Colossoma macropomum (tambaqui): 118812119
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Entry
118812119 CDS
T09004
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmao00535
]
118812119
Proteoglycans [BR:
cmao00535
]
Extracellular matrix (ECM) proteoglycans
Others
118812119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
NDNF
Fn3_nematode
DUF4959
vWA_SIBA-E
CRLF2-like_D2
Motif
Other DBs
NCBI-GeneID:
118812119
NCBI-ProteinID:
XP_036432748
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MRMRMRMQARGSSMLFLLALTSLLTGPTQGQVPAPRRLRFKELGSGMLTVSWKEPKGEFD
SYRLTYSSGRQEREVQVTKEEAKFVISDFDYSKEYTFKIIALNGGQQSKPLLGSYKASRS
EVTDSSLQTHRERQNSEPEQDNEISEVDVFVCKTPAIADIVILVDGSWSIGRINFRLVRM
FLESLVNAFSVSSDQTRIGLAQYSGDPRIEWHLNTHSTKDAVINAVKNLPYKGGNTLTGL
ALMFILENSFKPESGSRTGVPKIGILITDGKSQDDVQGPARSLREAGIELFAIGVKNADE
NELKAIASPPSETHVYNVADFSVMSSIVEGLTRTVCGRVEQLNKEIHGQGGPSTTPAAPR
DLVTSEVTARSFRVSWTHAPGTVEKYRVVYYASRGAQPEEVVVNGDQNSVVLQHLNSLTE
YQVAVFAVYSNSASEALRGSMTTLALPMVNNLELYDITHSSMRVRWRAAEGASGYMILYA
PLTEGDAADEKEVKVADTVTEIELEDLTPATEYTVTVYAMYGDEASDPRTGQETTLPLTP
ARILRISDVSHSSAKLTWEAASRKVNGYRIMYVKTDGVQTNEIEVGRITTLLLSNLTSLT
EYTVAIFAIYDEGQAEPVTDSFTTNSVPSPLSFRSSDVGTDRFRVSWQHAASDVTLYQLT
WTPASGGETRESVISGNSNSYVITGLTPLTEYEVALTAVYRDERESDALQLSQTTAARTT
TVATTTTTTTTAVIRVGVRGLQLSDFTTFSMGVSWELLGSNVRQYRVSYITARGDRAEQV
TMVPGNQNSVVLQPLLSDTDYRVGVTAVYADGDGPTVTRSARTLPLSAPKNLRVSEEWYN
RFRITWDTPPSPTMGYRIVYQPVSAPGRALETFVGDDVNTILILNLLSGTEYSVKVIATY
TTGSSEALTGRARTLYLGVTNLNTYQVRMNSMCAQWQPHRHANQYRVVIESLLNGQKQEV
QLDGSASRHCFNDLSPNTQYKITVYAQLQDTEGPAVTTIQKTFPVPTTPPTRPPTTTPLP
TIPVAKEVCRAAKADLVFLVDGSWSIGDDNFVKIIRFLYSTAGALDEIGRGGTQVAIAQF
SDDARTEFKLNSYDNKESLLDAIQRISYKGGNTKTGRAMQHVKDSIFTVAGGSRRGVPKV
LVVLTDGRSQDDVNKISQEIQMEGYIVFAIGFADADYGELVSIASKPSERHVFFVDDLDA
FKKIEEKLITFVCEAATATCPSVPMSGSTLPGFRMMEMFGLVEHLYSNLEGISMEPGTFN
SFNSYRLASDALLAQPTRYIHPEGLPSDYTITMLFRLLPETPQEPFALWEILNSRNEPLV
GVILDNAGKTLTFFNNDYKGDFQTVTFEGPEIKKLFYGSFHKLHIAVSKTLAQVMVDCNL
AGEKPINAAGNITTDGLEVLGRMVRSRGAKDNSAPFQLQSFDIVCSTSWARRDKCCDLPS
LRKEADCPALPRACTCTQDSKGPPGPPGPQGGAGIRGAKGDRGEPGPVGPVGPMGDAGIP
GPQGPPGPQGPSGRSIRGPPGGPGERGEKGEAGARGPQGVPGTPGSPGREGPPGPRGLLG
KDGPQGRVGPPGSIGGPGAPGAPGQNGPPGPIGEQGPPGPAGSKGEKGERGDIQSTSSVQ
AIARQVCEQLIQSHMARYNSILNHVPSQPVSIRTVAGPPGEPGRQGPPGQQGEQGPPGRP
GFPGTNGENGQPGSRGSPGEKGEKGSPGVGVQGPRGPQGPPGPPGEGRAGGPGPAGRPGN
SGTPGRPGMPGPVGPAGPPGYCDPNACGYNVGEREIDPEVTDSDIPVVQLPPNSYPPYNP
EEEGEEDPYGSYGTYPSYYQPNYPQPRPVEPDDPVIAEEMEELRSPGIQRRTRSVAERRR
VKKETQE
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaggatgaggatgcaggcgcgcggcagcagcatgctcttcctcctggcactg
acgtcactgctcaccggacccacccagggccaagtgcctgctcctagaagattacgtttt
aaggagctaggctcaggcatgctcactgtgtcctggaaggagccgaaaggagagtttgac
agctacaggctcacctacagctcaggacgtcaagagagagaggtccaggtgaccaaagaa
gaggccaaatttgtgatttcagactttgactacagtaaagagtacaccttcaaaatcatc
