Colossoma macropomum (tambaqui): 118815255
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Entry
118815255 CDS
T09004
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03320
PPAR signaling pathway
cmao04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118815255 (rxrgb)
03320 PPAR signaling pathway
118815255 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118815255 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmao03310
]
118815255 (rxrgb)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118815255 (rxrgb)
Nuclear receptors [BR:
cmao03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
118815255 (rxrgb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
118815255
NCBI-ProteinID:
XP_036437144
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MDNNDAYLHLNSSGVLNSSPSQPPPMGSMMGHPSVISSSRPLPSDMGPLGSPINGLASPY
SVITSSMGSPSVSLPSTPGMGFSTLNSPQMNSLSSVSSSEDVKPPPGLPPLGNMNSYQCT
SPGSMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECLIDKRQRN
RCQYCRYQKCLAMGMKREAVQEERQRGKEKSDNEVESTSSFNEEMPVEKILDAELAVEPK
TETQTDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNEL
LIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELG
CLRAIVLFNPDAKGLSNPSEVERLREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSI
GLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggataataatgacgcgtatttacacctcaattcgtctggggtgctaaattcatccccc
tctcagcctccaccaatgggctccatgatgggccacccgtcggtgatcagctcctcacgg
cccctcccctcagacatgggcccactgggctctccaatcaatggcctggcctcgccctac
tcggtcatcacctcctccatgggctctccatccgtctcgctgccctccacacccggcatg
ggcttcagcaccctcaacagcccgcagatgaactctctgagcagtgtgagcagctcagag
gatgttaaaccccctcctggtctgccgccgcttggcaacatgaacagctaccagtgcacc
agccctggatccatgtccaaacacatctgcgccatctgcggagaccgctcctcaggaaaa
cactacggcgtgtacagctgtgaaggctgtaaaggcttcttcaagaggaccatccggaaa
gacctgacctacacgtgtcgagacagcaaggagtgcctgatcgacaagcggcagcgcaac
cgctgccagtactgccgctaccagaagtgcctggctatgggcatgaagagggaagcggtt
caggaagagaggcagcgtgggaaggagaagagcgataacgaggtggagtcgacgagcagt
ttcaatgaagaaatgccggtggagaagatccttgatgcggagctcgcagtggaacccaaa
accgaaacacagacagacggcagtcccggaaactctacgaacgacccggtcactaatatc
tgccaggctgcagacaagcagctcttcacactggtcgaatgggcaaaaaggataccgcac
ttctctgaactgcccctggacgatcaggtcattctgctgcgggcaggctggaacgagctg
cttatcgcttcgttctcacaccgctctgtcacggtgaaggatggcatcctgctagccact
ggcctccacgtgcaccgcagcagcgcccacagtgcgggggtgggctctattttcgacagg
gtgctgactgagctggtgtctaagatgaaggacatgcagatggataagacagagctgggc
tgcctgagagccatcgtcctgttcaaccccgacgccaaaggcctctctaatccatctgag
gtggagcggctcagggagaaggtctacgcctctctggagtcctacaccaagcagaaatac
cccgaccaacctggcaggtttgctaagctcttactgcgcctccccgcgctgcgctccatc
ggtctgaagtgtctggagcacctcttcttcttcaagctgatcggagacacgcccatagac
accttcctcatggagatgctggaagcgccccaccagatcacatga
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