Colossoma macropomum (tambaqui): 118814131
Help
Entry
118814131 CDS
T09004
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118814131 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118814131 (lsm1)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118814131 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
118814131 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118814131
NCBI-ProteinID:
XP_036435683
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILQEQRVEQQAKQESEKKKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccgggcaccgccagcctcatcgaggacatcgacaaaaagcacctggtt
ctgctgagagatgggagaacgctgattgggatcctcagaagtatagatcagttcgccaat
ttagttttgcatcagacagtggagcgaatccatgtcggtaaaaaattcggagacataccc
cgagggatattcgtcgtcagaggagaaaacgttgtcctacttggagaagttgacctcgac
aaagaatgtgaccagatcctccagagagtgtccatcgaggagattctgcaggagcagcgg
gtggagcagcaggccaagcaggagtccgagaagaagaagctgcaggcggtgaaggagcga
ggcctgtccatccccaaagccgacactctggatgatttctga
DBGET
integrated database retrieval system