gccctcaacggcggccagcagagcaaaccattactgggcagctataaagcgtcaaggtca
gaggtcactgacagcagcctgcagacacacagagagaggcagaacagcgagcctgagcag
gacaatgagatcagcgaagtagacgtgttcgtgtgtaagactccagcgatagctgatatt
gtgattttggtggatggctcttggagtattggccgcattaatttccggctggtgcgcatg
ttcctggagagcctagtgaacgctttctctgtcagctctgaccagacacgcatcggattg
gcccagtacagtggagaccccaggattgagtggcacctgaacacacactccaccaaagat
gctgttatcaacgctgtgaagaacctgccctataaaggaggaaacactctaacaggtctt
gccttgatgttcattttggagaacagctttaagcctgagtccggatccagaacaggcgtt
ccaaaaatcgggatattaatcacagatgggaaatctcaggatgatgtccagggccctgca
cggagcctgagggaggcggggatagagctgtttgctattggtgtgaagaacgctgatgaa
aatgagctgaaggcaatcgcgtcccctccatcagagacccatgtgtataacgtggctgac
tttagtgtgatgagctcaattgtggaggggctgacccggactgtgtgtgggcgtgtggag
cagcttaacaaggagatccacggtcaaggaggcccgtctacaactcctgccgcacctcgt
gaccttgtgacctctgaggtcacggccaggagttttcgagtgtcctggactcacgctccc
ggcactgtggagaagtacagagtggtgtactacgcctccagaggagcccagccagaggag
gttgtagtgaatggtgatcagaattcagtcgtgctgcagcacctcaactctctgactgaa
tatcaggtggctgtgtttgctgtctacagtaactctgccagtgaagcgctgagaggcagc
atgaccaccctggccttgcccatggtgaataatctggagttgtatgacatcacacacagc
agcatgcgtgtgcggtggagagctgcagaaggggcttcagggtacatgatcctgtacgcc
ccactgactgagggagacgcagcagatgagaaggaggtaaaagtagcagacactgtgact
gagattgagctggaggatctgactcccgcaactgagtacacagtcactgtctatgccatg
tatggagacgaagccagtgaccccaggaccggccaggagacaacccttcctctaactcct
gcccgtattttgcggatcagcgatgtgtctcacagctctgcaaagctcacctgggaggca
gcgtctcgtaaagtgaacggctaccgcatcatgtatgtgaagacggatggtgttcagacc
aacgagattgaagtaggccgcatcaccacactgttgctaagcaacctcacctctttgacg
gagtacacagtggccatctttgccatctatgatgagggacaggctgaacctgttactgac
agcttcacaactaactcggttccatcgccgctgagtttcaggagcagcgatgtcggcaca
gaccgtttcagagtgagctggcaacacgcagcgtctgatgtcactctctaccaactcacc
tggacgcctgcgagtggaggagagaccagagagtctgtgattagtggtaattcaaactct
tatgtgattactggtctgacgcccctgacggaatacgaggttgcattgacggccgtctac
agagatgagagagagagcgatgcacttcagctcagccagaccacagctgctagaacaaca
actgtggcaaccacaactaccaccacaactacagcagtcattcgtgtgggcgtgaggggt
ctgcagctgagtgatttcactacgtttagcatgggtgtgtcgtgggagctgctgggctcc
aacgtgcgtcagtacagagtctcctacatcacggctcgtggagatcgggctgaacaggtg
acgatggttcctggcaatcagaattcagttgtgctgcagcctttgctgtcagatacggac
tacagagtgggtgtaacggccgtttacgcagacggagacgggccgactgtcacgcgctct
gctcgcaccttgcctctctctgctcctaagaatctgagggtatcagaggaatggtacaat
cgcttccgcatcacctgggacacgcccccttctcccaccatgggctacaggatcgtctac
cagcctgtctcagcaccaggtcgagccctggagacatttgttggagacgacgtgaacacc
attctaatcctaaacctgttgagcgggacagaatacagtgtaaaggtcatcgccacgtac
accaccggctccagcgaggcgctcaccggcagagccaggacactttacctgggcgtgact
aatctgaacacctatcaggtgcgaatgaatagtatgtgtgctcagtggcagcctcatcgc
catgccaaccagtaccgtgtggtcatcgagtcattactcaatggtcagaagcaggaggtg
cagttggatggctccgcttcgaggcactgctttaatgacctgagtccaaacacacagtac
aagatcactgtctacgctcagctgcaggacacagaggggccagccgtgaccaccatccag
