Colossoma macropomum (tambaqui): 118813065
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Entry
118813065 CDS
T09004
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118813065 (hnf1a)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118813065 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
118813065
NCBI-ProteinID:
XP_036434100
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MESSERAMDGGEERKSTGSVRRLSALQEQLVWSLLGSGLTREVLVQAMGELERERERAGA
DRSDRADGESSEEGEMDYPPPIFRELEKLPPQEAARQRAEVDHLLQEDPWHVAKMVKSYM
QQHNLPQREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQDEISKQFTNASRG
VLSGEEVGEEGRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRG
VSPSQLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPYSSQSAASAAQTLPPSPTQ
GLKFSQSAICESLGSVRSGSSDRAGGGHLVASPVQLEPSHTLLDPQHQKTVSVGGSLPPV
STLTSLHGVSGSGSPQGLIMASLPSVMSLGDSSLLIGLTSTQPQTVPVINNVGGGFTTLQ
PISFQQQLHASPQQPITQQLQGHIGPSPFMATMTQLPCHMYSKTDLASYPSSSLLSQAMV
IADSNSIGTLASLTTVRQSLSSDPEEHTDRQIQEESLHLQPSSPVPVSSGSLELYSQTQS
GDSHTSHLLASPPGDIDPYISSQMVSTAQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagcgaaagagcgatggacggaggagaggagcgaaagtcaacaggaagcgtc
cgcagactctcggccttacaggagcagctggtgtggtcacttttgggctcggggctgacc
agagaggtgctggtgcaggccatgggtgagctggaacgagagagagagcgagccggggct
gaccggagtgaccgtgcggatggagagagctcggaggagggcgagatggattatcctcca
ccaatcttcagggagctggagaagctaccgccacaggaagctgccagacagagagcagaa
gtggaccatctgctgcaggaggacccgtggcacgtggctaagatggtaaagagctacatg
cagcagcacaatctccctcagagagaggtggtggagtccacaggcctgaaccagtctcac
ctgtcccaacacctgaacaaaggtacgcccatgaagaaccagaaacgagctgctctctac
agctggtacgtcaagaaacaggacgagatcagcaaacagtttacgaacgcgagtcggggt
gtgttgtcaggagaggaggtgggggaggagggcaggaaggggcggaggaaccggtttaaa
tggggtccggcgtcccagcagatcctgttccaggcctacgagcgacagaagaaccccagc
aaggaggagagagaggggctggtggaggagtgcaaccgagcggagtgtctgcagaggggc
gtgtctccgtcccagctggccggtttgggctctaatctggtcactgaggttcgagtctat
aattggttcgctaaccgccgtaaagaagaagctttccgccacaaactggctctggacaca
ccgtacagcagccaatcagcagccagcgccgcacagacgctcccacccagccccacacag
ggtctgaagttctctcagtctgcgatatgtgagagtttggggtcagtgcggagtggcagt
tcagatcgggccggcgggggtcacctggtggcgagtccggtccagctggagccgagccac
accctgctggacccacagcaccagaaaacagtatcagtagggggctctctcccgcccgtt
agtacccttacctctctgcacggtgtgtccggttctggttctccgcagggcctcatcatg
gcctcgttacccagcgtcatgagtctgggagattcatcactgctgataggtctgacgtcc
actcagccgcagaccgtccccgtaatcaacaacgtagggggtggtttcaccacgcttcag
ccaatctccttccagcagcagcttcacgcctcgccgcagcagccaatcacgcagcagctg
cagggccacatcgggccgagccccttcatggccaccatgacgcagctgccctgccacatg
tacagtaagacagatctggcctcgtacccgtcctccagtctcctgtcccaggctatggtc
atcgctgatagcaacagcataggaaccctcgccagcctcaccaccgtccgacagagtctc
agttcagatcctgaagaacacacggacagacagatacaggaggagtctctacacctgcag
cccagctcacctgtaccagtgtcgtcgggcagtttggagctttactcccaaactcagtca
ggagattctcacacctctcacctgctcgcttcaccaccgggagacatcgacccctacatc
tcctcccagatggtctctaccgcacagtaa
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