Colossoma macropomum (tambaqui): 118814576
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Entry
118814576 CDS
T09004
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118814576 (srek1)
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
118814576 (srek1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_3
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
118814576
NCBI-ProteinID:
XP_036436139
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All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSGMPGTAVIQITNLSSSVSSEQMRTLFGFLGDIEELRLYPPDNTPLSFSSKVCYIKYRE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPATPVASLMPGGGLLPIPS
PAPLQNLGLPLAGRGTMSAGLDSSVAALSVIPSQPPIMGNVDPSKIDEIRRTVYVGNLNS
QTTTAEQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFANQESVARALAFNGVMFGDRPL
KINHSNNAIVKPPELTPQAAAKELEDVMKRVREAQSTIAAAIEPAESKKRSSSRSKRSRR
SRSRSRSHSHSRSRSCLRRKCSRSRHRGKTSQRSRQRTSDSQSLHKRHSRSKEKRHSRSR
SRSRDRRKDKDGKTKRGDNSEDRRRDKKGRTPPKGYGRSPRSHSTSRGHRRRSRTHSRSP
KRKARSSSPKRGKKERKRERVWDSSREWRERSTSRRRSSRDSDRQEHKAKTTKAGKQYEE
RDYESEVDGSDSAASEYLSPQAHHNGSYSSTHGEEEFSTTE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaatgccaggcactgctgtaattcagatcaccaacctgtcctcgtctgttagt
agtgaacaaatgcgaactctcttcggtttcctcggagatatcgaagagttgcgactatac
ccccctgacaatacgccgctttccttctcatctaaagtttgttacataaaatacagagag
ccgagcagtgttggcgtggcacagcatttaaccaacactgtgtttattgacagagctctt
attgttgtgccatgtgcagaaggaaagatccctgaggaagccaaggctctgtcccttctg
gcacctgccaccccggtcgccagcttgatgccaggtgggggactgctgcccatcccaagc
cctgccccacttcagaatcttggtctgccactggctggccgggggacgatgtcagctggt
ctggactcctcagtggcagcactaagcgtaatcccctcccagcctcccatcatgggcaac
gtggacccctccaaaattgatgagatccggaggactgtatatgtcggcaatcttaattct
cagaccaccacagcagagcagctgctggagttttttaagcaggttggtgaagtgaagttt
gtgcgaatggcgggagatgagacacaacccacccgctttgcatttgtagagtttgccaac
caagagtctgtggcaagagcgctcgccttcaatggagtcatgtttggagacagaccctta
aagatcaaccattccaacaatgccatagtgaagcctccagagctgacaccacaggctgca
gctaaagagctggaagatgtgatgaagagagtgagagaggctcagtccaccattgcagca
gccatcgaaccagcagagagcaagaaacgctcatccagtagatccaagcgctccagaagg
tcccggtccagatctcgctcacattctcactcacgttcccgttcctgcttgcgacggaaa
tgctcccgatctagacacagaggaaagacgtcgcagaggtcacggcaaagaacgagcgac
tcgcagagtttacacaagagacactcgcgatccaaagagaagagacacagccgttcacga
tcgcgctccagggacagacggaaagataaggatgggaagacaaagagaggagataacagc
gaagaccggagaagagacaaaaaaggcaggacgcctcccaaaggctatggccggtccccc
cgatcccacagcactagcagaggtcacagaaggagaagcagaacacactccagatcccca
aaaagaaaagcaaggtcttcttcaccaaagagagggaagaaagagaggaagagagagcgt
gtgtgggacagcagcagggagtggagggagaggtcaacgtccaggaggaggagcagcaga
gactcagacagacaggagcacaaagccaagaccaccaaggctggaaaacagtatgaggag
agggattatgagagtgaagttgacggttctgactcagctgccagtgaatacctgtctccc
caggcccatcacaatggcagctacagcagcacacatggagaggaggaattctccacaact
gagtga
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