KEGG   Colossoma macropomum (tambaqui): 118814690
Entry
118814690         CDS       T09004                                 
Name
(RefSeq) tripartite motif-containing protein 35-like
  KO
K12012  tripartite motif-containing protein 35
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118814690
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    118814690
SSDB
Motif
Pfam: PRY SPRY zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-C3HC4_4 zf-C3HC4_2 zf-RING_5 U-box zf-RING_2 zf-RING_10 zf-RING_6 DUF4200 Prok-RING_4 Sina_RING Exonuc_VII_L Med21 ORC3_N Mitovir_RNA_pol zf-Nse
Other DBs
NCBI-GeneID: 118814690
NCBI-ProteinID: XP_036436315
LinkDB
Position
Unknown
AA seq 462 aa
MPFKGVSEKHISCPVCCEIFRDPVLLGCSHSVCKSCLEKFWEIKGSKECPVCKRKSSKDH
PPLNLTLKNLCEAFAQEESPKASEKDETLCGLHSKELTFFCLDDQQPLCSDCSKIHTNHR
FCALQEKAVNFKTELNAALKSLKEKQKIFQDCKQNWDETAEHIKTQAQDTERQIKEEFEK
LHQFLRDEEAARIAALREEEQQKSQIMTEKIEKMSREIEVLSDTIRAVEEQMRAKDVSLI
RNYKVTLERAQCKLQDPEKPSVELLHVAKHLSNVKYKAWHKMENIVKFSPVTLDPNTAHA
ILVLSDELTTVRLLDERQQIPDNPERFDYLRFVLGSVGFNSGTHCWDVEVGDSKFWGLGV
ITESANRKGNVDSRRGMWGMLLYNSTYAAGASPNPAPLPIQHKVQRITVQLDWNKGKLSF
TDSLTNKCLRTVKHRFTETVFPFFYADEADSVLRILPTRSNV
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcctttcaaaggtgtctcagagaagcacatctcctgtcctgtgtgctgtgaaatcttc
agggatcctgttcttctgggctgtagtcacagtgtgtgtaaatcctgtctggagaagttc
tgggagatcaaaggatccaaagaatgtccagtttgcaagaggaagtcttcaaaggatcat
cctccactaaatttgactctgaagaacctgtgtgaggcttttgcacaggaggaaagtcca
aaagcttcagaaaaggatgagacactttgcggtttacacagtaaggaactcacattcttc
tgtctggacgatcaacagcctctgtgttcagactgttctaagatacacaccaaccacaga
ttctgtgcccttcaggagaaagcagttaacttcaagactgaacttaatgctgcactgaag
tccctaaaggagaaacaaaagatctttcaagattgtaaacagaactgggacgagactgca
gaacatataaagactcaggcccaggacacagagaggcagattaaggaggagtttgagaag
ctccaccagtttctacgagatgaagaggcagccaggatagcagctctgagggaggaagag
cagcagaagagtcagataatgacggagaagattgagaagatgagcagagagatagaagta
ctttcagacacaatcagagccgtagaagaacagatgagagctaaagacgtctcactcata
agaaactacaaggtcacactggaaagagcccagtgcaaactgcaggatccagagaagcct
tcagtagagctgcttcatgtggcaaaacacctgagcaacgtaaagtacaaagcctggcac
aagatggagaacattgttaagttctctcctgtaactctggacccaaacaccgctcatgct
atactcgtcctgtctgatgaactgaccactgtaagacttcttgatgagagacagcagatt
cctgataatccagaaagatttgattatctgcgttttgttctgggatcggtgggctttaac
tcagggacgcactgctgggatgttgaagtgggagacagtaaattctggggtctgggtgtg
atcacagagtctgctaataggaaaggaaatgtagactccaggagaggaatgtgggggatg
ctgttgtataatagtacatatgcagcaggtgcttcaccaaaccctgctcccctgccaata
caacacaaagtccagaggatcacagtgcagctggactggaacaaaggaaaactgtcattc
actgattctctcactaacaaatgcttacgcacagtaaaacacagattcaccgagacagtc
tttccatttttctatgctgatgaagccgactctgttctgaggattttaccaactcggtcc
aatgtctaa

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