Colossoma macropomum (tambaqui): 118812094
Help
Entry
118812094 CDS
T09004
Symbol
cntn1b
Name
(RefSeq) LOW QUALITY PROTEIN: contactin 1b
KO
K06759
contactin 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04514
Cell adhesion molecule (CAM) interaction
cmao04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118812094 (cntn1b)
04517 IgSF CAM signaling
118812094 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118812094 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cmao00537
]
118812094 (cntn1b)
Cell adhesion molecules [BR:
cmao04515
]
Immunoglobulin superfamily
Contactins
118812094 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cmao00537
]
Others
118812094 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Fn3_VIN3
CsgH
Motif
Other DBs
NCBI-GeneID:
118812094
NCBI-ProteinID:
XP_036432700
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MGGGVAMAAPVVLLSILSSLLLSADAIKPRFFEPRIFDKEATGFGPIFEEEPLDTVYAED
SPEAKISMNCRVRANPPATIKWWHNNWEIKLMEQPDEHYSLVGGNLVITNPEKSKHAGKY
VCVAKNVYGTTISKEATVKFGYLDQFPTDEREAVYVKEGQGAVLLCAPPSRYPAEVMYRW
IYNDFPNFIIPDQRRFVSQSTGNLYIAKVEASDVGNYSCFVSSPTIGKSVFSTPIPLVPQ
TEKEVKRYPADIRVRFPKTYALVGQNVTLECFALGNPLPHIRWRKLDADLPPNYEVSMNG
ALLHLINVQYEDEGSYECEALNVRGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLSC
TAVGKPLPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENTWGTIYANAELRVVSCA
PTFIYNPVKKTLLGAENGRVVIECKPRAAPKPRFIWKRGSELLSNSSRMFIWDDGSLEIL
NATKSDEGSYTCYAENDRGKANSTGTLSITEATKITVPPSDVEVIVGETTVLQCSASYDS
SLDITFIWTVDSYIINFATDFEHYEQMMGRENSGDLLIKNIQISHAGEYICTAQTIVDNA
TASANVFVQGRPGPPGGVRVEEIRDTSVKLVWSLGSDHGSPLTQHVVQTRDFYALDPEDW
KTAVTSPVFLDGKTETAEVVDLYPWMEYEFRVYAVNELGAGESSLPSIKIKTWDAIPTMS
PTDVDGYVGLNGELIVTWTPMKPQYFFGKKFGYVVAFKPHEDFDWKWSTVADPEARRFVY
KDTIIPNTEIQVKVKGYNSKGEGPYSLTKVVYSSESAPTEAPLDVYARQVTSTEALVWWL
PVYQVPPHWVDGYQIRYWRKYDDNEAAASRVLVHSSVNQTRLENMRPDSHYLIEVRAYNG
AGLGPPSEHCEMFTRRPPPNRRLRVYKYVSFTRKWLYIYWDHIYNYWNESYVEGYKILFR
KEGERYGKLYTTGRHYIDFPMPETGDYVIEIRARCEGGDGPISQIRVQGRAALGSQSLGA
VSLLLLVLAWMNLGL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgggagggggcgtcgccatggctgctccagtggtgctcctgtcgatcctctcctctttg
ctgttatcagctgatgcaatcaagcccaggttctttgagcccagaatctttgacaaggag
gccacaggttttgggcccatattcgaggaggagcctcttgacacagtgtacgccgaggat
tcacctgaagccaaaatttccatgaactgcagagttcgcgccaatccaccagccactatc
aagtggtggcataacaactgggagattaaactgatggagcagccagatgagcactacagt
ttagtgggtggaaacctggtcatcacgaacccagaaaagagcaagcatgctgggaaatat
gtgtgtgtggccaagaacgtttatggcactaccatcagcaaagaggctactgtcaaattt
gggtatctggaccagtttcccactgatgagagagaggctgtgtatgttaaagaaggacag
ggggccgtcctcttgtgtgctccaccctctcgctatccagctgaggtgatgtaccgatgg
atctataatgatttccccaatttcattatccctgatcagagacgctttgtgtctcagagc
