Colossoma macropomum (tambaqui): 118813653
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Entry
118813653 CDS
T09004
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118813653 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118813653 (xpc)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118813653 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
118813653
NCBI-ProteinID:
XP_036434993
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MAKHKKIAGVATEKDTTKKLKQVAKKSKAPKAPKAPKTPKTKGNSTGAKNVTKSSKPRGR
ASKKADEPSDGLTSKYFQVTEPVKEEPEDMSDPREDVGVTFPECTTPNDKMKEEKEVEKG
EEDGESEESDEDEWEEVEELAGPLGPVDTELEPAVPSQPVEIEIETAEAMHKRQRKEKRK
AEFETYLRRMMKRFNKELLEDTHKVHLLCLLAGGLFRNHLCCEPDLLAIALSLLPAHFTS
VVTERINTGFLEGLLKWFRATFTLNPELPEEKGVELRGVLERRLGSLSARDHEEMTYLFL
LMLRSLQLFCRLVLSLQPVPFKQPTKKNKTQSSTSPAAKDSSDEPDEKPEKPKVSPGSKR
SFGANTGTKRQKGGKRQKKNESEEEDKEKEAAGGQRPKNTKRRSVASKVSYKEESSEEEE
ASGGEEFQLTSEEESDDSEDGGKRSKRSSKTKGKDKGKARRRSSGVKKGAKKEEEEDDDF
EEEEHEETKRRGRRRQGKGDDEWIEVYLEGAKRWVCVDVNQGVGKPQLCTKQATQPITYV
VGVDSEGYLKDLSTRYDPTWLTSSRRRRIDSEWWEETLDFYECPDSEREQQEDKELRDKL
LDKPLPTSISEYKNHPLYALERHLLKYEALYPRTAAILGYCRGEAVYSRDCVHTLHSRDT
WLKEARTVRLGEEPYKMVKGFSNRSRKARMMSEQKDYKDLALFGHWQTEEYQPPLAIDGR
VPRNEFGNVYMFKPCMLPVGCVHLRLPNLHRVARKLNLDCAAAVTGFDYHGGYAHAVTDG
YIVCEEHQEILKAGWENEQEIQQKKEQEKREKRALSNWTLLVKGLLIKERLQRRYGRQGL
EKGTGLGQGDEVGAGLSSGEEDEGGAHTAPPTLAASWPQNRQEEQEEGGAKKSISKRERR
GQDKHLFPFEKSK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacataaaaagatagcaggtgttgccactgaaaaggacacaacaaagaaactg
aagcaggttgcgaagaagagcaaagctccaaaagctcccaaagctcccaaaacgccgaag
accaaaggaaacagcactggagccaaaaatgtcaccaagagctcaaagcccagaggccga
gcatcaaaaaaggcagacgagccctcggacgggctgacgagtaaatacttccaggtcaca
gagccagtgaaggaagagcctgaggacatgagtgatccccgtgaggacgtgggtgtgaca
tttccagagtgcaccacaccaaacgacaagatgaaagaagagaaagaagtggagaaagga
gaagaggatggcgagagtgaggagagtgatgaagatgagtgggaggaagtggaagaactg
gccggccccttgggacctgtggatactgagctagagcctgcagtcccatctcagccagta
gagattgagatcgagacagctgaggccatgcacaagagacagaggaaggagaagcggaaa
gctgaatttgagacttacctgcgccgaatgatgaagcgctttaacaaggagctgctggaa
gatacacacaaggttcacctgctgtgtttattggccggtgggctgttccggaaccacctc
tgctgtgagcctgacctgttggccattgcactgtccttactgcccgctcacttcaccagt
gttgttacagaacgtatcaacacaggtttccttgagggccttttgaagtggtttagagca
acgtttacgctaaaccctgagcttcctgaagaaaagggtgtggaactgcggggggtgctg
gagagacgtttggggagtctgtcagcacgtgatcatgaagagatgacctatctgttcctg
ctgatgctacggtcgctgcaactattctgtcgattggtgctctcattacagcctgtacca
ttcaaacaaccaactaaaaagaataaaactcaaagctccaccagtcctgctgctaaagac
agttctgatgaacctgatgaaaagccagaaaaacccaaagtgtctcctgggtccaaacga
tcattcggtgccaacactgggactaagaggcagaagggaggaaagagacagaaaaagaat
gagagtgaagaagaagacaaagaaaaagaagcagctgggggacaacggccaaaaaacacc
aaaaggaggagtgttgcatcgaaagtgtcatacaaagaagagagcagtgaggaggaggaa
gctagtggtggagaggagtttcagctgaccagtgaggaagagagtgatgactcagaagat
ggaggtaagaggtcaaaaaggagttcaaagactaaaggaaaggacaaaggcaaggcgcgg
cgacggtcaagcggggtcaaaaagggtgcaaagaaagaagaggaggaggatgatgacttc
gaagaagaagaacatgaggaaacaaagcgtcgagggaggcgcaggcagggaaaaggagat
gacgagtggatagaggtgtaccttgagggggcgaagaggtgggtgtgtgttgatgttaat
caaggagtgggcaaaccgcagctctgcaccaagcaggccactcagcccattacatacgtc
gtgggagtggacagtgagggctacctaaaagacctgagcactaggtatgaccccacctgg
cttacgtcatcacggcgacgacgcatcgactcggagtggtgggaggagactttagatttc
tacgagtgtccagattctgaacgagagcaacaagaggacaaagagctacgagataagttg
ttggataagccactgccaacctccatatccgagtacaaaaaccaccctctgtatgcgctg
gagagacacctgctgaaatacgaggccctgtacccccgcactgcggccatcctgggctac
tgccggggagaagctgtctactcacgggattgtgtccacacgctgcattccagggacacc
tggctaaaggaagcacgcactgtccggctgggggaggagccttacaagatggtaaagggc
ttttcaaaccgctcacgcaaagccaggatgatgtctgagcagaaggattacaaggacctg
gccctgtttggccactggcagactgaggagtaccagcctcctctagccatcgatggcagg
gttccacgtaacgagtttggaaacgtatacatgtttaaaccatgtatgttaccagtggga
tgtgtgcacctgcgtctgcccaacctgcacagagtggctcgcaaactcaacctggactgt
gctgctgcggtaacgggctttgattaccatggaggatacgctcacgctgtcactgacggc
tacattgtgtgcgaggaacatcaagaaattctgaaagctggctgggagaatgagcaagag
atacagcagaaaaaggaacaagagaagcgtgagaagcgagccttgtcgaactggacactg
ctagtgaaaggccttctaatcaaagagaggctacagcgtcgttatgggcgacagggcctg
gaaaagggcactgggttggggcagggcgacgaagttggggccggattatcatccggagag
gaggatgaaggcggagctcacactgccccacccacactggctgcatcatggccgcaaaac
agacaggaggagcaggaagagggaggagctaagaagtctatcagtaaaagagagaggcgt
ggccaagataaacatctcttcccttttgaaaaaagcaagtga
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