KEGG   Colossoma macropomum (tambaqui): 118815036
Entry
118815036         CDS       T09004                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmao03019]
    118815036 (zc3h12b)
Messenger RNA biogenesis [BR:cmao03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118815036 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C UBA_N4BP1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 118815036
NCBI-ProteinID: XP_036436860
LinkDB
Position
Unknown
AA seq 782 aa
MATKPHRQLCRSPCLDRPSFSQSSTLQELRMSSESRDYQTKMEFALKLGYSGEQVESVLS
KLGPSALINDVLAELVRLGNKGELEAQAPVSSAGLAPRGPGAKEAVSPEASLEEETTDTY
DNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAP
ITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVSNDNYRDLQNE
KPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGKKC
TYGHKCKYYHPERAAQPMRSVADELRAFAKLSAVKTMSEGALAKCGTSGTAAKGDGSEAK
RVAPKRQSDPSIRSVACEQEERLCPARKAEANSVPSLVTALSVPTMPPTKSHAAGALNTR
SASSPVPGSLHFTHSSLEHTSSVQYPPILVTNSQGASVAYSEPFPKYDSVVSDHGYYSML
SDFSTISLGSMQDSFCSLEQPDPTGIGGGYPERASSMCPEPGRSHSSDSFSSYGGEMYSM
EGSLDDSMKGPQAQVQSSAQTRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQSSAHLVP
HAQHPVVGARSSCPGDYPPLSQNVMPSSGPTQQGRSLGMTRMDSISDSRLYESNPLRQRR
PPLCREQHASWDPLPCGNEPYGYGGYGLTGGLMPCCERVMVRSMPEKMEQIWRSPWDTPP
GPPPAVEPQERHPIPEQQYQTYRNLCNIFPAYVVHSVMEKNPHMTDPQQLAAVIVTKLRS
CH
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggccacgaaaccgcaccgccaactctgccgatcgccgtgcttggaccgtcccagtttc
agccagagcagcaccctacaggagctacggatgagcagtgaaagcagagactaccaaacc
aaaatggagtttgcgctaaagctaggctattccggagagcaagtggagtccgtcttgagc
aaactaggtcccagcgctctaatcaacgatgtcctggccgaactcgtccgtctcggaaac
aaaggggagctggaggcccaggcgccagtcagttcggctggtttagcacctcgaggtccc
ggggccaaggaggcggtcagtccagaggcttcacttgaagaggagacgacagacacgtac
gataacctccgacccatcgttatagacggatccaacgtagccatgagccatggaaacaaa
gaggttttctcgtgcctgggcatccagctggcggttgattggttcctggagaaaggacac
aaagacatcaccgtgtttgtaccagcatggaggaaagagcagtccagaccagacgcccct
ataacagatcaggagatcctgaggaagctggagaaagagaagatcctggtcttcaccccg
tctcgtcgtgtccagggccgacgggtcgtttgttacgatgaccgcttcattgtcaagctg
gcctatgattctgacggcatcatcgtctccaatgacaactaccgggacctgcagaacgag
aaaccggagtggaagaagttcatcgaggaacggctcctcatgtacagcttcgtcaatgac
aaatttatgccccctgatgacccactaggcagacatggtccaagcttggagaatttcctg
cggaagcgacccgtggtaccggaacacaagaagcaaccgtgtccttacggtaagaagtgc
acatacggtcacaagtgtaagtactaccacccggagagagccgctcagcccatgcgctct
gtagcagatgaactcagagctttcgccaaactatctgctgtgaaaaccatgagcgagggt
gctcttgctaagtgtggcacctccggcaccgctgccaagggggacggttcggaggccaaa
cgagtggcgccaaagcggcaatcggacccgagtatccgctcggtggcatgcgagcaggaa
gagcgactctgtccagctaggaaagccgaagcaaattccgtcccatccttagtgacggca
ctaagtgtccccaccatgccgcccacaaaaagtcatgcggccggtgccctgaacactcgg
tcagctagtagccctgtgccagggtcactgcacttcacccacagctctctagaacacacc
agcagtgtccagtatccccctattcttgtcacgaacagccagggggcatctgtggcatac
agtgaacctttccctaagtacgattctgtggtcagtgatcacggctactactcaatgctc
agtgatttttccaccatcagcttgggtagtatgcaggacagcttctgtagcctggagcag
ccagatccgacagggatagggggagggtatcctgaacgagcctccagcatgtgtcccgaa
cctggacggagccattcttcggactctttctcttcctacggtggagagatgtactccatg
gagggcagtctggatgacagcatgaaaggcccacaagcccaagtgcagtcatctgcgcag
actcgcttgcaagcatttgcgcatggtttccaccacgaggccttgacaagggtccaaagt
tatggcacagacgaacccaaaccaggtccacgcaagcagtcctcagctcaccttgtgccc
catgcgcagcatcctgttgtaggagcccgatccagctgtccgggcgactaccccccactt
tcccagaacgtgatgccttcgtctggtccgacacagcaagggagatccttgggaatgacc
cgcatggacagcatctcggactcccgtctatatgagagtaatcccctgaggcagcgccga
ccgcctttgtgccgggagcagcatgcaagctgggatccattgccttgtgggaatgaacct
tacgggtacggcggttacggactgacgggaggactcatgccgtgctgcgagcgcgtcatg
gtccgtagtatgccggaaaagatggagcagatttggaggtctccctgggataccccacca
ggcccacctccagcagtggaacctcaagaacgacacccaatcccggagcagcagtaccaa
acttaccgcaacctctgcaatatctttccagcatacgtagtccactcagtcatggagaag
aatcctcacatgaccgatcctcagcaactagcggcagtcatcgtgacaaaactgcggtcc
tgtcattga

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