Colossoma macropomum (tambaqui): 118812513
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Entry
118812513 CDS
T09004
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118812513 (mkrn1)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118812513 (mkrn1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118812513 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
118812513
NCBI-ProteinID:
XP_036433474
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAEAAAAPTAAPIAAGGWTKHVTCRYFMHGLCKEGDNCRYSHDRSSSKPAMICKFFQKGC
CAFGDRCRYEHTKPAKQEELPGPMPSVPLPAALLALAGAPDSVPSGPGGTPDAQERPHSS
GAVDWVNAAEFVPGQPYCGRADTVFVEGPGPLIEDEYEKEQADKELKKQLCPYAAVGECR
YGLNCAYLHGDACDMCGLQVLHPSDTAQRSQHIRACIEAHEKDMEISFAIQRSKDMMCGV
CMEVVFEKANPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIP
SEYWVEDKEEKQNLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEEAQPQ
SQNQPQSQRRQTGSNGRNRNSRRTPLWDLFDERESSDSLDNDDEEMVTFELSEMLLMLLA
AGTDDDVTDSEDEWDLFHEELDDYYELSL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggcacctacagcggctccaatagcggcgggaggctggacgaaa
cacgtaacctgcaggtatttcatgcatggtctttgcaaagagggagacaactgtcggtac
tctcatgaccgtagcagcagcaagccagccatgatctgcaagttctttcagaagggttgc
tgtgcgtttggagaccgttgcaggtatgaacacaccaaaccggccaaacaagaggaactc
cctggccccatgccatcggtgccgcttcctgctgccctccttgcccttgctggtgcccct
gattctgtgcccagtgggccaggtggcacgcccgatgcccaggaaaggccccacagctcc
ggggcagtggactgggtcaatgccgctgagttcgtgccaggccagccctactgtgggagg
gcagacactgtgttcgtggaaggtcctggacctctcatcgaggacgagtatgagaaagaa
caagccgacaaggagctgaagaagcagctgtgcccgtatgccgcagtgggtgagtgccgc
tatggcctcaactgtgcctatctgcacggcgacgcgtgtgacatgtgcggcctgcaggtg
ctccatccgtccgacaccgctcaacgctctcagcacatcagagcgtgtatcgaggcccat
gagaaagacatggagatttcgttcgctattcagcgcagtaaggacatgatgtgtggcgtg
tgcatggaagtggtgttcgagaaggccaaccccagcgagcgccggttcggcatcctgtct
aactgcagccactgctactgcctcaagtgcatccgcaagtggaggagtgccaagcagttt
gagagcaagatcataaagtcctgcccagagtgtcgtatcacgtccaacttcgtaatccca
agtgaatattgggtggaagacaaagaggaaaagcagaatctcatccagaagtacaaggat
ggcatggggagtaaaccatgccgatattttgatgagggccgtggaacctgtcctttcgga
gctaactgcttctacaagcatgccttccctgacggacgcctggaggaggcccagcctcaa
tctcaaaatcagccccagtctcagcgaaggcaaactggctccaatggaaggaacaggaac
tcgaggcgtactccgctctgggacctctttgatgagcgggagagcagcgactccttggat
aacgatgacgaggagatggtgacgtttgaactcagcgaaatgctcctcatgctcctggct
gcgggaactgatgacgatgtcaccgactctgaagacgagtgggacttgtttcacgaagag
ctggacgattactacgagctctccctatag
DBGET
integrated database retrieval system
