Colossoma macropomum (tambaqui): 118813553
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Entry
118813553 CDS
T09004
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118813553 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118813553 (mbd4)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118813553 (mbd4)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
118813553 (mbd4)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118813553 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
118813553
NCBI-ProteinID:
XP_036434836
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MVIDESADPKLPSSGQTAPVKTDRMATEGLPPGWTRETRQRKQGKTAGKIDTYIISPQGR
RFRSRSELQNYLLSEECAHLKLDTFDFTTPKSSSGAPQQERKAERRRRTKKQGAKPAENL
GPEPALAVTENRGMEMDRAEHEEEKNETERQKDSCHGEETESKEQKEVGEHQEGAESERE
EASGRVTPAENQQISVPVLTVQSASDSEQENEAEEEKEETDEVKEGKQESNEATGGSCSP
VRSTQSGTKLLLEKRKTSPYFSSKSGGLSPPKRKALRKWTPPRSPFKLVQETLFHDPWKL
LVATIFLNKTSGKLAIPTLWQFFERYPSAEVTRASDWKPLAELLQPLGLNALRAKALIRF
SDEYLTKSWRYPIELHGIGKYGNDSYRIFCIGEWREVTPNDHKLNDYHTWLWENHEQLGL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggttattgatgagtccgctgaccccaaactgccatccagtggtcagacagcacctgtg
aaaacagacaggatggccacagaggggctccctcccggctggactagagagacgagacag
aggaaacagggaaagacagcaggcaagatagacacctacatcatcagtccgcagggcaga
cgcttcaggtccaggtcagagctccagaactacctgctctcggaggaatgcgctcatctg
aagctggacacttttgactttaccacacccaaaagcagcagcggagcacctcaacaagag
aggaaagcagagagacggagaagaacaaaaaaacagggagcaaaacctgcagaaaacctc
ggtccagagccggctttggcagtgacggaaaaccgaggcatggagatggacagagcagaa
catgaggaagagaagaacgagacagaaaggcaaaaagacagttgtcatggggaggaaaca
gagagcaaagagcaaaaagaggtaggagaacatcaagaaggtgcagagagtgaaagagag
gaagcttcaggcagagtgactcctgcagaaaaccagcagatttcagtgccagtcttaaca
gtgcagtctgcatcagacagtgaacaagagaatgaagcagaggaggagaaagaggaaacg
gatgaggtaaaggaaggaaaacaggagagtaatgaggccacaggagggagctgctcacct
gtgagaagcacacaaagtgggacaaagttactgttggaaaagcggaaaaccagtccatac
ttcagcagcaagagtggtggtctcagtcctccgaagcgaaaagctttaagaaagtggact
ccacctcgttcccccttcaagctggtgcaggaaaccctgtttcatgacccatggaagctt
ctagtggccaccatattcctcaataagaccagcgggaagttggcaataccaacgctgtgg
cagttcttcgagcgttatccgtctgctgaggtaacccgagccagtgactggaagcctctg
gctgagcttctgcagcctcttggcctcaacgccctccgagccaaagcgctcatccgcttc
tccgatgagtacctcactaaatcatggagatatcctatcgagttgcacggaataggcaaa
tatggcaatgactcctaccgcatattctgtattggagaatggagagaggtcactccaaat
gaccacaagctgaatgattatcacacttggctgtgggagaatcatgagcagttagggctc
tga
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