Colossoma macropomum (tambaqui): 118813515
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Entry
118813515 CDS
T09004
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04142
Lysosome
cmao04144
Endocytosis
cmao05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118813515 (cltcl1)
04142 Lysosome
118813515 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118813515 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118813515 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118813515 (cltcl1)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118813515 (cltcl1)
Exosome [BR:
cmao04147
]
Exosomal proteins
Proteins found in most exosomes
118813515 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_Vps8
LVIVD
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
118813515
NCBI-ProteinID:
XP_036434781
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQTLGVNPANIGFSCLTMESDRFICIREKVGEQNQVVIIDLSDPSN
PIRRPITADSAIMNPASKVIALKAARTLQIFNMEMKSKVKAHTMTDEVMFWKWISINTIA
LVTDTAVYHWSMEGDSQPIKMFDRHASLAGCQIINYRTDEPQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFVQYKLEGNPNPSTLFCFAVRSQAGGKLHIIEVGQPAPGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
ETIFVTAAHESTSGIIGVNKKGQVLSVCVEEENIVNYTTNVLQNPELGLRMAVRSDLPGA
EELFTRKFNTLFTQGNYAEAAKVAASAPKGVLRTAETIRKFQSAPAQGGQASPLLQYFGV
LLDRGQLNRMESVELCRPVLQQGRMQLLEKWLKGEKLECSEELGDLVKAADPTLALSVYL
RANVPAKVIQCFAETGQYQKIVLYAKKMGYSPDWIMLLRSVMRSGPDQGLQFAQMLVQDE
EPLANINQVVDVFMEGNLVQQCTSFLLDVLKNNKPEEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAIVHTHLLNPEWLVNFFGSLSV
GDSMECLRAMLAANLRQNLQLTVQVASKYHEQLGTATLVELFESFKSYEGLFYFLGSIVN
FSQEPEVHFKYIQAACKTGQIKEVERICRESSCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPIVVGGLLDVDCSEDVIKSLIIAVRGEF
STDLLVEEVEKRNRLKLLSSWLEARTQEGSEEPATHNALAKIYIDSNNSPERFLRENAYY
DSATVGRYCEKRDPHLAFVAYERGQCDMELIKVCNENSLFKSEARYLVRRKDPDLWAVVL
EENNPYRRALIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLENSIFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFSIFKKFDVNAS
AIQVLIEHIGNLDRAYEFAERCGEGPVWSQLARAQLQKNLVKEAIDSYIRADEPSAYMEV
VDAASRNNNWEDLVKFLQMARKKARESYVETELLFALAKTNRLSELEEFVNGPNNAHIQQ
VGDRCYEEGMFEAARLLFNNVSNFARLASTLVYLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEELISYYQERGYFEELIMLLEAALGLERAHMGMFTEL
AILYSKYKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMIA
HPTDAWRDASFKEIISKVANVELYYKSLQFYLEYKPMLLNDLLTVLAPRLDHTRAVNFFT
KVNQLRLVKPYLRSVQSHNNRAVNEALNSLLTEEEDFQGLRASIDAYDNFDSISLAQKLE
QHELIEFRRIAAYLYKINQRWAQSIQLCKKDNLYKDAMQYAAESKESEHAEALLRWFLEE
GRRECFAACLFSSYDLLAPDVVLELAWRHGLIDFAMPYFTQVMREYLTKVDELAGQVKVD
KLEEAESKRSTEEGSEPTSIVYGQQLMLTTGQTPVAPQAGYPGYGYTAPGYAPPAYGFNL
QP
