Colossoma macropomum (tambaqui): 118813960
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Entry
118813960 CDS
T09004
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118813960 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmao03310
]
118813960 (rorca)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118813960 (rorca)
Nuclear receptors [BR:
cmao03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118813960 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118813960
NCBI-ProteinID:
XP_036435494
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All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGGTGAVSLPPRGG
DEVGENGNSGHGRAYSRSSSSTALSDLDDIGALPDSLLFDLPLTPEGAGEYCSLEMLGGS
RGSSSSSQSSPEQSGQEFSDTPHIKHEYELLHETGMYTHSPLNGQPDGCSLLEIERITQS
VVKSHIETSQYSPEELKRLTWNFYTAEETRTYQNKQTEVMWQQCAVHLTNAIQYVVEFAK
RITGFMDLCQNDQIILLKAGCLDVLLIRMCRVYNPLNHTLLFDGKFASPQLFKTLGCDDL
VNAVYELAKSMSRLQLTEEEMALFSAAVLLSPDRPWLTDSQRVQRLQEKVYLALQYCLNR
GGTSEEKLTKMVAKLPMMKSICNLHIDKLEFFRLLHPETAYNFPPLYREVFGSEITFPDS
TEG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaggtgataccttgtaagatctgcggtgataaatcgtcaggtatt
cattatggagtcatcacctgtgaggggtgcaagggtttcttccgccgcagtcagcagaac
aacgccatgtactcatgttctcggcagaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgtctgcagaagtgtctggcactcggcatgagccgcgacgctgtg
aagttcggccgcatgtccaaaaagcagcgggacagcctgtacgcggaggtgcagaagcac
cagcagtctcaggagcgggccgggggcactggggccgtctctttgcccccccgcggggga
gatgaagttggagagaatggtaacagtgggcacggaagagcatacagccgcagcagctcc
agcacggccctcagcgacctggacgacatcggagcgctgccggacagcctgctgttcgac
ctgccgctgacaccagagggtgccggagagtactgcagcctggagatgctggggggcagc
aggggcagcagctcctcctctcagagctcccccgaacagagcggacaggagttcagcgac
acaccccacatcaaacacgagtacgagctgctccacgagaccggcatgtacacacactct
ccactcaacggccagcctgacggatgctccctgctggagatagagcgtatcacccagagt
gttgtgaaatcccacatcgagacgagtcagtacagccccgaggaactgaaacggctcacc
tggaatttctacacagctgaggagactcgcacctaccagaacaagcagacggaggtgatg
tggcagcagtgtgcggttcacctcactaacgccatccagtacgtggtggagttcgccaag
cgcatcaccggcttcatggatctgtgtcaaaacgaccagatcatcctcctcaaagcaggc
tgtctggacgtgttgctgatccggatgtgtcgagtttataaccccctcaaccacaccctg
ctgtttgatgggaagtttgcgagccctcagctctttaaaacactcggctgtgatgacctg
gtgaatgctgtgtatgaactggccaagtccatgagccgcctgcagctcaccgaggaggag
atggctcttttcagcgccgctgtcctcctctctccagaccgaccatggcttacggatagc
cagcgggttcagaggcttcaggagaaagtctacctggcactgcagtactgcctgaacaga
gggggcacctcagaggagaaactgaccaagatggtggctaagctgcccatgatgaagtca
atttgcaaccttcacattgacaaactggagtttttccgcctgcttcaccccgaaacggcc
tacaatttccctccgctctaccgggaggtgtttggtagcgaaatcaccttccccgactcc
actgagggctag
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integrated database retrieval system