Colossoma macropomum (tambaqui): 118812348
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Entry
118812348 CDS
T09004
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04510
Focal adhesion
cmao04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118812348 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118812348 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
118812348
NCBI-ProteinID:
XP_036433192
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MWMLQAATILTLGLGVLAQYFPDHSDKCTEGSCYPATGDLLIGRAHKLTASSTCGLNGPE
TYCIAGKCFVCDSREKYNEYTYPNSHTIDNVVTTFTPNRLKTWWQSQNGEENVTIQLDLE
AEFHFTHIIMTFKTFRPAAMVIERSADHGQSWKVYRYFASDCSASFPYISQGPVINVDDV
ICDSRYSDMEPSTEGEVIFRALDPVFKIPDPYSQQIQNLLRITNLRVSMLQLHTLGDNLL
DGREDVKQKYYYAIYDMVVRGSCFCYGHASECAPVRGIETSEEGMVHGLCLCKHHTTGLN
CEECQELYQDVPWRPAEGRNTNACKRCECNHHSDKCHFDMAVYLSSGNMSGGVCDNCQHN
TQGQHCESCKPFFYQHPNRHLRDPHICEPCDCDPRGSLNGGVCDSVTDVLRGMVAGQCRC
KPNVEGERCDYCKQAHYGLSEDPQGCLSCSCNPLGTLPGGNQCDAATGDCYCKRLVAGRY
CNQCAPQHWGLSNDMDGCRPCDCDLGGALNNNCSPVTGQCVCREHMFGRRCDQVESGYYF
AALDHYIYEAEDAAFKPEVKVVPRPLPVDRQPTWTGTGFANVPEGEKISFTIDNVPQSME
YTLLIRYEPQLPDVWEQVMVDVVRTGFPSPSAHCSPPYADQQSVSLPPGYRYVVLSRPLC
LEKGQNYTVEMLLALYSSSDLHHHPHMFIDSIVLLPVVRDLELFSGSADRQAAWEMFQKY
RCLERSQSVQKTPMTDICKEYIFSASALLHQGAMECQCDLRGSLSLVCDSIGGQCPCRPN
VMGKKCDTCAPGTFQLGPSGCRSCECDSLGSQNAFCHATTGQCTCLPGVYGPNCAHCLPN
HWGFPHCQPCFCNGHSQHCHPHTGQCLECTDHTTGPHCERCENGYHGNALLGSGERCRPC
MCPDGPGSGRQFADTCYHKPNSLQLVCVCSPGYKGPRCEECAPGFYGNPEVVGGRCHPCQ
CNGNIDMHDPGSCDSRTGVCLKCLFHTEGHRCQHCSPGYHGDASTQSCQKCMCLPLGTAA
HSCVDGECECDRVSGQCACLPGVEGLHCDHCAPNTWNINSGDGCQPCQCHPTHSYSLSCD
LLSGQCSCKPGFGGRTCEECRELFWGDPEVKCYACDCDPQGIATPQCNKMTGRCVCVEGV
TGQRCDSCGRGYVGTFPDCQRCHQCFSDWDVTVGELTNQTQRLADTVDDLKVSGVTVAYQ
DTISSLEGGAKQLTQIIEDNKAQQTLTHSQNLLQQANEMKLALEHSLNRSEATVNQVSAE
HAKAVDELNTLTQEAQRLQDSTEEKQQQVLHIKHSDLRGAADSIREYYQQSVDAESRATQ
ATTDPLSPVEQSTGLRQAAETTLNAIQAEFELKQRLQGERLDKLNKELEQDDLSKHSYQV
CGGVSGPDSCGDCGGLGCVGEDGVPQCGGENCQGLITKSSEMWSKAKDLDQDILNSLKEV
EKLHRMVSDARGRADEAKHSAHDVLLKANQSKARVEQTNQELRELIQEIRDFLTNGTNLE
RIEALADEVLKLRMPVEAHELKNITMEIRQHVANLTSVDNILAESADQARIAERLLQQAR
TISEKASELKEEADGVKTALSESEHAQTAANDSLKAAKSDLDNTQQQLASVESETAASEF
KLSNGTQRLLDLEKGVRVVREKTLETSNIADVTKRQTDYISEDTAQTKRALELEVEPNFK
LVSGLIEQKAVGVSMARERAMQLQQEAKDLLEDATSKLQKLRELERDFSVNQRTLAERAE
ELKRLEKAAEDILLELSQKVTGYSTCL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttacaggctgccaccattctgactctgggtttgggagtcctggctcagtat
tttcctgaccacagtgataaatgtacagaggggagctgttacccagccactggggacctg
ctgatcggcagagctcacaagctcacagcctcatccacctgcggcctaaatggaccagag
acctactgcatcgctggaaagtgttttgtgtgtgactctcgagagaagtacaatgagtac