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatattgcccatccgttttcaggaacatctgcagctgcagactctgggggtg
aacccagccaatattggcttcagctgtttgactatggagtcggaccgattcatctgcata
cgggagaaagtgggcgagcagaaccaggtggtgatcatcgacctcagtgacccctcaaac
cccatccgccggccaatcacggcagacagtgccatcatgaaccctgccagcaaggtcatc
gctcttaaagctgcaaggacactgcaaatctttaacatggagatgaagagcaaggtgaag
gcccacaccatgactgatgaagtcatgttctggaagtggatctccatcaacactatcgcc
ctggttactgacacagctgtctaccattggagcatggagggagactctcagccaatcaag
atgtttgaccggcatgctagtcttgcaggctgccagatcatcaactatagaacagatgaa
ccccagaaatggcttctgcttataggcatatcagcacagcaaaaccgtgtggtcggcgcc
atgcagttatactctgtagacagaaaggtgtctcagcccatagagggccatgcagcagcg
tttgtacaatacaaattggagggaaatccaaacccctccacacttttctgcttcgctgtc
aggagtcaggctgggggaaagctacacataattgaggtgggtcagcctgcaccgggcaac
cagccatttgccaagaaagctgtagatgtgttcttccccccagaggcccagactgacttc
cctgtggccatgcagattggtgcaaagcatggtgtgatctacctcatcactaagtatggc
tacattcacatgtatgatctggagtcaggcgtgtgtatttatatgaaccgcatcagcgca
gaaacaatctttgtcacagctgctcatgaaagtacctctggaatcataggagtaaataag
aagggacaggtcctttctgtgtgtgttgaagaagagaacatagtgaactataccactaat
gtgctgcagaatccagaactgggcctacggatggcagtacgcagtgatctacctggagca
gaggaactcttcacacgcaagttcaacacacttttcacacagggcaactacgcagaggct
gcaaaagttgctgcttcggcacctaagggcgttttgcgaacggcagagactattcgtaag
ttccagtctgcgccagctcaggggggccaagcctctccgttgctgcagtattttggtgtg
ctgttggaccgaggtcagcttaatagaatggagtctgtggaactgtgcaggccagtgctg
cagcagggacgcatgcagctcctggagaaatggctgaagggagagaagttggagtgctct
gaggagttgggggacctggtgaaagctgcggatcccacactggcacttagtgtctacctc
cgagccaacgttccagcaaaggtcatccaatgctttgcagagaccggacaataccagaaa
atagtgctgtatgctaaaaagatggggtactctcctgattggataatgttgttgaggagt
gtgatgcgctctggaccagatcaggggcttcagtttgcacagatgcttgttcaagatgag
gagcctcttgccaacattaaccaggtggtggatgtctttatggagggtaatttggtgcag
cagtgcacttcttttctattggatgttctaaagaacaacaaaccagaggaagggcatctg
cagacacgcctcctggagatgaatctcattcatgccccccaggtagcagatgctattttg
ggtaatcagatgttcacccactatgaccgtgctcacattgctcagttgtgtgagaaggca
ggcttactgcagagagctttggagcacttcactgacctctatgacatcaaacgagccatc
gtacacacgcacctgctcaaccctgagtggttggtgaacttctttggctctttatcagtc
ggggactcgatggagtgtttaagggccatgttagcagctaacctcagacagaacctgcag
ctgaccgtccaggtggcttccaaataccatgaacagctgggcactgctacactggtggag
ctgtttgagtcattcaagagctatgagggtctgttctacttcctgggctccattgtgaac
ttcagtcaggagcctgaagtgcactttaagtatatccaggcagcatgcaagactggacag
attaaagaggtggagcgaatctgcagagagagtagctgctacgatcctgagcgtgtcaaa
aactttcttaaggaggccaagttgacagatcagttgcctttgatcatagtatgtgaccgc
tttgattttgtccatgaccttgtgctatacctgtatcgtaacaacctgcagaaatacata
gagatttatgtccaaaaggtgaaccccagtcgattgcccatagttgtaggaggtctgttg
gatgttgactgttcagaagatgtgatcaagagcctgatcatagcagtgcggggagaattt
