Colossoma macropomum (tambaqui): 118815278
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Entry
118815278 CDS
T09004
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118815278 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118815278 (tprb)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118815278 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
118815278
NCBI-ProteinID:
XP_036437173
LinkDB
All DBs
Position
Unknown
AA seq
2344 aa
AA seq
DB search
MAAVLQQILERTELSKLPKAVQTKLEKYFADQQSEIDDLKARHEQFRVDSEQQYFDLEKR
CTDSQDQFLSLTKERHKLKDELDKLDEELKCLREKTKDQESSYAKLELEQRQISKAKDEL
EAEKRELVRTLERRSQEVESQSDDLKRLNDRLVEVNAAKMQLQLKLDELEASEVSIKYKE
KRMEQEKELLQGQVTWLNDELKAKSEELLSLSRQKGSEILDLKCSLNDKEDEVARLQDQV
ASLKASNENLQKQTEDLISKLKEAKEQQASLEEKFRNELNANIKLSNLYKGAADDAEAKS
EELNRAVEELHKLLKEAGEAHKALEVKMTEMEGEKQQEIAELKDQISSLEKELDNANELL
SDTKHRVGTTSASVLTEEPLTTMSPTAAAVTKIKPGMKLTEIYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKAPLLKRQREEFERMQKSVASLSAKLEQAVQEVQRLQRETDEAN
KRSSVLERDNQRFEVQLADMAQQVRVLLVELEEARGNHVLRDEDDVSSADVSSTSEVISQ
HLVTFRSVEELQQQNQRLLVALRELGEAQEKEEMEGESTKHSELQKSLEKAQSELEQLRE
QRAHQMQLAESIVRQRDMYRILLAQVTGVSFPQQGTIPEEFSRTSTPRRSPAVTPTTATP
TGLVATAMEAAETVEAKAALKQLQEVFGAYKKEKAESEKALGEQCEKLQDQVSELRSQNS
KISTQLEFASKRYEMLQDNVEGYRKEIASLREKTQKQATAVQKSEQTGHTLTQDLRAANE
KLAMADSQVESLRKERDMLKVVESRLTQEKESILSQQRSQNLLLTNLKSIQATLERSETE
TRQRLTAQVEKQEREISQLQKRLEHEVEQRHLLARNQDMQLLDAKKQLEAQTALYQRTRE
QLSTAQQELNTLRQQVSSEEGRLASPATHTGLTGPQGGEGDVEELRTRLKQAESKAEDLT
ERVKSATASVEQYRAMCLSLEEALEKEKQVTEQVRASVESQVKEAQEQHRQLERKLLEAE
KEKQEIQEEKQKAVAAVEQQVSELRRSLNSLQAEHQDALQKVSVAAAQEQQALLDAQEQA
RLATEAQDKYEREMMLHAADVEALQAAKAQALRATQLRQQLEENAQRASAQLLEARVSWE
EQERILKEEQTKVEARCEDLQKQNELLHEQIQSMSGKMATQLQQQQAASESSLNVSLTEE
GKSQEQLLEILRFVRREKEIAESRFEVAQGETLRHRLRVEHLERELKEVQDSLSAERERM
QVTAKTLAQHDELMKKTETMNVLVETNKMLRAEKERVEQELQQAQAKIRKLESDILPMQE
SNAELSEKSGMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQ
QLTEETSRLKAEAARSSGSVTTLQSQVHNLRENLGKVTVERDNLKKDLEAKTHDIQEKAK
TITQVKKIGRRYKTQYEELKVQHDKMVAAAASTPAQDQEAQQASAQELQNLRESLSQSET
RTRELEGQVETLNRTVGEREAEVRNAQEQASRLQAELTRMRQELQEKSALEEQLRQQLAE
KEERTRKAFMGAKQKINQLVDVKGQLVKENEELKQQREELEVRVNALRSQYEGRLSRQEK
ELRDLREQQERHGEQRDEPPEQGSSKTQEQQRTTEQRQISLKPTPATERGSASTSEPPTA
NIKPTPLVATPSKPPAIPGNKPTPRASIKPMITPAPVPTPTPTATVMPTTQLESQEALQS
SDTSLEHVPVYSSTSPNVQTTLAQPMHSFQQSQTTAFVQPTQQQSLPPAEPASQEPAAPP
APVMMEAAPSTSQMERPSTSTAVFGAVSATPGSALSKRPREEEQESMTVDTEPQEEPTEP
