Colossoma macropomum (tambaqui): 118813229
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Entry
118813229 CDS
T09004
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118813229 (smarcad1a)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118813229 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
bHLH_INO4
HHH_5
UBA_8
Motif
Other DBs
NCBI-GeneID:
118813229
NCBI-ProteinID:
XP_036434336
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MSLFNLDRFRFQKEKAGESVSSPVQFPRQEQRRVLSKSSSDKENYLAAHQVKPDGRRAPG
KVPRHALEDVSSDDEVVKKVKEPAIQQSAKKARECEEHIDLNLEEKVAKLLEMFPQKSRS
EILEVIESTSTLEGAVACCLLVYGEKDSSKVKGTTEDSDNQCEMQPKKRRKTVESDSDPE
SEEESQELSREQQEALVRKLKKKLPEFENEVLRDVLREHDWDLENALGSLLMFSSESEDS
SPKRAQDSKSKVSDNLKPARSSQESNGERKQKPHSGLSRWLSAVSSKSTQKTQNASTRST
STETKTVSHNFKREKADKVEQEQSSDSDDEEELESEAGSVSDDFDSDSEDDSIDDRIKHQ
IVQFLQEASLDELTLISGCSLKKAQKIILLRPFNTWEDVNEQFCKDNSLSMELVHGCKMV
LKERQVLKQLMSRCESISRKMTKDVTQVIKNGMGSMKQPAILNSKFKLQPYQLIGLKWLI
LLHQHKLSGILADEMGLGKTIQAISFLAYLYQKGIKGPHLITVPSSTVDNWVRELRLWCP
SLTVIVYYGSVEDRKYLRHDILSNQVEFNVIVSTYNLTIGNENDRSLFRKLKLKYAVFDE
GHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLLELISLLNFIMPSMFSSSTSQISKM
FSTKSSEEESTFHKERIAQAKLIMKPFILRRVKSEVLKQLPPKVEKIEMCPMSDAQQQLY
DKLFSRLKKTVSGEKRELSNVMMQLRKMANHPLLHRQYYTTEKLAAMSRAMLKEPTHFDA
DPALIQEDMEVMSDFELHNLCKEYTSISRFQLEKKLLLDSGKFALLTKLLAKLKEKGDRV
VLFSQFTMMLDIVEILLKHLGHEYVRLDGSTPMAERIGLIDKYNTDPEIFVFLLSTRAGG
QGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQVIKLVSKDSIEACMLRVGQE
KLKLEQDMTTDEGDEGTMSEDMAELLKVSLGL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcaatctcgatagattccgtttccagaaagaaaaggccggtgaaagtgtc
tcctcgccggtccagtttcccagacaagagcagcgcagagtgttgagtaagtccagttcg
gataaagagaattacctggcagcacaccaggtgaaaccagatggcagacgtgcaccagga
aaagtccctaggcatgcgctggaagatgtgtcttctgatgatgaagtggttaaaaaagtc
aaggagcctgctatacaacaatcagcaaagaaggcaagagagtgtgaagagcacatagat
ttgaatttggaggagaaagtggccaaactcctagaaatgttcccccagaagagccgaagt
gaaatactggaggtgattgagagcacaagcacactggagggagctgtagcgtgttgtttg
ttggtttatggagagaaagattcatccaaagtgaaagggacaacagaagacagtgataat
caatgtgagatgcagccaaagaagcggagaaaaactgtggaatctgactctgatcctgag
tctgaggaagagagtcaggagctgagcagagagcaacaggaagctctggtgcgcaaactg
aaaaagaaactacctgagttcgaaaatgaggtgctgagggatgtcctgagagaacatgac
tgggatcttgagaatgccttgggatctctactgatgttttcatctgaatcagaagactcc
agtcctaaaagagctcaagacagcaaatccaaagtgtcagataatttgaagcctgcaagg
agcagccaagagagcaacggagagaggaagcaaaagccacattctggtctctcaagatgg
ctgtcggctgtatcaagcaaatccactcaaaaaacacaaaatgcctctactaggtcaaca
tccacagaaacaaaaacagtcagtcataattttaagagagaaaaagcagataaggtagag
caagagcaaagcagcgattcagatgatgaagaagagcttgagagcgaagctgggagtgtt
tctgatgactttgattcggacagcgaagacgatagcattgatgatcgtatcaagcaccag
atagtacagtttctccaggaggcttctttagatgaactgactttgatatctggttgttca
ttgaagaaagcccagaagataatcttactgaggccatttaacacatgggaagatgtgaat
gagcagttctgtaaggataacagcttgtctatggagctggtgcacggctgtaaaatggtg
ctgaaagaaaggcaggtgctgaagcagctcatgagcaggtgtgaaagcatttccaggaag
atgaccaaagatgtcacccaggtcatcaagaatggcatgggctctatgaagcaaccagcc
atcctcaacagcaaattcaaattacagccgtaccaattgataggcttgaaatggcttatt
cttcttcaccagcacaagctcagtggaatcctggctgatgaaatgggattgggaaagaca
attcaggcaatttctttcctagcttatctctatcaaaaggggattaagggccctcatctt
attaccgtaccttcttccacagtagataactgggtaagagagctaaggctgtggtgccca
agtctgacggtaattgtttactatggctctgtggaggaccgtaaatacctccggcatgac
attctcagcaatcaagtggaattcaatgtcatagtgtctacgtataacctcaccataggg
aatgaaaatgaccgcagtctcttccgcaagttgaaactgaaatatgctgtgtttgatgag
ggccacatgctgaagaacatgaactctctgcgctaccgccatctcatggccattaatgct
gaacaccgattgcttctgactggaactcctctacagaacaacttgctagaactaatatct
ctgctcaacttcatcatgccttccatgttctccagcagcacctcccaaatctccaagatg
ttctccacgaaatcatcagaagaggagagtactttccataaggagagaattgctcaagcc
aagctcattatgaagcccttcatactgagacgagtcaagagtgaggtgctgaagcaacta
ccacccaaagtggagaagatagaaatgtgtcccatgagtgatgctcagcagcagctctat
gataaactcttcagtaggctcaagaagactgtcagtggggagaaacgtgagctcagtaac
gttatgatgcagctgaggaaaatggccaaccacccactcctgcatcggcagtactacacc
actgagaaacttgctgccatgagtcgagccatgctgaaggaaccaacacattttgatgca
gatcccgcattgatccaggaagacatggaggtcatgtcagattttgagctgcataacctg
tgtaaagaatacacctccatcagtaggttccaactggaaaagaagctcctcctagactct
ggaaagttcgctttgctcaccaaactattggccaagctcaaagaaaagggtgacagggtg
gtgctcttcagccagtttactatgatgctggatattgtggagattctgctgaaacacctt
ggccatgagtatgttcgattggatggctcaacacctatggcagaaagaattggccttata
gacaaatacaacacagaccctgagatatttgtctttcttctttcgactcgtgctggtggc
caaggaataaaccttgcctctgctaacacagtgatccttcatgatattgattgcaatcct
ttcaatgacaagcaagcagaagaccgttgtcatcgaatggggcagaccaggactgtacag
gttatcaaactggttagcaaagactccatagaggcctgcatgcttcgtgtaggacaggaa
aagctcaaacttgaacaagacatgactactgatgaaggtgatgagggcaccatgtctgag
gatatggcagagctgctaaaggtatcgctgggtctttga
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