agcactgaccttcttgtggaggaggtggagaagagaaacaggctaaagctgttgtcttct
tggctggaggctcgcacacaggagggcagtgaggagcccgctacccataatgctctggct
aaaatatacattgacagtaacaacagcccagagcgcttcctgcgggaaaacgcttactat
gacagtgccaccgtgggccgctactgcgagaagagagacccgcacttggcctttgtggcc
tatgagagggggcaatgtgacatggagctcatcaaggtgtgcaatgagaactccttgttt
aaaagcgaagcacgttatctggtccggcggaaagatccagatctgtgggctgtggtgctg
gaggagaataatccctacagacgagcgcttattgaccaggtggtccaaactgcactgtct
gaaacacaggaccctgaggaagtgtctgtaacagttaaagctttcatgactgcagacctg
cccaatgagctcattgaacttctggagaaaatagtgctggaaaactccatattcagtgag
cacagaaacctgcagaacctgttgattctaacagccattaaagcagaccgcacacgagtg
atggagtatatcaaccgcctagacaactatgatgctccagacattgctaacattgctatt
agcaatgaactctatgaggaggctttctcaatctttaagaagtttgatgtcaacgcctcc
gctatccaggttttgattgagcacattggcaatctggaccgggcatatgagtttgcggaa
cgctgtggggaggggccggtgtggagtcagctggccagagctcagctccagaagaacctg
gttaaggaggccatcgactcgtacatcagagcagacgagccctcagcttacatggaagtg
gtggatgctgccagcagaaacaataattgggaggatctggtaaagtttctgcagatggca
cggaagaaggccagagagtcgtatgtggaaacagaactcctctttgctctagctaaaacc
aatcgcctctctgagttagaggaatttgtcaatggccctaacaatgctcatatacaacag
gttggtgaccgctgttatgaggagggcatgttcgaagcagcaagactgctcttcaataat
gtgtctaattttgcacgtctggcatccacacttgtctaccttggagagtatcaggcagca
gtggacagtgctcgcaaagccaactccacacgcacatggaaagaggtgtgttttgcatgt
gtagatggagaagagttcaggttggctcagatttgtggcctgcacatcgtaattcatgcc
gatgagctagaagaacttatcagttactatcaggaacggggttattttgaggagttgatc
atgctgctggaggccgcgttaggtctggagcgtgctcatatgggcatgttcactgagctg
gccattctctactccaaatacaaaccacagaagatgagagaacaccttgagctcttctgg
tccagagtcaacatccctaaggtactacgtgcagccgaacaggcccacctatgggcagag
cttgtgttcctgtatgataaatatgaagagtatgacaacgccataatcaccatgattgca
caccccaccgacgcatggagagatgcttcctttaaagagattatcagcaaggtggcgaat
gtggagttatattacaagtcattgcagttctatttagagtacaaaccaatgctgctcaat
gacctgctgactgtgctagcacctagactggaccacacaagagcagttaacttctttact
aaggtaaatcagttgaggttggtgaagccatatctgagatcagttcaaagccacaacaac
agagctgtgaatgaggccttaaacagcctcctgacagaagaggaagacttccagggtctg
cgtgcctccatagatgcctatgacaactttgactccatcagtctcgctcagaaactggag
cagcatgaactgattgagtttagacgcattgctgcttatctctacaaaattaaccagcgc
tgggcacaaagcatccaactttgcaagaaagacaatctgtataaggacgcaatgcagtac
gctgcagagtcaaaggaaagtgagcatgctgaggctctccttcgctggtttctggaggag
ggccggagggagtgctttgctgcctgtctcttctcctcctatgacctgctggctcctgat
gtggtgctggagctggcctggagacatggcctcattgactttgccatgccttacttcaca
caggttatgagagaataccttaccaaggtggatgagttagctggacaggtgaaggtggat
aaactagaagaggctgagagtaaaagaagtactgaagaagggagtgaacccacctcaata
gtgtatggtcagcagctgatgttgaccactggtcagaccccagtagcaccccaggctgga
taccccggttacggctacactgctcctggatatgccccgccggcctacgggttcaacctt
cagccttaa
DBGET
integrated database retrieval system
