Colossoma macropomum (tambaqui): 118813883
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Entry
118813883 CDS
T09004
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03083
Polycomb repressive complex
cmao04980
Cobalamin transport and metabolism
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118813883 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118813883 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118813883 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmao01009
]
118813883 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118813883 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
cmao03029
]
118813883 (hcfc1b)
Protein phosphatases and associated proteins [BR:
cmao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118813883 (hcfc1b)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118813883 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
118813883 (hcfc1b)
MLL-HCF complex
118813883 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118813883 (hcfc1b)
Mitochondrial biogenesis [BR:
cmao03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118813883 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
118813883
NCBI-ProteinID:
XP_036435370
LinkDB
All DBs
Position
Unknown
AA seq
1930 aa
AA seq
DB search
MASPGTGTATSGASGTVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVD
ELHVYNTATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASR
WEWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLE
LRPGSNVTGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDI
DTLTWNKPGISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLA
CLNLDTMTWESILMDTLEDNIPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLW
YLETDRPHAPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPNVTPTS
SLPANSPKSPAPAAAAPASQSMPLTGVTLVQQTPSPTTSMPGSPLAAASPRGPAILKVAA
PQSTAGTSIVTVRQANQVGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAA
AAAATQKIPPSSAATVLNVPAGATIVKTVAVTPGSTTLPATVKVASPVMVSNPATRMLKT
AAAQVGTSTISTPNTPTRPVITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLTVGS
GGTLISSLGKVMSVVQTKPVQTSAVTGQAGSSPVTQIIQTKGPLPAGTILKLVTSADGKP
TTIITTTQAGGTGTKPTILGISGVSPSTATKPGTTIIKTIPMSAIQQGAAGAAGSPGLKS
PITIITTKMVTPGTGTPGKIITAVPKLTTGTGQQGVTQVVLKGAPGQPGTILRTVPMGGV
RLVSPGAVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGNVVTSNASLATPITTLG
NIATLSSQVISPTAITVSAAQTSLTTASSVALQAAAQPTQVTLISTPSGVEAQPVQDLPV
SILASPTSEQPSSTGAEASETTGEVTLVCSNPPCETHETGTTNTPTVAAAKICSNPPCET
HVTGTTNTTTTASANMGRVQQVCSNPPSETHDTGTTNTATTASCSMGSLEMGVVNSSTAS
QQSTMTSPGSTLLSPVCSNPPCETHETGTTNTPTQASSSMGSGQTNTVQRVCSNPPRETH
ETGTTNTPTQASSSMGSGQTNTVQRVCSNPPRETHETGTTNTPTQASSSMGSGQTNTVQR
VCSNPPRETHETGTTNTPTQASSSMGSGQTNSVQRVCSNPPRETHETGTTNTPTQASSSM
GSGQTNTVQRVCSNPPCETHETGTTNTPTQASSSIGAVQNGAVQRVCSNPPCETHETGTT
NTATTATSSLESAEDTAQQSAEGQEDSGTSVEATSSTEPANPTIQSRAVTMVTQATPTPG
PSVPEISSMAGSAAIVEASGEGEAEAMEQGDSEAVATGEEPMQTEGELGEEGTVRVVAIE
QGASGEAGTMLQVHVAMEAQPGQGEQAEMEQGGEGEEAVGLAGQNSEALALPQELMSAEG
QPTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDAGQDGQ
QSTTIPIVLTQQELAALVEQQQQLQEAQAAAAAAQQLAADSGSTALPTEGLAPADSLNDP
TSESNGHEMTAAAVVTGAVARLLPSTTAETLAPSSTFAPSQPMAVASPAKMQAATALTEV
ANGIESAAGKQGPPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYMPADDSEVTDDDSGT
IPDYSQMKKVELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPD
GAHLTWEPPSVTSGKIIEYSVYLAIQSSQTTEAKASAPAQLAFMRVYCGPNPSCLVQTSS
LSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAVKRPVSSPDVKG
IGVKKARADQ
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctggtactggtactgcgacgtctggcgcttcgggcacggtgctgcagccc
cggtggaagagggtgctgggctggtccggcccggttcctcgccctcggcacggacatcgg
gctgttgctatcaaggagctcatggtggttttcggcggcggcaatgaaggaatcgtcgat
gagctccacgtatacaacacagctaccaatcagtggtttattccggctgtccggggtgat
gttccacctggctgtgctgcttatgggtttgtgtgcgatggcacacggctgctggtgttc
gggggcatggtggaatatggaaagtacagcaatgatttatatgaactacaggccagtaga
tgggagtggaaacggctgaagcctaaagctccaaagaatggcccgccgccctgtccccgc
ctgggccacagcttctccctggtgggaaacaaatgctacctgtttggaggcctcgccaat
gacagcgaggatcccaaaaacaatattccaagatacctaaatgacctatacacactcgag
ctgcgtcctggctctaatgtaacaggctgggacatccccatcacgtacggcgtgctgccc
cctcctcgcgagagccacactgccgtggtttacacagagaaaacctctaagaagtcccgg
cttgtcatctacggaggcatgagtggctgccggctcggagacctctggacgttagacata
gacactctgacctggaacaagcctggcatcagcggcacagctcctctccctcgcagcctt
cactcagcaacaactataacaaacaagatgtatgtgtttggcgggtgggtgcccttggtg
atggatgatgtgaaagtggctacacacgagaaggaatggaagtgcacaaacacactggct
tgcctaaaccttgacacaatgacatgggaatccattttaatggacactctggaagacaac
atcccgagggccagagcaggccactgctctgtagcaattaattccaggctgtatatctgg
agcggcagggatggctaccgcaaggcctggaacaaccaggtgtgctgcaaagacctctgg
tacctggagacagaccgcccccatgcaccgtcacgagtgcagctggtccgtgccaacacc
agctctctggaggtgagctggggtgcggtgcccaccgccgacacctacctgctgcagctg
cagaaatatgacatccccgccgcaacagcggccacctctccaaatgtcactcccacttcc
tctctaccagccaactcgcctaagagtccagccccggctgctgctgcccctgcctcacag
agcatgcctctcactggcgtcacacttgttcaacagactccatcgcctaccacttccatg
cctggcagcccacttgctgcagcctcaccccgaggtccagccattctaaaggtggctgca
cctcagtcgaccgctgggacctccattgtcactgtacgtcaggccaatcaagtggggaag
tctccagtcactgttacatcacttcctgcaggagtccgtatggttgtccctgcgcagagc
actcagggaacaccgattggcagcagcccacagatgagtggcatggctgccctggctgca
gccgccgccgctacacaaaagataccgccctcctctgcggccactgtgctgaatgttcca
gccggagccaccatagtcaagactgttgctgtgactccaggctctacaactctaccagct
actgtgaaagtggcttcgccagtgatggtgagcaacccagcaacccgcatgctgaagaca
gctgctgcccaggttgggacatcaaccatctctactcccaataccccaacccgccccgtc
attactgttcacaaatcgggcactgtgacggtagcccagcaggcccaggtggtcacaaca
gtggttggtggtgtcaccaaaacaattaccctcgtcaagagccccctcactgttggcagt
ggtggaactctgatctctagcctggggaaggtgatgtctgtggtccagaccaaaccagta
cagacatctgcagtaactggtcaagccggtagtagtcctgtcactcagatcatacagaca
aagggtcctctacctgcaggcaccatcctgaagctggtcacctctgcagatggcaaaccc
accactatcatcacaaccacgcaggcaggtggcactggcaccaaacccactatcttgggc
atcagtggagtctccccaagcacagccaccaaacctggcaccaccatcatcaaaaccatc
cccatgtctgccatccagcagggagctgcaggtgctgccggtagccctggcttaaaatct
cccattaccatcatcaccaccaagatggtgacacctggcactggcacaccaggcaaaatc
attacagctgtaccgaaactgaccacaggaactggccaacagggggtgacacaggtggtc
ttgaaaggggcacctggacaacctggcaccattctgcgcactgtgcccatgggtggcgtg
cgtcttgtttctcctggtgctgtttctggagtcaaacccacagttaccacactagtagtc
aaaggcaccacaggagtaactactcttggcacagtgaccggcacggtctccaccagcctg
gcagggggcaatgttgttacttccaatgctagcctggctactcctataaccaccctgggt
aacattgcgacactatccagtcaggttatcagccccacagccatcacagtgtccgcagct
caaacaagcctgactactgcgtcctctgtggccctgcaggcagcggcgcaaccaactcag