actggaaatctctatattgctaaagtggaggcttctgatgtcggcaactactcctgcttc
gtgtccagccccaccatcggcaagagtgtcttcagcacccctatccctttagtgccacag
acggagaaggaggtgaagcgatatcctgcagacatccgggtcagatttccgaagacgtac
gctttggtggggcaaaacgtgacactcgagtgctttgccttgggaaatcctctcccacac
atccgctggaggaaactggatgccgacctgccgcccaactatgaggtgagcatgaatggg
gcgctgctgcacctcatcaacgtgcagtacgaggacgagggcagctacgagtgtgaggcc
ctcaacgtcagaggcatggactggtaccggcagtggctctacgtggagggtgctccagag
tgggcggagcatattaacgacactgagaaagatgttggcagtgagcttactctgtcctgc
actgctgtgggaaagccactaccatggatacgctggttgaaggatggctactcttatggc
aaaggagagctgaagttctccagtctcacgtttgaagattcaggcatgtatcagtgcatt
gctgagaacacctggggaaccatctatgccaatgcagagctccgggtggtctcttgtgct
cccacattcatatacaacccagtgaagaagactctgttgggtgctgaaaatggccgtgtg
gttatcgagtgtaaacccagagcggctccgaagcccaggtttatctggaaacgtggctct
gaactgctctccaactcctcccgtatgtttatctgggatgatgggagtcttgagatactg
aacgcgacaaagagtgatgagggctcgtatacgtgttatgctgagaatgaccgtggcaag
gccaacagcacaggcaccctcagcatcaccgaggctactaagatcacagtacccccctcg
gatgtggaggtaatagtgggagagactactgtccttcagtgctctgcctcatatgactcc
agcctagacatcaccttcatctggacagtggactcttacatcatcaactttgccaccgac
tttgaacactatgagcagatgatgggtcgggagaacagcggagacctgctgattaaaaac
attcagatcagtcatgcaggggagtatatctgcacagcacagaccatcgttgacaatgct
actgcatccgctaacgtttttgtccaaggtcggccaggtcctccaggcggcgtgcgagtg
gaagaaatcagagacacatcagtgaagcttgtatggagtttgggctcagaccatggcagc
cccctcactcaacatgttgtacagactcgagacttctatgctcttgatcctgaggactgg
aagactgcagtcacctctcctgttttcttggatggaaaaactgagacggcagaggtggtt
gatctgtatccctggatggaatatgaatttcgtgtgtatgccgtcaatgagctgggagca
ggagagagcagcctgccctcaattaaaatcaaaacctgggatgctattcctaccatgtct
cccactgatgtcgatggctatgtgggcctgaatggggagctcatcgtcacctggactccc
atgaaacctcagtacttctttggtaaaaagtttggctatgtagtggcgtttaagccccat
gaggactttgactggaagtggtcaactgtagcagatccggaggccagacgctttgtttac
aaggacaccatcatccccaacactgagatccaggtcaaagtgaaaggctacaacagcaaa
ggagaggggccatacagcttgaccaaagtagtgtactcatctgaaagcgcgcccactgaa
gcaccgctggacgtgtatgcccgtcaggtcacctctacagaggctcttgtgtggtggctg
cctgtctaccaggttcctcctcactgggtggatggctaccagattcgctactggaggaag
tatgatgacaacgaagcggctgcctctcgtgttctggtgcacagttcggttaaccagact
cgcctggagaacatgcggccggactcacactaccttatagaggtacgggcctacaatgga
gccggactcgggccacccagtgagcactgtgagatgttcaccaggagaccacctccaaat
cgtcgtctgagggtgtacaagtatgtcagctttacacgcaaatggctctatatctactgg
gatcacatctacaattactggaatgagtcttatgtagagggttacaagatcttgtttagg
aaggaaggggagcgctatgggaaactgtacaccaccggcaggcactacattgacttccct
atgcctgagacaggcgattacgtgattgaaataagggctcgctgtgagggaggagatggc
cctatatcacagatacgtgtgcaaggtcgagctgcacttggctctcaatctcttggtgct
gtctcactcctgctgctggtgcttgcctggatgaaccttggtctgtag
DBGET
integrated database retrieval system
