Colossoma macropomum (tambaqui): 118812364
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Entry
118812364 CDS
T09004
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118812364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmao02000
]
118812364
Transporters [BR:
cmao02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118812364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118812364
NCBI-ProteinID:
XP_036433219
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MEESRGGDTPNGPAADSHKEYQPSRPEPREKWSNKTEFLLSMAGEIIGLGNVWRFPYLCY
KNGGGVFFIPYFVFLIFCGIPVFFLETALGQYTSEGGITAWRKICPMFEGVGVASQVIVI
YLNIYYIVVLAWDVFYFFNCFRSSLPWTTCDHVWNTDSCHTFNRSLLSSGLHRPDSDWSF
LYNVTDSYDIDNYSSNSSFSETLPYEVVSPEEEFWLNQVLRVTSDDSLGLPHYDLTGCLL
LVWTICYFCIWKGVKVTGKVVYFTAMFPYLMLLILFFRGVTLPGAGQGIAYYLYPDISKL
TNPDVWRDAGTQVFFSYAVCQGVLTALGSYNKYHNNCYKDCIALCALNSGTSIFAGFAVF
SILGYMSHELSLPMENIVRSGPGLAFIAYPKALSLLPSPQLWSLLFFLMILFLGLDSQFV
CVESLATALTDVFPGVLRKPRRREILVLVIAVVCFLLGLPLVTGGGIHLFVLIDTYGPSG
TNLLYIACFETIVIAWVYGADRFYDNIKDMIGYTPMPVLKYCWLFITPLICGATLLYDLV
VSSPVNSNFGPSWGSTIAALLTLTPMLCVPAFVLISLRRGPGQISPSPDLQQASPHKPRL
TLCKRVIIKRQRLLHRGGDKGGEAEKAITEDTNEV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcagaggaggagacactcctaatgggccagctgcggactctcacaaagag
tatcagcccagtagaccagagcccagagagaaatggtccaacaagactgaattcttactg
tcaatggctggagagatcataggcctgggcaacgtgtggcgcttcccttacctgtgctac
aagaatggaggaggtgtattcttcatcccttactttgtcttcctcatcttctgcggcatc
cctgtatttttcctggagacggctttgggccaatacaccagtgaaggagggatcacagcc
tggaggaaaatctgtcctatgtttgaaggagttggagttgcctctcaggttatagtcatc
tacctgaacatctactacattgtggttctggcctgggatgtcttttacttcttcaactgc
ttccgaagcagcctgccctggaccacctgcgaccatgtgtggaacacagacagttgccat
actttcaaccgaagcctgctgtcctcaggcctgcacagaccagactctgactggtccttc
ctctataatgtaactgatagctatgatatcgacaactacagcagcaattccagcttctct
gaaacgctgccatatgaagttgtttccccagaggaggagttctggcttaatcaggtgctg
agggtaaccagtgatgattccctgggcctgccacactatgatctaacaggatgtctcctg
ttggtctggactatctgctacttctgtatctggaaaggagtgaaggtcactgggaaggtg
gtgtatttcacagctatgtttccgtacctcatgctgctgatcctgttcttcagaggggtc
actctccctggtgctggacagggcattgcctattacctttaccctgacatctccaaactc
accaaccctgatgtttggcgtgatgcaggcacccaggtgttcttttcttatgctgtgtgt
cagggtgtcctcactgcattgggcagctataacaaataccacaacaactgctacaaagac
tgcatagctctctgcgctttgaacagcggcaccagtatctttgctggcttcgctgtcttt
tctatccttggctacatgtctcacgagctgagcttgcctatggagaacatagtgagatca
ggtccaggcctggcttttatagcctaccccaaggcactgtctctcttaccaagccctcag
ttatggtctctccttttcttcctaatgattctcttcctaggactggacagtcagtttgtg
tgtgttgaaagtctggccacggcgctcactgatgtgttccctggagttctgaggaagccg
aggcgcagagagattttggtgctggtcatcgctgtggtctgcttcttgctgggccttcct
ctcgtcaccgggggtgggatccacctgtttgtgctgatcgacacatatggtccaagcgga
acaaacttgctctacatcgcctgctttgaaaccatcgtcattgcctgggtgtacggtgcg
gatcgtttctatgacaacatcaaggacatgataggatacacccccatgcctgtgctgaag
tattgctggctcttcatcaccccattaatctgcggagccacactgctgtatgatcttgtt
gtaagtagtccagttaactccaactttgggcccagctgggggtccacgatagctgccctg
ctcaccctcactccaatgctctgtgttcctgcatttgtactgatatctctcagaaggggt
cctggtcagatctccccatcgcctgacctgcagcaggccagcccacacaagcctcggctg
acactgtgtaagcgagtcatcattaagagacagaggctcctccacagagggggagataaa
ggtggagaggcagagaaagccatcacagaggacactaatgaagtgtga
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