaagatgagggagcaaactcagcagaccagagagaaa
atgaatttgattacgagacggctgctgggtgaggctaaagaagaggagcttattctcagg
atgaaaaaagaggcaacagaaaatgctgatgatgaaggagatcttctgtttgcctttgat
gggctgcagaatgctaccagggtgatggagactcagctgaaggagcaaagggaaggttat
gagagtcaggtggaagcgcttgtctttaagaatgatcatctgactagagagaaccagcag
ctgcaggctctctttcaggagaaaagtgatgtcaaccgcagcattggacaggaagtggcc
cgcctcaatgcggaaaacatggtgatcccagagctgaagcagcaggtttcagaactacag
cgacacagacaagagctggagactcagctaaaggagcaaagcgctgagatgaatgacaaa
atgatgaaggtatccagtgaacttcagagcaaacttgaggaggagcgctcccaacggagg
ctcttggacgagaggaatagagagagtgagagggagaaggaggagctggagaggaggttg
gaggagcttgaggaggagatggagcagataaagagactccagcaggcagagagtgaagca
aagaacaaattcaggcaggagacttcccgccttacagctgagaatatggactttgaggag
cagttagatatgaaggacagaaccataaagagactgcaggaccaaatcaaagctcttcag
gcacctgtgaaagtgaaccagaaagctgcaccagcccttcctaaggaatacctcggcatg
ctggagtataagaaggaggatgaagacaagcttgtgcgcacattaatacgggagctgaag
ccgaggggtgtggtggtgaatatgatccctgggctggcagcacatctcctctttatgtgt
gtgcggcatgctgattacctcagtgatggaaacaagctgaagtctctaatgcacgccatc
atcacgagcattaagcaagtcataacggatcatcaggaaaactttgaaattttgtccttc
tggctctcgaacacctactacctgctcaactgcctcaaacagtacagtggagaagaagag
tttatgaagcataacacacagcgacagaataaaaactgcctgcagaactttgacctgtcg
gagcacaggcagatcctcagtgatctcgccatccgcatctatcaccagttcataaacatc
atggaggacaccctctttcctatgattgtccctgcgatgctggagcacgagagtctgcag
ggcatctccagcatgaagcccacaggtttccgtaagcgctccaacagcctgctggaggac
ggtcacagcgagggtcaggcctacagcatctcctccgtcctgcagctgatgaatgccttc
cacagcagcatggtgcagcatggtatggagccacagctgcagggacaggccatccgccag
ctcttctacctgataggagcaaccgcactcaacagcatcctcctgcgcaaagacctctgc
tcctgccgcaagggcatgcagatcaggtgtaatatcagttatttggaggagtggttgagg
gagaagggtctgcagggctgcagtgtgatggagactctggggccgctgtctcaggctgct
tggcttctgcaggtgaataaaactactgacgaggacgcagctgagatccagcagagatgc
tatgagctctctcctgtccagattgtgaagatcctcaactcatacacacccatcgatgat
tttgaaaagcgggttgcaccatcattcgtgcgtaaagttcaggcgctgctgcaggagcgt
gaaggctcgaatcagctcatgatggatgcacagtatcgcttccaggtcacatttcctttc
tgcccctccacacaagctctggagctcctccaggttcccagcagccttcacctgggcttc
ctcacccgcatatga
DBGET
integrated database retrieval system