acataccccaacagccacaccatcgacaacgtggtcacaaccttcactcccaacaggctc
aagacatggtggcagtcccagaacggagaggagaacgtgaccattcagctggacttggag
gctgaattccacttcacacatatcatcatgacctttaagacatttcgtcctgcagcaatg
gtgatcgagcggtcagcagatcatggccagagctggaaggtgtaccgttattttgcatcc
gattgctccgcatcctttccatacatctcccagggtccagtcatcaatgttgatgatgtc
atctgcgattcacgctactctgacatggagccttcaacagaaggagaagtcattttcaga
gctcttgaccctgtgtttaagattcctgacccctatagccagcaaatacagaatctgctg
agaataacaaacctccgtgtgagcatgctacagttacacaccctcggtgataacctgctg
gatggccgtgaggatgtcaaacagaagtattactatgccatctacgacatggtcgtccgt
ggcagctgcttctgttatggccatgcctccgagtgtgcaccagtcagaggaatcgagaca
agtgaggaagggatggttcacggcctctgtctgtgcaagcatcacactactggactgaac
tgtgaggagtgtcaggagttgtatcaagatgtgccctggagaccggcagaaggccgaaac
accaacgcgtgcaagagatgtgagtgtaaccatcactctgacaaatgtcactttgacatg
gccgtctatctgtcgtctgggaacatgagtggaggagtgtgtgataactgtcaacacaac
acacagggccagcactgtgagagctgtaagcctttcttttaccagcaccccaacagacat
ctccgagaccctcacatctgtgaaccatgtgactgtgacccacgcggctctttaaacggc
ggtgtgtgtgacagtgtgacggacgttctgaggggtatggttgctggacagtgtcgctgt
aagcccaatgtggagggagagcgctgtgattactgcaagcaggcacactatggactcagc
gaagacccacagggctgtctgtcatgcagctgtaaccctctgggcacactccctggagga
aaccagtgtgacgcagccactggagactgctactgcaaacgtctcgtcgccggccgatac
tgcaaccagtgtgctcctcagcactggggtctcagcaatgatatggatggctgccgacca
tgtgactgtgatctgggcggggctttgaacaacaattgttctccagtgacagggcagtgt
gtgtgtagagagcacatgtttggcaggcgctgtgaccaggtggagtctggctattatttt
gctgccctggatcactacatctacgaggctgaggatgcagcattcaaaccggaggtgaag
gttgtccctaggccgctgcctgttgatcgtcagcctacctggactggcactggctttgca
aacgtgcctgaaggagaaaaaatcagtttcaccattgacaatgtgccgcagtcaatggaa
tacaccctgctgatccgctacgaaccacagttgccagatgtgtgggagcaggtgatggtg
gatgtagtgcgcactggcttcccctcaccatctgcacactgttcacctccttatgctgac
cagcagagtgtttcactgcccccaggatacaggtatgtggttctgtccagaccactgtgt
ttagaaaaaggacagaactacacagtggaaatgttactggccctttattcatcaagtgat
cttcatcatcatccacacatgttcatcgactctatcgtgctgctgccagtggtgagggat
ttggagttgttctcagggtcagctgaccgacaggcagcatgggagatgtttcaaaagtac
cgctgtctagagcgaagccagagtgtccagaaaacccctatgactgacatctgcaaagaa
tacatcttcagtgcatctgccctgctgcaccagggggcaatggagtgtcagtgtgatctg
aggggctcgctgagtttggtatgtgactccatcggtgggcagtgtccatgtcggccaaat
gtgatgggaaagaagtgtgacacctgtgctcccggcaccttccagctcggaccctccggc
tgcagatcatgtgagtgtgactcgttgggctcgcagaatgccttctgccacgccaccaca
ggccagtgtacatgtctaccaggtgtttatggccctaactgtgcccactgtctgccaaac
cactggggcttccctcactgccagccgtgcttctgcaacggccacagccaacactgccac
ccgcatacaggacagtgcctggagtgtacagaccacaccactggaccccactgcgagagg
tgtgagaatggttaccatggcaacgcactgctaggcagcggggagcgctgtcggccctgt
atgtgccctgatggcccagggagtggcagacagtttgctgacacctgctaccataaaccc
aactcactccagctcgtctgtgtttgcagtccaggatataaaggacccaggtgtgaggaa
