KEGG   Colossoma macropomum (tambaqui): 118813856
Entry
118813856         CDS       T09004                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03420  Nucleotide excision repair
cmao04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118813856 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118813856 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118813856 (ercc8)
   03400 DNA repair and recombination proteins [BR:cmao03400]
    118813856 (ercc8)
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     118813856 (ercc8)
DNA repair and recombination proteins [BR:cmao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118813856 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th WD_LRWD1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd Nucleoporin_N
Other DBs
NCBI-GeneID: 118813856
NCBI-ProteinID: XP_036435326
LinkDB
Position
Unknown
AA seq 400 aa
MLSFLTARQTGVDDPVRLRRAESTRRVLSLELNHDRDVERIHGNGINTIDIEVIEGRYML
SGGSDGVIVIYDLENNSKKPHYTCKAVCTVGRSSRYVHKFSVETVQWYPHDTGMFVSSSF
DKTMKVWDTETLKPAEAFQFEGNVYCHHMSPIARKHSLIAVGTKDPKVQLCDLKSGSRIH
ILQGHRGEVLSVRWSPRYEHILATASTDSRVRVWDVRRASGSLFTLDQHNGDKSKASSES
VNTAHDGRVNGLCFTDDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVVNESRKGVKFTV
SRGCSPEFVFVPCGSSVAMYGLHTGELVTMLRGHYNNVDCCEFHTDYQELYSGGKDCNIL
AWVPVLRQPDNEDEGAGSVKGGAQNAVNPAFEDAWSSDED
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctgagttttcttacagcccgacaaacgggtgtagacgacccagttcgcctgagacga
gcagagtcgacaagaagggtgctgagtttggagttaaatcacgacagagatgtggaacgt
attcatgggaatggaatcaacactattgacattgaggtcattgaagggagatatatgttg
tcaggaggctcagatggagtaattgtgatctatgacctggaaaacaacagcaagaagcca
cattacacatgcaaagcagtttgcactgtgggcaggtcaagtcgttatgtgcacaagttc
agtgtggagacagtccagtggtaccctcatgacactggcatgtttgtgtccagctcattt
gacaaaaccatgaaagtttgggacacagaaactttgaagccagctgaagcgttccagttt
gaagggaatgtctactgccaccatatgtcacctattgccaggaaacacagtctaatagca
gttggtaccaaagaccctaaagtccagctgtgtgatctgaagtctggttcccgtattcac
atccttcagggtcacagaggggaagttctttctgtcaggtggtctccacgctatgagcac
atcctggccactgctagtactgacagcagggtgcgtgtatgggatgtgcgacgggcctct
ggaagcctctttacattagaccagcacaacggggacaagtctaaggcctcttctgaatca
gtgaacacagcccatgatggacgcgtcaatggcctgtgcttcaccgatgacggcctttat
ctcctcaccacaggcacagacgaccgcatgcggctgtggaacagcgccactggcgagaac
acactggttaactatgggaaggtggttaacgagagccgtaaaggtgtgaagttcaccgtg
tcgagaggctgcagcccagagtttgtctttgtgccatgtggcagctctgtggccatgtac
ggccttcacaccggtgaactggtcactatgctgaggggacattacaataatgtagactgc
tgtgagttccacacagactatcaggagctctacagtggtggaaaggactgtaacatcttg
gcatgggtgcctgtgctacgtcaacctgacaatgaggatgagggggctggctctgtaaag
ggtggggcccaaaatgcggttaatcctgctttcgaagacgcctggagcagcgatgaagat
taa

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