Colossoma macropomum (tambaqui): 118813217
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Entry
118813217 CDS
T09004
Name
(RefSeq) synaptobrevin homolog YKT6-like isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04130
SNARE interactions in vesicular transport
cmao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118813217
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118813217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118813217
Membrane trafficking [BR:
cmao04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
118813217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Ribosomal_L37
ApoA-II
Motif
Other DBs
NCBI-GeneID:
118813217
NCBI-ProteinID:
XP_036434320
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MKLLCLTVLYKGESKASLLKAAYELSSFGFFQRSSIQEFMTFTCGLIVERSALGAQASVS
EKEYMCHVHIRDDGLSAVAVADSEYPQRVCFSLLDKVLDEFSRQVDDRQWPTGTPETIRF
TMLEEYLNKYQNPREADALTRVQAEVDETKIILHRTMESLLDRGEKLDDLVQKSEELGQT
SKAFYKTARKQNRCCKMM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctatgtcttaccgtcctctacaaaggagagagcaaagccagcctactgaag
gcagcctatgaattatcttcattcgggttttttcaaagatccagcattcaggagttcatg
actttcacttgtggcctcatagtggaacgttctgcacttggcgctcaagcttcggtcagt
gagaaagagtacatgtgtcatgtgcacatacgggacgatggtctgagcgctgtggccgtc
gcagacagcgagtatccacagcgcgtgtgtttttcactgctcgacaaggtgttggatgag
ttctctagacaggtggatgaccgacagtggcctactggaactccagaaaccatccgcttc
accatgctagaggagtaccttaacaaataccagaatcctagagaagctgacgcactgacc
agagtccaggcagaagttgatgagacaaagatcattttgcacagaaccatggagtcatta
ttggacagaggagagaagctggatgatctggtgcagaagtcagaggaacttggacaaacg
tccaaagccttttacaaaactgctcggaagcaaaatcgctgctgcaagatgatgtga
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