tgcgctcctggtttctatggcaacccggaggtggtgggtggacggtgccacccttgtcag
tgtaacggaaacatagacatgcatgacccggggtcctgcgactcccgcacgggcgtctgc
ctcaaatgcctgtttcacactgagggccacaggtgccagcactgcagccctggttaccat
ggagatgccagcactcagagctgccagaagtgtatgtgcctgccattgggcactgctgct
cacagctgtgtggatggtgagtgtgagtgtgatcgtgtgagtggtcagtgcgcctgtctg
cccggagtggagggactccactgtgatcactgcgcccccaatacctggaacattaacagt
ggagatggctgccagccatgccagtgccaccccacacactcctacagcctctcctgtgat
ctgctgtcgggtcaatgctcctgtaagcctggttttggtggcaggacatgtgaggagtgt
agagaactgttctggggtgatccagaagtcaaatgctatgcgtgtgactgtgacccacaa
ggcattgctactccacagtgtaacaagatgacaggcaggtgtgtgtgtgtggagggtgtg
actggccagcgctgtgactcttgtgggcggggctatgtaggaacatttccggactgccag
cgatgtcatcagtgcttcagcgattgggatgtaacagtgggagagttaaccaatcagact
cagaggctggcggacaccgtggacgacctcaaagtgtccggcgtgacagtggcctatcag
gacacaatatccagtctagaaggtggagccaagcagctcactcagataatagaggacaac
aaagctcaacaaaccctcacacactctcagaacctactgcagcaagccaatgagatgaag
ttggctctggagcactctctgaaccgttcagaggcaactgtgaatcaggtttctgcagaa
catgccaaagctgtggatgagcttaacacattaactcaagaggctcagagactgcaagac
agcacagaggagaaacagcagcaggtgctgcacatcaaacactctgacctccgcggtgca
gcagacagcattagagaatattatcagcagtcagtggatgcggagagtcgagccactcag
gccaccactgaccccctcagcccagtggagcaatccacaggcctacggcaagccgcagag
accacactaaatgccatacaggcagagtttgagctgaagcagcggctgcagggtgagaga
ctggacaagctgaacaaggaactggagcaggatgacctgtcaaaacacagctatcaggtg
tgtggtggggtgtctggcccagatagctgtggagactgtggaggtttggggtgtgtaggt
gaagacggagtgcctcagtgcggtggtgagaactgtcagggtttgatcacgaagagcagt
gaaatgtggagcaaagctaaagacctggaccaggacatcctgaactcactgaaggaagtg
gaaaagctccacaggatggtgtctgatgctcgtggccgtgcagatgaggctaaacacagc
gctcatgatgtcctactaaaggccaatcagagcaaagctagagttgagcagaccaatcaa
gagctacgagagctaattcaggaaatacgagactttcttacaaatggaacaaatctggag
cgtattgaggctctggctgatgaggtgttgaagctgaggatgcccgtggaggcccatgag
ctaaagaatataaccatggagattcggcagcatgtggcaaatctgaccagtgtggacaac
attcttgctgaaagtgctgaccaagcccgaatagccgagaggttgctgcaacaggcacgc
accatcagtgaaaaggcctccgagctgaaggaagaggctgatggggtgaagactgcatta
agtgaatctgagcatgctcagactgcagccaatgacagcctgaaagcagccaagagtgac
ctcgacaacacacaacagcaattggcctctgtggagtcagagacggctgcatcagagttt
aagttaagtaatggcactcagcgtttgcttgatctggagaagggtgtccgtgtggtcaga
gagaaaactctggaaacctccaacattgcagatgttactaagagacaaactgactacatc
tctgaagacaccgcgcaaaccaaacgggcgttagagttggaagtggaacctaacttcaag
ttagtgagcggactgatagagcagaaggcagtgggtgtatccatggcacgtgagagggca
atgcaactacagcaggaggcaaaggaccttctggaagatgctacaagcaaattacagaaa
ctaagagagctggagagagatttctcggtaaaccagcggactctggcagagcgcgcggag
gagctgaagcgcttggagaaggcggccgaagacatcctgcttgaacttagccagaaagtt
acaggctacagcacctgcctgtag
DBGET
integrated database retrieval system