Colossoma macropomum (tambaqui): 118814116
Help
Entry
118814116 CDS
T09004
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04010
MAPK signaling pathway
cmao04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118814116
04020 Calcium signaling pathway
118814116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118814116
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118814116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118814116
NCBI-ProteinID:
XP_036435670
LinkDB
All DBs
Position
Unknown
AA seq
2235 aa
AA seq
DB search
MARFGDDVPGLLVAVDTGSERSRTREAPAVSTGGVSPVFKQTKAQRARTMALYNPIPVRQ
NCFTVNRSLFIFSEDNVVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPM
SKKLEKTEPYFIGMFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGTHM
NIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGRLHSTCLPEPDIRENETVAVWEAEFPCGFRQCPHKYNCTGNWVGPNDGITQFDNI
LFAVLTVFQCITMEGWTTVLYNANDALGPSWNWLYFIPLIIIGSFFVLNLVLGVLSGEFA
KERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATT
IKRRGVDTIRRGPEEQYGDIASVGMPLNRASIRSAKRGPTAYFRRKERMLRISIRRMVKT
HTFYWTVLGLVALNTLCVAIVHHKQPLLLSNFLYYAEFLFLGLFLTEMFLKMYGLGPRLY
FHSSFNCFDCGVIVGSIFEVIWGFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVS
LMNSMKSIISLLFLLFLFIVVFALLGMQLFGGRFTFEDYTPTNFDTFPAAIMTVFQILTG
EDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEEEEAFNQKHALQKAKEVGHMSSFMSSERRRRPYLYRKRAIHRSRAAYSLEESDPPPLN
ASNSFMSRRERRRRMTMSVWEQRTSQLRRHRQMSSREILYSSTNEERDGQGALQHNRPAA
SPSHSVRRSAETSRQTSLNLRRPAETETQTSLSVRRPSDAPLEPVGPLDLSLGEEDISIP
LPEPPMALDIPLPELQLPESEASSCGSQAVSHLRLNGERRQRAIRKHRPTDSGSKLRKPR
QPRDTEGDHSRSSSQERRNEGEEEEEKKNSNDGRISPDGIMAEKREPGDSEPATLQITDS
TVLEHTAATRGATEGENNNTPASLGQDKASLMIEVTDPQQGLELSITANSKDLEASKSEK
EDEEVPNSSKAPPPNSMFIFKPRNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPV
ATNSDWNKVLRYFDYVFTGVFTFEMIIKMIEQGLILHDGSYFRDLWNILDFIVVIGALVA
FALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVY
KLFMFIFAVIAVQLFKGKFFYCTDGSKDTEKDCQGYYIDYDKDKKEVKRREWKRHEFHYD
NVVWALLTLFTVSTGEGWPQVLQHSVDVTDEDQGPSRGNRMEMSIFYVIYFVVFPFFFVN
IFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTLQYRLWHFVV
SPSFEYTVLTMIALNTIVLMMKYHQAPELYDTALKHLNTAFTVLFSVECVLKILAFGFMN
YFRDTWNIFDFITVLGSITEIVVELQSASFNMSFLKLFRAARLIKLLRQGYTIRILLWTF
VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLKEETHINQHNNFKTFFGALMLLFRSA
TGESWQEIMLSCLGGQGCETDPSLIPTAEPEGGCGTDFAYFYFVSFIFFSSFLMLNLFVA
VIMDNFEYLTRDSSILGPHHLDEFVRMWGQYDRAACGRIHYTDMYEMLTYMSPPLGLGKK
CPSKVAYKRLILMNMPVDEEMTVHFTSTLMALIRTALEIKIARGGEDRGEMDIELQKEIS
VIWPHLSQKALDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQ
RMDASSLPQEILSSAKALPFLTHSAGSALTRGGFVALSPVSPQELFMQPLSPEPDEENYH
LQYHPQQDTVPEHRDFSRMLQVPERAVSIRASSMPRLAVEPQASSESKLMKRSFSTIGDQ
CVNGVWQEEFSLERVSPDRLERPRQRSFRGVRSNLKEAAGRERGRSKERKRLLSPDPSRC
NSEDRSQTRDTHTRSPSQGRTHTPHIQGESSASPLHSDTGTPRGRRQLPQTPSRPRPHIS
YSPLVCRAHPSAEDGQSRTQPSGEGEEPRWAEEPLSRGAGPGAISHASPQRYISEPYLPL
HEDFNSPDSSCPEETLTFEVAIATSLGRSNAISSAPQLRHTWQVPNGHFRKRLAQATGGT
SGCELLSDTDEDDRC
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atggcacggttcggggacgatgttccggggctgctggttgccgtggacacggggtccgag
cgcagccgcacccgcgaagcccctgccgtctccaccggaggggtttcgcccgtcttcaaa
cagacgaaagcgcaaagagcgcgcacgatggccctgtataaccccatccccgtccggcag
aactgctttaccgtcaacaggtcactcttcatcttcagtgaggataatgtggtcaggaag
tacgccaagaagatcatagagtggcctccgtttgagtacatgattctggccaccatcatc
gctaactgcattgttctggcactggagcagcacctgcctggagaggataaaacaccaatg
tccaaaaaactggagaaaactgagccgtacttcattgggatgttttgttttgaagctgga
ataaagatcgtggctctgggattcgtattccataaaggatcctacctgaggaacggctgg
aacgtgatggacttcattgtggtgctgagcgggattctagctactgcagggactcatatg
aacatcccagtggaccttcggacgctgagggccgtgcgtgtgctgaggccactgaagctg
gtgtccggaatccccagtctgcagatagtactgaagtccatcatgaaggccatggtgcct
ctgctacagattggtctgttgctgttcttcgccatcctcatgttcgccatcatcggcctg
gagttctacagcggccgtctgcacagcacctgcttaccagaaccagacatacgagagaat
gagacggttgctgtgtgggaggcagagtttccatgtggtttcagacaatgtccacataaa
tacaactgcactggcaactgggtaggccccaatgacggaatcacgcagttcgataatatt
ctcttcgccgtgctgaccgtctttcagtgcatcaccatggagggctggaccaccgtgctt
tacaatgccaatgatgccttgggtccctcatggaactggctgtacttcattccgctcatt
ataatcggatccttcttcgtgctgaacctggtgttgggagtcttgtctggggagtttgcg
aaggagagagaacgagtggagaatcgacgggcgttcatgaagctgcggcggcagcagcag
atcgagcgcgagctgaatgggtatagagcctggatcgacagggcagaggaggtcatgttg
gcggaggagaataaaaactctggcccgtctgccctggatgtgctgaagagagccaccacc
ataaagaggcgaggtgtggacactatcagacgtggtccagaggagcagtacggagacatc
gcttctgtaggaatgcctctgaacagggcgagtatccgcagcgcgaagcgagggcccacg
gcgtattttcggaggaaagagagaatgctgcgcatctccatccgccgcatggtgaaaaca
cacaccttctactggacagtgttgggtctggtggccctcaacaccctctgtgtggctatt
gtccatcacaaacagccactgctgctgtccaacttcctctattacgctgagttcctgttt
ctaggtctgtttctgactgagatgtttctgaagatgtatggcctcggcccccgactctac
ttccattcctcttttaactgcttcgactgtggggtgattgtgggtagtatctttgaggtg
atctggggtttcttcaggccagggatgtcattcggcatcagcgtgctgcgcgccctccga
ctgctccggatctttaaaattaccaagtactgggcatcgttgaggaaccttgtggtgtct
ctgatgaactccatgaagtccatcatcagcctgctcttcctcctcttcctcttcatcgtg
gtctttgccctgctgggcatgcagctgttcgggggccggttcacctttgaggattatact
