Colossoma macropomum (tambaqui): 118814426
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Entry
118814426 CDS
T09004
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118814426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118814426
03036 Chromosome and associated proteins [BR:
cmao03036
]
118814426
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118814426
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118814426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118814426
NCBI-ProteinID:
XP_036435918
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MSTEVLRPEPVAGGSRSGGGKLGVLINKLHEFLAVSTEQGSEHSLPGHWSGAMAQDFVEQ
QQQAAAQAAKEPSSSSETKPAPAPRSKRKPLVVTKHSGLNESDVSSESETEEVLSINSSE
PDTTCLPKGTVFVLPEPVGNEVRDEFRGPEFRSKRVYKQNRDVSDRRKVGYDTERVNCTA
CGQQVNHFLRDSVYQHPALKVLICKSCFKYYMSDDISKDAEGMDEQCRWCAEGGSLIGCD
YCSNAFCKKCVLRNLGRRELSAILEEERKWYCYVCSPEPLMDLVLACDAVLQNLEKIWAR
KRSNERGNSMGRGMGGGGRGRPRGGRSGMGAVLPVGMAPSQGLCQRMQRVVEMTASLNQS
FTAFMQSEKDEEASEEEDVERARRLMMFRTILRDLREAQGELQNALDRELGASKPAGAGS
KARGRPRKGAATRGAGITKELVVKLTPVPLRRAPNANANSNVRAATAITKAEAQATRRVK
EEKVKRDEVEVRERMDGGVGVKEEVKVEDVDEETADVVLVENSEDEEDESEDLTLAEANK
RSPRVKTTPRRRRTDTDVVATHSHLAEDSDSDEVPAVLLQTTAGATSDEEGAADSDGANQ
EVRKKCLFGLVKTTPPCQDRNSRKRKLKERSSSSSSSSSSSTSASSGSGSKVRRPVVHPH
KVPKTTADSESLSSDLGGQEIESGRSSDSEYQDQKIKPLSDVTLLASGTFHQQSSGDEME
AQPSPSLVLEEDDVENRIAKQILLAQIRANLSSESDQESMSDDSEGAESEDEEGLRENNE
KEKNENLTDVSEPTDNSSDPDNPTSKPLTRHHLLSCGLAPLEAEAKGHNKDPDNLKRKKT
NQDKELIVVSSDGHDSASEESALSEELSQSEDEDKSPKEKNSASDGGAHTPTQQDAPDAA
EGGDEDVKDAEDVSGTPKGRRKIRRIMEVGQLAKETQEALREEEERRKRLEERDRQRQQE
ESREQGKDDEVMIVSERPAPNVTPLVLEQDDATRKALVQVDAHLLSKLKPHQREGVQFMW
DSCCESIVKVKESSGSGCILAHCMGLGKTLQVIAFLHTVLSCELVALKTALVVCPLNTVL
NWRAEFDKWQSGIKTHKLEVIELVTVKSVLCRVEALSMWHRKGGVMIVSYEIYRILTHGQ
QAKYAKHQQSLRTALQNPGPDVVICDEGHILRNDATGIFKAMSSIRTRRRIVLTGTPLQN
NLSEYHCMVNFVKQNLLGSLREFRNRFINPIQNGQCADSTPSDVRLMKKRVHVLHELLGG
CVQRRDYSVLTRFLPPKHEYVLSIRMTPLQCKLYAHYLQNYTGEGDGVNRLFQDFRILSL
IWIHPWCLQLSDLNKGYKVRAEDPAPVSTVTTSELSSGQKNSECAAEERRSAANTGGPSE
EEVPSMFSGPPVGWYREFVSDADAAILEHSGKLVLLMEILHLAEQLQNKVLVFSQSLVSL
DLIEKFLELADKAKREGKESLYKGEKSWLRDKDYYRLDGSTSATERKKWTQEFNNVRNTR
GRLFLISTKAGSLGINLVAANRVVLFDASWNPTYDVQSIFRVYRFGQRKPVYVYRFLAQG
TMEQKIYERQVAKQSLSSRVVDQQQIQRHFTHSQLSELYRFRPDLHPKTHNSLPSDKVLA
VLLQQCGQSIVSFHEHDSLLDHRKEEELSVEERKEAWEEYQAEETAAVQDGGEQSSAAKK
TKQEDGGQRGFFSSLWQKSNQELEAMLKKGRLDLQRALQNIESRSPDFFIHEVVSLCV
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgaggttctgaggcctgaacctgttgctgggggtagcagaagtggcggtgga
aagctgggagtgctgatcaataaactccatgaatttctggcggtgtctacagagcaaggc
agcgaacacagcctgcctggacactggagtggtgcaatggcccaggatttcgttgagcag
