KEGG   Colossoma macropomum (tambaqui): 118813960
Entry
118813960         CDS       T09004                                 
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
  KO
K08533  RAR-related orphan receptor beta
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmao03000]
    118813960 (rorca)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cmao03310]
    118813960 (rorca)
Transcription factors [BR:cmao03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    118813960 (rorca)
Nuclear receptors [BR:cmao03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   118813960 (rorca)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 118813960
NCBI-ProteinID: XP_036435494
LinkDB
Position
Unknown
AA seq 483 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGGTGAVSLPPRGG
DEVGENGNSGHGRAYSRSSSSTALSDLDDIGALPDSLLFDLPLTPEGAGEYCSLEMLGGS
RGSSSSSQSSPEQSGQEFSDTPHIKHEYELLHETGMYTHSPLNGQPDGCSLLEIERITQS
VVKSHIETSQYSPEELKRLTWNFYTAEETRTYQNKQTEVMWQQCAVHLTNAIQYVVEFAK
RITGFMDLCQNDQIILLKAGCLDVLLIRMCRVYNPLNHTLLFDGKFASPQLFKTLGCDDL
VNAVYELAKSMSRLQLTEEEMALFSAAVLLSPDRPWLTDSQRVQRLQEKVYLALQYCLNR
GGTSEEKLTKMVAKLPMMKSICNLHIDKLEFFRLLHPETAYNFPPLYREVFGSEITFPDS
TEG
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagagctcaaatcgaggtgataccttgtaagatctgcggtgataaatcgtcaggtatt
cattatggagtcatcacctgtgaggggtgcaagggtttcttccgccgcagtcagcagaac
aacgccatgtactcatgttctcggcagaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgtctgcagaagtgtctggcactcggcatgagccgcgacgctgtg
aagttcggccgcatgtccaaaaagcagcgggacagcctgtacgcggaggtgcagaagcac
cagcagtctcaggagcgggccgggggcactggggccgtctctttgcccccccgcggggga
gatgaagttggagagaatggtaacagtgggcacggaagagcatacagccgcagcagctcc
agcacggccctcagcgacctggacgacatcggagcgctgccggacagcctgctgttcgac
ctgccgctgacaccagagggtgccggagagtactgcagcctggagatgctggggggcagc
aggggcagcagctcctcctctcagagctcccccgaacagagcggacaggagttcagcgac
acaccccacatcaaacacgagtacgagctgctccacgagaccggcatgtacacacactct
ccactcaacggccagcctgacggatgctccctgctggagatagagcgtatcacccagagt
gttgtgaaatcccacatcgagacgagtcagtacagccccgaggaactgaaacggctcacc
tggaatttctacacagctgaggagactcgcacctaccagaacaagcagacggaggtgatg
tggcagcagtgtgcggttcacctcactaacgccatccagtacgtggtggagttcgccaag
cgcatcaccggcttcatggatctgtgtcaaaacgaccagatcatcctcctcaaagcaggc
tgtctggacgtgttgctgatccggatgtgtcgagtttataaccccctcaaccacaccctg
ctgtttgatgggaagtttgcgagccctcagctctttaaaacactcggctgtgatgacctg
gtgaatgctgtgtatgaactggccaagtccatgagccgcctgcagctcaccgaggaggag
atggctcttttcagcgccgctgtcctcctctctccagaccgaccatggcttacggatagc
cagcgggttcagaggcttcaggagaaagtctacctggcactgcagtactgcctgaacaga
gggggcacctcagaggagaaactgaccaagatggtggctaagctgcccatgatgaagtca
atttgcaaccttcacattgacaaactggagtttttccgcctgcttcaccccgaaacggcc
tacaatttccctccgctctaccgggaggtgtttggtagcgaaatcaccttccccgactcc
actgagggctag

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