Colossoma macropomum (tambaqui): 118813166
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Entry
118813166 CDS
T09004
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118813166 (apex2)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
118813166 (apex2)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
118813166 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
118813166
NCBI-ProteinID:
XP_036434247
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MKIVTWNINGIRTFKNGIKKALDSFDADIICVQETKVTRDLLDERTAIVDGYSSYFSFSR
GRSGYSGVATFCKDAATPFAAEEGLTGLLASNGDAVGCYGDQGAFSTEELQSLDSEGRAV
ITQHKFMGEEGSETLTVINVYCPRADPEKPERKLFKLQFYKLLQSRAETIEGPGSHVIIL
GDINTSHRPIDHCDPDDVDNFEDNPGRKWLDSFLFGSAENGNEEEVEDSETSPKCMAGGK
FVDTFRHFHPTRANAFTCWSTLTGARQTNYGTRIDYIFGSCSLVEKSFLSADIMPEVEGS
DHCPVWAQLSCTLIPSPKCPSLCTRYMPEFAGRQQKLSRFFVKVSEQQNVSSDIAESLPG
SQEAGEIRENVGPIAEGMSAGKKRTSDGPPESSAFKGKRSKQVKTANKPQGSLLAFFKPK
PSPEIPSSQSFMIRAKPANCSSLISEDSGPDIHKPKPNDVTDYNVTHDMLTDCLTEVRED
TEETRLNTEGPGCEDDIQIKATSHQETKDSKKGKCPDFWKAVLRGPPQPPLCKEHNEPCV
LRTVKKAGPNLGRQFFVCARPQGHASNPEARCNFFAWVEKGK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcacctggaatataaacggcataagaacttttaaaaatggcatcaagaag
gcgctcgactctttcgacgccgacataatctgcgttcaggaaacaaaagtcacccgcgac
ctgctggatgagaggaccgcgattgtagacggctacagctcctacttcagtttcagtcga
ggacgcagtggctactcgggagttgcaaccttttgtaaagacgctgctacaccttttgct
gctgaagaaggattgacgggtcttcttgccagcaatggagatgctgttggttgctatggt
gaccaaggtgcattctccaccgaggagttgcagtcactagacagtgaaggaagggctgtc
ataactcagcacaaatttatgggagaagaaggatcagagacattgactgtcattaatgtg
tattgcccacgtgcagatccagaaaagccagagaggaagctcttcaagctgcagttctac
aagctcctccagagcagagctgagaccattgaggggcctgggagtcatgtgatcattttg
ggggacatcaacacatctcaccggcccatagaccactgtgaccccgatgatgtggataac
tttgaggacaatccaggcagaaagtggctggacagctttctgtttgggtcagcagaaaat
ggaaatgaagaagaggtggaagattccgagacctctccgaaatgtatggccggtgggaag
tttgtggacaccttccgacatttccatccaacccgtgcaaacgccttcacatgctggtct
acgcttacaggcgccaggcagaccaattatggcacgcgcattgactacatctttggcagt
tgttcactggtggagaaaagcttcctgagtgcagatataatgcctgaggtggagggttct
gatcactgccccgtgtgggcacagctaagctgtaccctcatacccagtcccaagtgtccg
tctctgtgcacccgctacatgcccgagtttgccggaaggcagcagaaactttcacgcttt
tttgttaaagtttctgagcaacaaaacgtttccagcgacattgcagaaagtctacctgga
tctcaggaggctggggagattcgtgagaacgtcggtcctatagcagaggggatgagtgca
gggaagaaaagaacttcagatggacctccggagtcatctgcctttaaggggaaacgaagc
aaacaagttaaaactgcaaataaacctcagggtagccttttggccttctttaaacctaaa
ccgagccctgaaataccttccagccagagcttcatgataagggcaaaaccagctaactgc
agcagcctaataagtgaagactctgggcctgacatccacaaacctaaaccaaacgatgtt
acggactacaatgtaacccatgacatgcttaccgactgcctcacagaggtcagagaggac
actgaggagaccaggctaaatactgaaggaccaggttgtgaggatgatatccaaatcaaa
gccacaagccatcaagagacaaaggactctaagaaaggaaagtgtcctgacttttggaaa
gcagttttgcgtggaccaccccagccgccactgtgtaaggaacacaacgagccctgtgtg
ctgcgaactgtgaaaaaagcggggcctaatttgggccggcagttttttgtatgtgcccgc
cctcaaggtcatgcatccaatccagaggctagatgtaatttctttgcctgggtagaaaag
ggcaagtag
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