cagcagcaggcggcagcacaggctgcaaaagagcccagcagctcttcagagactaagcca
gcccccgcaccgcgttccaaaaggaagccgttggtggtgactaagcacagcgggctgaac
gagtctgacgtttcttctgaaagcgaaacagaggaggtcttgtccatcaactccagcgag
ccagacacaacctgcttacccaaaggtaccgtttttgtgctgccggagcctgtgggtaat
gaagttcgtgatgagttccgtggcccagagttccgcagtaaacgtgtctacaagcagaac
agagacgtttcagacagacgcaaagtcgggtatgacacggagagagtgaactgtacagca
tgcggccagcaggtgaaccatttcctgagagactcagtctatcagcacccggccctgaaa
gtacttatctgcaagtcatgttttaagtactacatgagtgatgacatcagtaaagacgca
gaggggatggatgaacagtgcaggtggtgtgctgagggaggcagtctgattggctgtgat
tactgcagtaatgctttctgtaagaagtgtgtcctgcggaatttggggaggagggagctg
tcggctattttggaggaggagcggaagtggtactgttacgtgtgtagcccagaaccgctc
atggaccttgtgttggcctgtgacgcggttctgcagaaccttgagaagatctgggcccgg
aaacgatccaacgaacgaggcaactccatgggccgaggcatggggggcggaggccgcggg
aggccgagaggtgggcgcagtggaatgggggcggtgcttccagtgggcatggcgccctct
caggggctctgccagcgcatgcagcgagtggtggaaatgacggcatcgctgaaccagtct
ttcacggccttcatgcagagcgaaaaggatgaagaggccagtgaggaagaagatgtagag
agagccaggaggctgatgatgtttcgcacaatactgcgggatctgcgcgaggcccagggc
gagctgcagaacgcactagatcgagagttgggtgcgtccaaaccagccggcgccgggtcg
aaggcgagaggtcgaccgcggaagggtgcagccaccaggggtgcggggatcactaaggag
ctggtggtgaaactgacgccggtaccattacgccgcgcccctaatgctaacgctaactct
aatgttagagctgctaccgccataaccaaggctgaagcacaggccacacggagagtgaag
gaggagaaggtgaaaagagacgaggtggaggtgcgagagaggatggatggaggggtcggg
gtgaaagaggaggtgaaagtggaagatgtcgatgaagagacagccgatgtagtgttggtg
gagaattccgaggatgaggaggatgaaagtgaagatttgacgttagcagaagcaaacaaa
cgttctccccgcgtgaagacgacgccacggcgacgacgcacggacacggacgtggtcgca
acgcactctcacctagcggaggactctgattccgatgaagttcctgctgtgttgctgcag
accacagctggagcaaccagcgacgaggaaggtgcggctgacagcgatggagcgaaccag
gaagttcggaaaaagtgtctcttcggtttggtgaaaactacgccaccttgccaagacagg
aactcacgaaaacgtaaactaaaagagagatcgtcatcgtcttcatcgtcgtcctcctcc
tcaacttctgcttcgagcggttcgggatcaaaggtcaggaggcctgtggttcacccgcac
aaggtccctaagacaacggccgatagcgagagtttgtcgagtgatcttgggggacaggaa
atcgagagtgggcggagcagtgactcggagtatcaggaccagaagattaaacccttgagt
gacgtcacgctgctggcgtccggaacattccaccagcagtcctctggagatgaaatggaa
gcccagcccagtccgtctctggtcctggaggaggatgatgttgagaatagaattgctaag
cagattctgttggctcagatcagagccaatctttcatccgagtctgaccaggagagcatg
tccgacgacagcgagggagcagagagtgaggatgaggaggggttgagggagaacaatgaa
aaggaaaagaatgaaaacttgactgatgtcagtgagccgactgataacagctctgatcct
gacaatccaacttcaaaaccactgacccgtcaccacctgctgagctgtggtctcgcccca
ctggaggcggaggctaaaggccataataaggatccagacaatctgaagaggaagaaaaca
aatcaggacaaagaactgattgttgtgagcagtgatggtcacgattcagccagtgaggag
tcagctttgagtgaggagctcagccaatcagaggatgaagacaagagtcctaaagagaag
aattcagccagtgatggtggagctcacacacctactcaacaggatgctcctgatgctgct
