Colossoma macropomum (tambaqui): 118813912
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Entry
118813912 CDS
T09004
Symbol
rexo1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118813912 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmao03009
]
118813912 (rexo1)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
Pre-60S particles
RNases
118813912 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
118813912
NCBI-ProteinID:
XP_036435414
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MLRSTGFFRGVECPLPGCDRPYCHFRHSRPPAGLSGFKRTRETPAGSNDQGYDPFSPEVV
RPGEQYNAEASDPSAGSALDPGAMELELVNRAIEAVRSEMEKDKKKLSQIGDQGYEPSNS
SGKAGYKRQVASASSSHNAYDPGSYQMGQASDYNPTPRSSKYTLDSETSSHANSMEYVPT
AVSKPGVKKAPAAASRVPVTLPVSSSSKCKYTLDNSKPSTDMEYDPLSNFSAKLASKSGK
EVDGRKRTHPAGWEKQSMDEEYVPTVKKPRQILQSATDPPKYTASFTESDEESSGTEYRP
TPVSRLKCRKSSVGSMEEDSRRSVADGSGAHKQPQEPAAEAFESDFDSEEANDKPPDKKV
IGRSVQAKSSKSEKPKKESKESGKKSSSSSHKEKKGSSTVEKPLKKTIQESVKKEKNHGK
TTEEKVRSKERDSDGACKEGKEGKSKKVEKVRAEKERVGGDAKRAKTDKVDQSKKESSKY
KEQKNGKLDSGGQRDKDKKRNSSSSSSSKDKSKKSNSSLEAKVPKAKPRSLSHADLFGDE
SPEEEEEEEDEEDERIVRKSASAFKRGALITNKRKASEAAAFSSEDDDGPEDEGEGGDDD
VDHGDDDDEDVDDTSLDYAALQADVDYDSDPMEECLRIFNESKDVKTEDKGRQAKQPPKE
EQEDQDAHSTLTTLFPGQKKRVSHFKAKGNEETSLNMLPKPQRRLTAQEVCYQRMQVAQQ
QAAQLAAAVKTVSASSGSTPSSAFSGEKRRVMHRPNPSLISAKSGLADAQRAGRGVLSPT
RTVPDQLSVKAHTSAGMLSKTVSTSAQRRVAHTPTLKSSSMKRPVIPTEFGAKVPTNVRQ
RYLTVFIDECLKFCPSEEAAFQMGLDEEKLVYDRSSSKNIYLNVAVNTLKKLRSKSVATS
SPTTKKAGASVNKKVQSHEGVLGGRLAATTSYTINRLGKQQDMNLKGAVLYRKLKPYILT
EEQLQEHGYPRPHPERLGHAVIYNLPEKKNNDPFSKVCCRCGAEYKVNALGSCVRKEECS
HHWGRLRRYRVPGGWETQYSCCSGAVGSPGCQVAKQHVQDARKESLDGYVKTFSKSLPAD
GNGGVYALDCEMCYTKQGLELTRVTVINSDLKVVYDTFVKPESKVVDYNTRFSGVTEEDL
ENATMRLRDVQAVLLNMFSAESILIGHSLESDLLALKLLHSTVVDTAVVFPHRLGLPYKR
ALRNLMADYLKRIIQDNVEGHDSSEDASACMELMIWKIKEDAKVKR
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtccactggctttttccgcggggttgagtgtccgctgcccggctgtgacaga
ccctactgccacttcagacactcacgaccaccggctggactcagcggctttaagaggacc
agagagaccccggcaggctcgaacgaccaaggttatgatccgttcagtcctgaggtggtt
agaccaggagagcagtacaatgcagaggcatcagatccttcagcaggttcggctttggac
ccaggggccatggagctggagctggtcaaccgggccatcgaggcggtgcggagcgaaatg
gagaaggacaagaagaagctctctcagattggggaccagggatacgagccttccaacagc
tccggtaaagcaggttacaagagacaagtggcttctgcttcatcatctcataacgcttat
gatccggggagttatcagatgggccaagcttcagactacaaccctacgccacgatccagc
aaatacactctggattcagagaccagcagccatgccaattcaatggagtacgtacctaca
gctgtctccaaacctggagtgaaaaaagcccctgctgcagcgtcccgcgtccctgttacg
ctccctgtgtcttcctcctcgaagtgtaaatacacgctggacaattccaaaccctccacg
gacatggagtatgatccactttcaaacttttctgctaaactggccagtaagagcgggaaa
gaggtggacgggagaaagagaacgcatcccgcaggctgggagaagcaaagcatggacgag
gaatacgttcccactgtaaagaagcccagacagatcctccaaagtgcgacagatccccca
aagtacacagccagcttcaccgagtctgatgaggaaagctctggaacggagtaccggccc
acgcctgtgagccgtctgaagtgtcggaaaagcagtgtgggctccatggaggaggacagc
aggagatccgtagcagatggcagtggtgcacacaaacaacctcaggaacccgcagcagaa