cccaccaactttgatacgtttccagctgccatcatgacagtgtttcagatcctgaccggt
gaagactggaatgaggtgatgtacaatggaattcgctctcagggtggagtcaagtcagga
atgtggtcctccatttacttcattgtcctcacgctgtttggaaactacacactcctcaat
gtcttcttggctatcgctgttgacaatttagccaatgcccaagagctcacaaaggatgag
gaggaggaggaagaagcttttaaccagaagcatgccctgcagaaggcgaaggaggtcggg
cacatgtcctccttcatgtcctcagagaggaggaggaggccctacctgtacaggaagcga
gcgatccaccgcagccgagcggcctactctctggaagagtcagaccctcctccactcaat
gcctctaactctttcatgtccaggagagagaggaggcgccggatgacgatgtccgtgtgg
gagcagaggaccagccagctccgccgccaccggcagatgtccagccgggagatcctgtac
agcagcactaacgaggagcgggatggccagggcgcgttgcagcacaaccggcctgctgcc
tcgccctcgcacagcgtccgccgttccgcggagacatccagacagacatcactcaacctt
agacgacccgcagaaacggagacgcagacgtccctcagcgtcagaagaccctcagatgcc
cctctggagccagtcgggccactggacctgtccctaggtgaggaggatatctccataccc
ctaccggaaccgcccatggccctggacattcctctcccagagctgcagctgcccgagtca
gaagcctcctcttgcggttctcaggcagtcagccatctgaggttgaatggagagaggagg
cagcgagcgatccgtaagcacagaccgacagattctggctctaagctccggaaaccacgg
caacccagggacacagaaggggaccacagtcgctccagcagccaggagaggaggaacgag
ggagaggaagaggaggagaagaaaaacagcaatgatggacgaatcagtccagatggcatc
atggctgagaagagagagcctggagattcagagccagccacactgcagatcactgacagc
actgtgctggagcacacagcggccaccaggggcgctaccgagggtgagaacaacaacacc
cccgcctctctgggtcaggataaggcgagtctgatgatagaggtgactgaccctcagcaa
ggcctggagctgtccattacagcgaacagcaaagacctggaggcctcgaagtcggagaag
gaagatgaggaagtgccgaactcttcgaaagctccgcccccgaacagcatgttcatcttc
aaaccccgcaatcctatccgcagggcctgtcactacgttgttaatctccgttactttgag
atgtgtatcctgttggtcattgctgccagcagtattgctttagctgctgaagatccagtg
gccacaaactccgactggaacaaagtgcttcgttactttgattatgtattcactggagtc
ttcacctttgaaatgataatcaagatgatcgagcagggtctgatcctgcacgatggctcg
tatttccgggacctgtggaatattctggatttcatcgtggtgatcggagcgctggtggct
ttcgccctcacgaatgttctggggaataataaagggagagacattaaaaccattaaatct
ctcagagtgctgcgggttctcaggcccttgaagaccattaagaggctccccaagctgaag
gcagtgtttgattgtgttgtgacgtctctgaagaacgtctttaacatcctcatcgtctac
aagctcttcatgttcatctttgcggtcatcgcagtccagctttttaaaggaaagtttttc
tactgcactgatggatccaaagatacagagaaagattgccagggctactacatcgactat
gataaagataagaaggaggtgaagaggagagagtggaagagacatgagtttcactatgat
aacgtggtctgggctctgctgaccctcttcaccgtctccactggagaaggatggccccaa
gtcctgcagcactcggtggacgtgacggatgaagaccagggtccgagccgagggaaccgg
atggaaatgtccattttttacgtcatttactttgtggttttcccctttttctttgtgaat
atattcgtagccctcatcatcatcacgttccaggagcagggtgataagatgatggaggag
tgcagcctggagaagaacgagagagcttgcattgactttgccatcagtgccaaacccttg
acccgctacatgccccagaaccgccacaccctccagtaccgtctgtggcactttgtggtt