gaaggtggtgatgaagatgttaaggatgctgaagatgtcagtggtactcctaaaggtcgg
agaaagattcgaaggatcatggaggtgggccagctggccaaggagacacaggaggcgctg
agggaggaggaggagaggagaaagaggctggaggagagagacaggcagaggcagcaagag
gagagcagagaacaagggaaagatgacgaggtgatgatagtgtctgaaagacccgccccc
aacgtcacccctctggttctagagcaagatgatgcaacacgtaaagctcttgtgcaggtg
gacgcacacctgttgagtaaactgaaacctcaccaacgagaaggtgtgcagttcatgtgg
gacagttgttgtgagtcgattgtgaaggtgaaggagtcttctggttccggctgcattctc
gcccactgcatgggcctcggaaaaacactacaggtaatagcgttcctgcacacagtgttg
tcctgtgagctggttgcgctgaagacagcgttagtggtttgtccactaaatacagtcctg
aactggagggcagagtttgacaaatggcaaagtggcattaaaacacacaagctagaggtg
attgagcttgttacagtgaagtctgtgctctgtcgagtggaggctttgagcatgtggcat
aggaaaggtggtgtgatgattgtgagctacgaaatctaccgcatcctcacgcatgggcag
caagccaaatatgccaaacaccagcagagtctgcgaacagcacttcagaatccaggtcca
gatgtggtgatctgtgatgaaggtcacatcctgaggaacgatgcgacgggcatttttaag
gccatgagctccatccgcacacgccggagaattgtcctaacggggacgccactccagaac
aatctctcagagtatcactgtatggtgaatttcgtaaagcagaacctgctgggttctctg
cgtgagtttaggaaccgcttcattaaccccatccagaatggccagtgtgctgactccacc
ccttctgacgtccgactgatgaagaaacgagtccacgtcctccatgagctcctcggtgga
tgtgttcagagacgggactattctgttctgacccgcttcctgcccccaaaacacgagtat
gtcctgtcaatcaggatgacaccactgcagtgtaaactgtacgcacactacctacagaac
tatacaggagaaggagatggtgtgaacaggttgtttcaggattttcggattttgagtctg
atttggattcatccgtggtgcttacagctctctgaccttaacaaagggtacaaggtaaga
gcggaggatcctgctccggtctccacggtgactacgagtgaactgtcaagtgggcagaag
aacagtgaatgtgcggcagaggagaggaggagcgctgccaatactggaggaccctcagaa
gaggaagtgccgagtatgttcagcgggccaccggtaggctggtacagggagtttgtgagt
gatgctgatgctgctatcctggagcattctgggaaattagtactactgatggagatactg
cacttggctgaacagctgcagaataaagtgttggtgttcagtcagtctctagtttcactg
gatctgattgaaaagtttcttgagttggctgacaaggcaaagcgagagggaaaggaatct
ctgtataaaggagagaagtcttggttacgagataaagactactatcgcttggacggttct
accagtgcaacagagcgcaaaaaatggactcaagagttcaacaacgtcaggaatacacgt
ggacggttgtttctgatctctacaaaggccggctcattaggtatcaatctagtagctgct
aacagggttgtgctgttcgatgcttcgtggaatcctacttatgacgttcagagcatcttc
agggtctatcgcttcggacagagaaaacctgtttacgtctaccgctttctggcacagggt
acaatggagcagaagatttacgaacgccaggttgctaagcagtctctgtcgtcccgtgtt
gtggaccagcagcagatccagcgacacttcacacacagccagctcagcgaactgtaccgc
tttcggcccgacctgcaccccaaaacgcacaacagcctgccctctgataaggtgctggca
gtgctgttacagcagtgtgggcagagcatagtgagtttccatgaacacgattcgctgctg
gaccacaggaaggaggaggagctgagtgtggaggagaggaaggaagcgtgggaggagtat
caagccgaggagacggctgccgtacaggatggaggtgagcaaagttcagctgcaaagaaa
accaagcaggaggatggaggtcagcgaggtttcttcagcagcctctggcagaaatccaac
caagagctggaggctatgttgaagaaaggccgcttggaccttcagagggctctgcagaac
attgagtcccggagtccggacttcttcatacatgaagtagtgagtttgtgtgtatga
DBGET
integrated database retrieval system
