Colossoma macropomum (tambaqui): 118814781
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Entry
118814781 CDS
T09004
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118814781 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118814781 (trpv1)
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118814781 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_4
Ank_3
PKD_channel
Claudin_2
Motif
Other DBs
NCBI-GeneID:
118814781
NCBI-ProteinID:
XP_036436440
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MSRPFYLEADDGTDEERAKAKAARKAYGKGCPERARGPMDTDFLEDHGEIACQVRFNLNF
DKKIRGIKEDPSQKEKERFDIKRLFEAVSSGDVSKLEGLHEYLCKTSKKLTDTSYRPSGK
TALLKALLNLKNGENETVEYLLDIAEKMDHLEELVNAAYTDCYYRGQTALHVAIERRSKR
FAELLIQKGANVHAKACGSFFQPRDGTCFYFGELPLSLAACTNQKEMVDLLMNNNADARQ
RDSQGNTVLHALVMVADNSPENTDFVTSMYDYILIKAHMNPKQKKLEDFENNQGFTPIKL
AAKTGKIGLFEHILHREFQQEQCRHLSRKFTEWAYGPVYASLYDLASVDTYDNNSVLEIV
VYSTEMPNRLEMLQIEPLNNLLEDKWNRFAHRIFLFNFICYLIYLGIFTAICCHHKDDED
LFPLKTTKGYLYLAAGLFVLAASIYFFIKGLMDMKRKPPRLRTLLIDGYSDLLFFFQAVC
FLLCVGLYVSKKKEYLAFLVVCLALSWINLLYFSRGSQHMGIYSVMIQRMILGDILRFLF
VYFVFLIGFSAAVMTLLYETPNQNNQTAPGRGRSLFKDSSEDCTKPTFKNIYFTTLELFK
FTIGMGDLEFTEQYQYKHVFYVLLISYIVLTYILLLNMLIAMMSKRVEKMSEETTNIWKL
QRAITTLDLERSLGRCLRTKLRSGVDKDLGKKEKDVRRCLRVEEVNWNKWNRNLGIISED
PGDFIRSPPAPRPQRGQSWRGFLRDFSRRTPNTLAPPEEQEMRPLTSV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacccttctatttggaggcagatgacggcacagatgaggagagggcaaaggcc
aaagcggcgaggaaggcatatgggaagggctgtccagagagggccagggggccaatggac
acggacttcctagaggaccatggggagatcgcctgccaagtcagatttaatttgaacttc
gataaaaaaatacgagggataaaagaagacccatcccagaaggaaaaggagaggttcgac
atcaagaggctgtttgaggctgtgtccagcggtgatgtatctaagctagaaggcctgcat
gagtacctgtgcaagacgagcaaaaaactaacagacacctcatatcgacccagtggtaag
accgctctgctgaaggctctgttaaacctgaaaaatggagagaatgaaacagtggagtac
ttgctggacattgctgagaaaatggaccatctggaggagttagtgaatgcagcatataca
gactgctactacagagggcagacagctctacatgtagccattgagaggaggagtaagcgt
tttgctgagttactcattcagaaaggggctaacgtccatgcaaaggcctgtgggagcttc
tttcagcctcgtgacggaacatgtttttactttggggagcttcctctgtctttggctgcc
tgtaccaatcagaaggagatggtggacctgctgatgaacaacaatgcagacgcgaggcag
agagattctcagggcaacactgtgcttcatgccctcgtgatggtggccgataacagccct
gagaacacagactttgtcacctccatgtatgactacatccttatcaaagctcacatgaat
ccaaaacagaagaagctggaggactttgaaaacaatcaggggttcactcccatcaagctc
gctgcaaagacaggaaagattgggctgtttgaacacatcctgcatcgtgagttccagcag
gaacagtgcaggcacctgtcccgaaagttcacagaatgggcgtacggtcctgtttatgcc
tccctctacgacctggcctccgtcgacacctacgacaacaactctgtcctggagatagtc
gtatacagcacagagatgcctaatcgtcttgagatgctccagattgaacctctcaataac
ctgctggaagacaaatggaacagatttgcacatcggatattcttatttaattttatctgt
tatctcatatacctcggcatcttcacagccatttgttgtcaccataaagatgatgaggac
ctttttccattgaagaccaccaaaggctacctgtaccttgcagctgggctctttgtactt
gctgcatcgatatatttcttcattaaagggctgatggacatgaagagaaaacctccaaga
ctgcgaacactgctgatagatggttattctgacctgctctttttctttcaggcagtgtgc
ttcctgctctgtgtggggctgtatgtgtctaagaagaaggagtatctggcttttctggtt
gtctgtctggccctgagctggatcaatcttctctacttctccagaggatcccagcacatg
ggcatctacagcgttatgatccagaggatgatccttggtgacatcctgcgcttcctcttt
gtctactttgtctttctcattgggttttcagcagctgtgatgacgctgctttatgagacg
ccaaaccagaacaaccagacagcccctggccgcgggcgctcgttattcaaagactcgtca
gaagactgcacaaagcccaccttcaaaaacatctatttcaccactctggagctgtttaag
ttcaccatcggcatgggagatctggagttcaccgagcagtatcagtacaagcatgtgttt
tatgtgctgcttatttcatatatagtactcacatacatcctgctgctgaacatgctgatc
gccatgatgagcaagagggtggagaagatgtccgaggagaccaccaacatctggaaactg
cagcgtgccatcaccaccttagatctggagagaagtcttggtcggtgcctgagaacaaaa
ctgcgctcaggagtggataaagacctgggcaagaaagagaaggacgtgcggcggtgcctc
agagtggaagaagtcaactggaacaaatggaaccgcaaccttggcatcatcagcgaggat
cctggagacttcataagatccccaccagctcccagacctcagagagggcagagctggcgt
gggttcttgcgggacttcagccgacggacgcccaacaccctcgcccctccggaagagcag
gagatgagacctctgacgtcggtttaa
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