tcgccttcgtttgagtacactgtgctgaccatgatagccctcaacaccatcgtcctcatg
atgaagtaccaccaggctcctgagctttatgatacggcgctgaaacacctgaacacggcg
ttcaccgtcctgttctctgtggagtgtgttctcaagattttggcgtttggttttatgaat
tacttcagggacacgtggaatatctttgacttcatcacagtcctggggagcatcactgaa
atagtggtggaactgcagtctgcatcctttaacatgagcttcctgaagctgttccgagcg
gctcgtctgataaagctgctgaggcagggttacaccatccggatcttactctggaccttc
gtccagtcctttaaggctctcccgtacgtgtgtctcctcattgccatgctgttcttcatc
tacgctattattgggatgcaggtcttcgggaatataaagctaaaagaagaaactcacatt
aatcaacacaacaacttcaagaccttctttggtgccttgatgttactgttcaggagtgcg
acgggtgagtcgtggcaggaaatcatgctgtcatgtttaggggggcagggctgcgagact
gacccctctctgatccccacagccgagcctgaggggggctgtggcaccgacttcgcctat
ttctatttcgtctccttcatcttcttcagctcttttctgatgctgaacctgtttgttgct
gttataatggataattttgagtacctgacgcgtgactcctccattctgggtccccatcat
ctggatgaatttgtgcggatgtgggggcagtatgatcgagctgcctgtggccgtattcac
tacactgatatgtacgagatgctgacctacatgtctccgccgcttggcctgggcaagaaa
tgcccctccaaagtggcttataagaggctgattctgatgaacatgccggtggatgaagag
atgacggtgcacttcacctccaccctcatggccctgatccgcacggcgctggagatcaaa
atcgctcgaggcggtgaggacaggggtgagatggacattgaacttcagaaggaaatcagt
gtcatctggcctcacctctcccaaaaagcactggacctgcttgtgcccattcacaaagcc
agtgatatgactatagggaaaatctatgcagccatgatgatcatggactactacaaacag
agcaaagccaagaagctccggcagcagctggaggagcagaaacacgcgccgatgttccag
cggatggacgcttcctcactgccgcaggagatcctctccagtgctaaggccctgccgttc
ctcacacacagcgcaggatctgcactgacgagaggaggtttcgtagctctgagtcccgtc
tcccctcaggagctcttcatgcagcccctgagtccggagcccgatgaggaaaactaccac
cttcagtaccacccacagcaagacacggtgccagagcacagagactttagccgcatgctg
caggtgccagagagagccgtgtctatccgagcctcctccatgcctcggctggctgtagag
ccacaggcaagctcagagagtaagcttatgaagcgctctttctccaccattggtgatcag
tgtgtgaacggcgtttggcaggaagagttttccctggagagggtcagtcctgaccggctg
gagagacccagacaaagaagcttcagaggtgtcaggtctaacctgaaggaggcagcaggg
agagagagggggcgatcgaaggagaggaagcggctgctctctccagatccgtctcgctgt
aactcagaggacaggagccaaacacgagacacacacacacgctcacccagccaggggaga
acacacacaccacacatacagggtgaatcctcagccagcccactgcactcagacactggg
acccctagggggcggcgtcagctccctcaaacgccttctcggccccgcccacacatctcc
tattcgccgttagtgtgccgcgcccatccgtctgcagaggacggacaatcacggacccag
ccctcaggagaaggggaggagcctcggtgggcagaggagcctctgtcccgtggggcgggg
ccaggggctataagccacgcctccccgcagcgctacatctcagagccgtacctgccgctg
cacgaggacttcaacagcccggactccagctgccccgaggagacgctcacctttgaggtt
gccatagcaaccagcctgggccgcagcaacgccataagctctgccccccagctgcggcac
acctggcaggtgcccaatgggcatttccgcaagcgtctggcgcaggcgacggggggcacg
tcggggtgcgagctgctgagcgacaccgacgaggacgaccgctgctag
DBGET
integrated database retrieval system
