Colossoma macropomum (tambaqui): 118814387
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Entry
118814387 CDS
T09004
Symbol
lmx1ba
Name
(RefSeq) LIM homeobox transcription factor 1, beta a isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118814387 (lmx1ba)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
118814387 (lmx1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
CDC45
TLP-20
Motif
Other DBs
NCBI-GeneID:
118814387
NCBI-ProteinID:
XP_036435864
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MASEADLWSVQRCFSADGQSSCVKMLDGIKIEEQLRTGPAALGVMLAGAECHPQNVCAGC
QRPISDRFLMRVNESSWHEECLQCAVCQQPLTMSCYCRDRKVYCKQDYQQLFATKCSGCL
EKIAPTEFVMRALESVYHLGCFCCCVCERQLCKGDEFVLKDGQLLCKNDYEREKDLLNSI
SPEMSDSDKSEDEDVDAKPEKGSGGQNKGSDDSKDSRRPKRPRTILTTQQRRAFKASFEV
SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQEQQNSQRLGQEVISS
RMESLMTSYTPLAPPQQQQLVTMDTNGYSTDPFQQGLTPPQMPGDHMNPYGNDSIFHDID
SDTSLTSLSDCFMAASETGSLQARMGNPIDRLYSMQSSYFTS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgaggcggatctctggtcagtgcagaggtgcttttccgcggacggtcagtcg
tcttgtgtcaagatgttggacgggatcaaaatcgaagagcagttgagaaccggacccgcc
gccttaggagtgatgctcgcaggcgctgaatgccatcctcagaatgtatgtgcaggatgt
cagagacccatctctgaccgcttcctcatgcgcgtgaacgagtcttcctggcacgaggag
tgtttgcagtgcgccgtgtgtcaacagccgctcaccatgagctgctactgcagagaccgg
aaagtttactgcaagcaggactaccaacagttgtttgccactaagtgcagcggctgcctg
gagaaaatcgctcccactgagtttgtgatgcgtgcgctggagagtgtgtatcaccttggc
tgcttctgttgctgtgtgtgtgagaggcagctgtgtaaaggggatgagtttgtgctgaag
gacggacagctgctgtgtaagaacgactacgagagggagaaagacctgctcaactccatc
agtccagagatgtcagactctgataagagcgaggatgaggatgtggatgcgaagccagag
aaaggttctggagggcagaacaaaggcagtgatgatagcaaagactctcgcaggcccaaa
cgaccccgtaccatccttaccacacagcagcgtcgtgccttcaaagcctcctttgaggtt
tcctccaaaccttgtaggaaggtgagggagactctggcagcagaaactggactgagtgtg
agagtggtccaggtgtggttccagaaccagagagctaagatgaagaagttggctcgtcga
cagcagcagcaacaggagcagcagaactcgcagagacttggacaagaggtgatatcaagc
agaatggagagtctgatgacctcctacacaccgctcgccccgcctcaacaacagcagctt
gtgaccatggacacaaatggctacagcacagatcctttccagcaagggctcactccccca
caaatgcctggagatcacatgaatccatatggaaacgactcaattttccatgacatcgac
agtgacacgtctttgactagcctgagtgactgcttcatggctgcctcagagacaggatcc
ctgcaggcccgcatgggaaaccccatcgatcgcctctactccatgcagagctcctacttc
acctcctga
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