gtgactctaattagcacccctagtggtgtggaggcgcaacctgtgcaggatcttcctgtc
tccatcctggcatctcccacctctgagcagccctcctccacgggggcagaagccagcgag
accacaggtgaagtgactctggtgtgctccaacccaccctgcgagactcatgaaactggc
accaccaacacacccactgtggctgctgccaagatatgttctaacccaccctgtgagacg
catgtgacaggtaccaccaacacgacaactacggcctcggccaacatgggacgtgttcag
caggtgtgcagcaatcccccgtcagagacccatgacacaggcaccacgaacacggccact
actgccagctgcagcatgggctcccttgaaatgggggtcgttaatagcagtacggcgtcc
caacagtccaccatgacctcacctggaagtacacttctgtctccggtatgttctaatcct
ccatgcgagacgcatgagacgggaaccactaacacacccacacaggcgtcctcgagcatg
ggcagtgggcagaccaacacagtacagagagtatgttccaacccgccccgtgagacacat
gaaacgggcactaccaacacacccacgcaggcgtcctcaagtatgggcagcgggcagacc
aacacagtacagagagtatgttccaacccgccccgtgagacacatgaaacgggcactacc
aacacacccacgcaggcgtcctcaagtatgggcagtgggcagaccaacacagtacagaga
gtatgttccaacccgccccgtgagacacatgaaacgggcactaccaacacacccacgcag
gcgtcctcgagcatgggcagtgggcagaccaactccgtacagagagtatgttccaacccg
ccccgtgagacacatgaaacgggcactactaacacacccacgcaggcgtcctcaagtatg
ggcagcggacagaccaacactgtgcagagagtatgttccaacccgccctgcgagacccac
gagaccggcaccaccaacacacccacccaggcttcatcctccatcggagctgtgcaaaac
ggcgcagtgcaaagagtgtgttccaatccaccctgcgaaactcacgagaccggaaccacc
aacacagccactactgccaccagcagcctggagtcagccgaagacacagctcaacaaagt
gctgaaggacaagaagacagtggcaccagtgttgaggcaacttcatccacagagcctgcc
aatcctacaatccagagcagagctgtcaccatggtgactcaggccacacccaccccaggg
ccctctgtcccagagatctcatccatggcaggttctgctgccatagtggaggcctcgggt
gaaggtgaggcagaggcgatggaacagggtgactcggaagcagtggcaacgggcgaggag
cccatgcagactgaaggcgagctgggtgaagagggcaccgtcagagttgttgctattgaa
cagggtgcttccggtgaggcaggaaccatgctacaggtgcatgtagccatggaagcgcag
cctggtcaaggcgaacaggccgagatggagcaaggtggagagggtgaagaggccgtgggt
ctggccgggcaaaactcggaggctttagcactgccccaagagctgatgtctgctgaggga
cagcccacaacattgatggtgacaggactgaccccagaggagctggctgtcactgcagca
gcagaagctgctgctcaggctgcagccacagaggaggcccaggccctcgccatacaggct
gtgctgcaggcagcccaacaggctgtgctgaatgaaggggatgctggacaggatggtcag
cagtcaaccaccatccccattgtgctgacacagcaggagctggctgctctcgtcgagcag
cagcaacagctgcaagaggcccaggctgcagcagccgctgcccagcagctggcggctgat
tcaggttccacagctctgcccaccgagggcctcgcccccgcagacagtctaaacgacccc
acgtccgaaagcaatggccacgagatgactgctgctgctgtagtcaccggagctgtggct
cgacttcttcccagcacaactgcagagactttggctccatcgagtacatttgccccatcc
cagccaatggcagtggctagccctgctaagatgcaagcagctactgctcttaccgaggtg
gccaatggcatagaatctgcagctgggaagcaaggaccgccccctgcagttgtgaaacca
ccagtaaagaaagaaaatcagtggtttgatgtcggaattgtcaaggtgaccaacatggtt
gtcacacattattacatgccagcagatgattcggaggttactgatgatgattctgggacc
ataccagattacagccaaatgaagaaagtggagctttctcctggcacagcgtacaagttc
cgagtggctggtattaacgcttgtggccgtggaaccttctctgaagtgtcagccttcaaa
acctgtctacctggtttccctggagcaccatgtgccattaaaatcagcaagagcccagac
ggcgctcacctcacatgggagcccccatcagtaacatcggggaagattattgagtattca
gtctacctggctatccagagctcgcagacaaccgaggccaaagcgtctgcgcctgcgcag
ctagctttcatgcgtgtgtactgtgggcccaatccctcttgtctggttcagacttccagc
ctgtccaatgcccacattgactacaccaccaaacctgcaattatcttccgcatcgcagct
cgcaacgagaaaggctatggccctgccacgcaagtcaggtggctacaagaaaccagtaag
gatggatctgctgccaaacctgcagtaaagagaccggtctcatctcctgatgtgaaaggt
attggtgtaaaaaaggcccgagctgaccagtga
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integrated database retrieval system