aaaacatttcctgtacccaccactcctcccaccaggcccccaaccaccacccctctaccc
accattcctgtagctaaagaagtatgcagagcagcgaaggctgatctggtgtttttggtg
gacggatcttggagtatcggtgatgataactttgtgaaaatcattcgcttcttgtacagc
acggctggagcgctggatgaaatcgggcgtggaggcacacaggtggccatagcccagttc
agtgatgacgcccgcactgagttcaaactgaactcctatgataacaaggagagtctgctg
gatgccattcagaggatttcatacaaaggaggaaacactaaaacaggacgagccatgcag
catgtgaaggacagtatcttcacggtggccggaggaagcaggcgaggcgtgccgaaagtg
ctggtggtcctgacagacggccgttcccaagacgatgtcaacaagatctcccaggagatc
cagatggagggttacatcgtgtttgcgatcggttttgctgacgctgattacggggagttg
gtgagcatcgccagcaaacccagcgaaaggcatgtgttctttgtggacgacctggatgcc
tttaaaaagatcgaagagaagctcatcactttcgtgtgcgaagctgctacagcaacttgt
ccatctgtaccgatgagcggcagcacgctgccaggctttaggatgatggagatgtttggt
ctggtggagcacctgtacagtaatctggagggcatttcaatggagccaggaaccttcaac
agcttcaacagctacagactagccagtgatgccctacttgcacaacctaccaggtatatc
caccctgagggtctgccatctgactacaccatcaccatgttgttccgcctgctgcccgaa
accccacaggagccctttgcgttgtgggagattctcaacagcagaaatgaacccttagtg
ggagtcattctggacaatgcaggaaagacactgacgttcttcaataatgactataaaggt
gattttcagacagtaacattcgagggccctgagattaagaaacttttctatggcagcttc
cacaagctgcatatagcggtaagtaagacgctggcacaggtgatggtggattgtaatctg
gctggagaaaagcccataaatgccgctggcaacatcaccactgatggactggaggtcttg
ggcaggatggtccgctccagaggggccaaggacaactccgcaccgtttcagctgcagtca
tttgatattgtgtgtagtacatcgtgggctcggcgagacaagtgctgcgatcttcccagt
ctgagaaaggaggcagactgccccgctctgcctcgggcctgcacctgcactcaggacagc
aaaggccctcctggtcccccaggaccacagggaggtgctggtatcagaggggcaaaagga
gatcgtggcgagcctgggcctgtggggccagttggtccaatgggagatgctggaatacca
ggacctcagggccctcctggcccccaggggcccagcggacgatctatcagaggcccaccg
ggtggcccaggtgagagaggggagaaaggtgaagcaggagctcgagggcctcagggagtt
ccaggaacaccggggtctccaggacgggagggccctccaggacccaggggtttgctgggc
aaagacggaccccagggcagagtgggtcccccaggaagtattggaggtccaggggctcct
ggagcaccaggccagaatggccctcctggacccatcggagagcagggacctccgggccct
gcaggctccaaaggggagaaaggagaacggggggatatacagtctacttcctcggtccaa
gccatcgccagacaagtctgtgaacagctcatacagagtcacatggcccgctataactcc
atcctgaatcatgttccgagtcagccggtgtcgatccgcacagtcgctgggcctcctgga
gagccaggccgtcaaggtcctccgggacagcagggagaacagggtcctcctggccggcca
ggatttcctggaactaacggagagaacggtcaacctggatccagaggttctccaggtgaa
aaaggagagaagggaagcccaggtgtgggtgtccagggccccagaggacctcagggacct
ccagggccacctggtgagggaagggctggtggtccaggccccgctggtcgccctggtaac
tccggaactccaggcaggccgggcatgcctgggccagtaggacccgccggacctccgggc
tactgcgatccaaatgcttgcggatacaacgttggagagagggaaattgaccctgaagtg
actgacagcgatattcccgtagtccaactgccgccaaactcgtacccaccttacaaccca
gaggaagaaggtgaggaggacccttacggcagttacgggacgtacccctcctactaccag
cccaactacccccagccccgccccgttgagccagacgacccggtcatagcagaggagatg
gaggagctgcggtcgccagggatacagcggcgaactcgcagcgtagcagaacggaggagg
gtcaaaaaggagactcaggaatga
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integrated database retrieval system
