Colossoma macropomum (tambaqui): 118814332
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Entry
118814332 CDS
T09004
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03020
RNA polymerase
cmao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118814332 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
118814332 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118814332 (polr2j)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118814332 (polr2j)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118814332 (polr2j)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118814332 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
AAA_lid_12
Motif
Other DBs
NCBI-GeneID:
118814332
NCBI-ProteinID:
XP_036435777
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG
YKVPHPLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFKVAIKDRQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgccggccttcgagtcgtttttgttgttcgagggggagaaaaagattaca
ataaccaaggacactaaggtgccaaatgcctgtttgtttacgttaaacaaagaagaccac
acgctggggaacatcatcagatcacagctgctgaaggaccctcaggtgctgtttgcaggg
tacaaggtgccccatccactggagcacaaggttgttattcgtgtgcagacgacaccagat
tacagtcctcaggaagcctttacaaatgccattactgatctcatcagtgagctgtcactg
ctggaggagaggttcaaggttgccatcaaagacagacaggaaggcatcgagtaa
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