gcctttgagtctgattttgattctgaggaggcaaatgacaagccgcctgataaaaaagtg
atcggacgcagcgtccaggcgaagagtagtaaatcagaaaagcccaagaaagagagcaaa
gagtctggaaagaagagcagcagcagcagccataaagagaaaaaagggagctccactgtg
gagaaacccttaaagaagactattcaggagagtgtgaaaaaggagaagaaccacgggaag
accacggaggagaaggtccgatccaaagagagggattcagacggagcgtgcaaagaaggg
aaagagggaaagagcaagaaggtggagaaggtgagggcagagaaggagcgagtcggcggg
gatgccaagagggccaaaacagacaaggtggaccaaagcaagaaggagtctagcaaatac
aaagaacagaaaaatggaaaattggacagtggtggacaacgagacaaggacaaaaagaga
aacagtagcagcagcagcagcagcaaagacaagagcaaaaaaagcaactcctccttggag
gccaaagtgccgaaggccaagccgcgttccctgagtcacgctgaccttttcggagatgag
agccctgaggaggaggaggaggaagaagatgaggaggatgagcggatagtgaggaagtct
gcctcggctttcaaacgaggcgctctgatcactaataagagaaaagcttcagaagctgct
gccttttcatcagaggatgatgacgggcctgaagatgaaggggagggaggtgatgatgat
gttgatcatggtgatgatgatgatgaggatgttgatgacacttccttggactatgccgcc
ctgcaggcggatgtggactatgactctgatcctatggaggaatgtctgcggatctttaac
gagtccaaggatgttaagacggaagacaagggcaggcaagctaaacagcctcctaaggag
gagcaggaagatcaagacgcacacagcactttaaccacactcttccctggccagaagaag
agagtttcacattttaaggccaaaggaaacgaggagacatcactgaacatgttgccgaag
ccgcagcggaggctgaccgcgcaggaagtgtgttaccagcgcatgcaggtcgctcaacag
caggcggcgcagctcgccgcagccgtgaaaactgtgtccgcgtcctctggctccaccccc
agctctgccttttcaggagagaagaggagagtgatgcatcggcccaacccctccttaatc
tctgcaaaatctggtttagcagacgcacagcgggctggccgtggggtactgtcacccacc
aggacggtaccggatcagctgtcagtcaaagcccacacatccgccggcatgctgtccaaa
actgtgtccacttctgcacagaggagagtggctcacacccctaccctcaagagctcttct
atgaagcggccagtaattcccacagagtttggagccaaagtgcccactaatgtccgtcag
cgctacctcaccgttttcattgacgaatgtcttaagttctgtccctcagaagaggccgct
ttccagatgggtctggacgaggagaagctagtgtatgacagaagcagcagtaaaaacatc
tacctgaatgttgcagtgaacacactgaagaagctccgcagcaagagtgttgccacttcc
tctcccaccaccaagaaggccggtgcgtcagtaaataagaaggttcagtctcatgagggt
gttctgggcggccggctggcagctacgaccagctataccattaaccgcttgggcaaacag
caggacatgaacctcaaaggtgcagttctgtaccggaaactgaaaccgtacattttgact
gaggagcagctgcaggaacacggttaccccagacctcatccagagcgtttgggtcatgca
gtcatctacaacctccctgagaagaaaaacaacgaccccttctctaaggtgtgctgcagg
tgtggagccgaatacaaagtcaacgccctcggcagctgcgttcgcaaagaggagtgcagc
caccactggggcagattacgcagatacagagtgccgggagggtgggagactcagtacagc
tgctgttccggtgctgtgggctctcctgggtgtcaggtggctaaacaacacgttcaggac
gcccgtaaggagtctttagatggttacgtgaaaaccttcagcaagtccttaccagccgac
ggcaacggaggcgtctacgctttggactgtgagatgtgctacacaaagcaaggcttggag
ctgaccagagtgacggtcatcaactcggaccttaaagtggtttatgacacatttgtgaaa
cctgagagtaaagtggtggactacaacacacggttctcgggtgtgacggaagaggattta
gagaacgctacgatgaggctgcgagacgtccaagctgttttactgaacatgttcagcgct
gagtccatcctgatcggccacagtctggagagtgacctcttagcccttaagctgctgcac
agcacggttgtagacacggctgtagttttccctcaccgcctcgggctgccctacaagcga
gctctccgcaacctcatggctgactacctcaaacgcatcatccaggacaacgtggaggga
catgactccagcgaggacgcctccgcctgcatggagctcatgatatggaagatcaaagag
gatgccaaagtcaagagatga
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