KEGG   Colossoma macropomum (tambaqui): 118814699
Entry
118814699         CDS       T09004                                 
Name
(RefSeq) tripartite motif-containing protein 35-like
  KO
K12012  tripartite motif-containing protein 35
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118814699
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    118814699
SSDB
Motif
Pfam: PRY SPRY zf-B_box zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-C3HC4_2 zf-RING_2 zf-RING_10 U-box zf-Nse Sina_RING PEHE Prok-RING_4 zf-RING_6 ATG17_like DUF4200 AAA_11 Gp-FAR-1
Other DBs
NCBI-GeneID: 118814699
NCBI-ProteinID: XP_036436324
LinkDB
Position
Unknown
AA seq 461 aa
MASRTLLAKDLSCPVCCKLFRDPVLLRCGHSVCKSCLQKFCNTKGSNECPVCKGKSSLDP
TLNLALKNVCETFLQAESQRASGKAEPLCSLHSTELRLFCLDDDQPVCLLCRDSKMHANH
RFRTLKEVAHDYKDKVSAALKSLKEKQMIFKESKLNWDQVAKHIKTQSQDTERQIKEEFE
KLHQFLRDEEAARIAALREEEQQKSQMMKEKIEKMSREIEALSDTIRAVEEEMGAEDVSF
VQNYKVTVERAQRKLQDPESLSGKLLNVAKHLTNLKFTVLEKMQAIVESSPVTLDPNTAH
PKLILSDELTTVRLGSEKQQLPGSPERFDYQHFVLGSVGFNSGTHCWDVEVGDSKFWGLG
VIEESANRKGNVDSRRGMWGMLLYNSVYSVSSSPQKPTPLPVKHKVQRITVQLDWNKGKL
SFTDSLTKTHLHTIKHKFTENVFPFVYVGDVDSYMKILPVC
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggcttccagaactttattggcaaaggatctctcctgtcctgtctgctgtaaactcttc
agggatcctgttctcctgcgatgtggtcacagtgtgtgtaaatcctgtctgcagaagttt
tgcaacaccaaaggatccaacgaatgtccagtttgcaagggaaagtcttcactggaccct
acattaaacctggctttaaaaaatgtgtgcgagactttcttacaggcggaaagtcagaga
gcttcaggaaaggctgaaccactctgcagtctacacagcacggaactcagactcttctgt
ctggacgatgatcagcctgtgtgtttgctatgtcgggattctaaaatgcatgccaaccac
aggttccgtacccttaaggaggtggctcatgactacaaggataaagtcagtgctgcactg
aagtccctaaaggagaaacagatgatctttaaagaaagtaaactgaactgggatcaggtt
gccaaacatataaagactcagtcccaggacacagagaggcagattaaggaggagtttgag
aagctccaccagtttctacgagatgaagaggcagccaggatagcagctctgagggaggaa
gagcagcagaagagtcagatgatgaaggagaagattgagaagatgagcagagagatagaa
gcactttcagatacaatcagagccgtagaagaggagatgggagctgaagacgtctcattc
gtacaaaactacaaggtaacagtggaacgagcccagcgcaaactccaggatccagagagc
ctttcaggaaaattgctcaatgtagcaaaacacctgaccaacctgaagttcacagtcttg
gagaagatgcaggcaattgttgagtcttctcctgtaactctggaccccaacactgctcat
cctaaactcatcctctctgatgaactgaccactgtgaggctcggtagtgagaaacagcag
cttccaggtagtccagagagatttgattatcagcattttgtcctgggatcggtgggcttt
aactcagggacgcactgctgggatgttgaagttggagacagtaaattctggggtctgggt
gtgattgaagagtctgctaacaggaaaggaaacgtagactccaggagaggaatgtggggg
atgctgttgtataacagtgtatattcagtaagttcttcaccacaaaaacccactcccctc
ccagtaaaacacaaagtccagaggatcacagtgcagctggactggaacaaaggaaaactg
tcattcactgattctctcactaaaacacacttacacactataaaacacaaattcactgag
aacgtatttccatttgtctatgttggtgatgttgactcttatatgaagattttacctgtt
tgctag

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