PISKKLRMQRVGLEEEMLAEDSTEAESVVPGDSQEAPDASEELELNYPTLERGAEFGLSQ
EIMFSQEPEAAHSQDEPDEPVIVIVSDSESEEEQEEETDEEEQDYQEEEEEEDDDDDEGG
MGEEGEESNEGSGSGDPNEAYEGDDTEGPDATDPGTETEESLGALDSQAYNLVASLSGDF
FTEQPISSSAPRPPQTTRGLLHPLPHRLNILAPPAQELGPPAQVQRIPVRRQTTARSLQL
TSGVAGSAQPQQHFYEEEDRMVPSTPTLMVHRSDCFSETVNSPQVAGVPRFGFGLPDDVP
QTSSTHSDMGLLAAQGGLGIYDSPLFLPTHEEESGGRSVPTTPLQVAAPVTAFSETSSEV
TEHASQSVPMVSTSTPGLTAAAGPSTSEERDDLLLEAGGDGSSAEAALEPASQTEAEEPA
QPSDDASLPSTSQEPSSSSADTSSSQPPKARTASGRQWTRARPHGGFVKRDGLGVMGVRG
RFAR
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgctgcagcaaatcctggaacggactgagctctccaaacttcccaaagcc
gtgcagactaaactggaaaagtattttgccgaccagcaaagtgagatcgatgacctgaaa
gcccgccatgagcagttccgagtggacagcgaacagcaatactttgacctggagaagagg
tgcactgacagccaagaccagtttctgtcgctgacaaaagaacgtcataaactgaaggat
gaactggataagctcgatgaagagctcaaatgtctgcgtgagaagaccaaggatcaagaa
tcctcctatgcgaagctggaattggagcagcgtcaaatctccaaagctaaagatgagctg
gaggcagagaagcgagagcttgtgcggacgctggagaggagatcccaggaggtggagagc
cagagtgacgacttgaaacgacttaacgaccgactagtggaagttaatgcagcaaagatg
cagctgcagctgaagctagacgagctggaggcctcggaagtctcgataaagtacaaggag
aagcgaatggagcaggaaaaagagctcctgcagggtcaagtgacctggctaaatgatgag
ctgaaggctaaaagcgaggagcttctctccctctcccgacagaaaggcagcgagatcctg
gatctcaagtgcagcctgaatgacaaggaagacgaggttgccagactccaagaccaagtg
gccagtctgaaggcctccaatgagaaccttcagaagcaaacagaggacttgatcagcaaa
ctgaaagaggccaaagaacagcaagccagtttggaggagaagttcaggaatgagctgaat
gcgaacatcaagctatcaaacttatacaagggagcagcagatgatgccgaggccaagagt
gaggagctgaaccgagctgtggaggagctgcacaagctgctgaaagaggcaggagaggcc
cacaaagctctggaggtgaagatgaccgagatggaaggtgagaagcagcaggagattgct
gagctcaaagaccaaatcagcagcctggagaaagagctggacaacgccaacgaacttctg
tcagacacaaagcaccgagttggtaccacatctgcttcagttcttacggaggagccgctg
accaccatgtctcccaccgcggcagccgtgaccaagatcaagccaggcatgaagctcact
gagatctacaccgcgtatgtcgagtcccaggagcagctgcagctggagaggctggagaac
aagcgtgtgaacaagtacttggatgacatcgtgcaagaggtggaggccaaggcacccctc
ctgaagaggcagcgggaggaatttgagcgcatgcagaagtcggtggccagtctgtccgcc
aaactggagcaagccgtgcaagaagtgcagcgcttacagagggaaacggatgaggccaac
aaacggtcatctgtgctggagagggacaaccagaggtttgaggtgcagttggctgacatg
gctcagcaggtgcgggtgctgctggtagagctggaggaggcgcgcgggaaccatgtgttg
cgtgacgaagatgatgtgagctcagcagatgtgagcagcacttcagaggtgatatcccag
cacctggttaccttccgcagcgtagaggagctgcagcagcagaaccagcgcctcctggtg
gccctccgagagcttggtgaagcgcaggagaaagaagaaatggagggcgagagcaccaaa
cacagtgagctccagaagagtctggagaaggcccagagtgaactggagcagctgagagag
cagcgtgctcaccagatgcagctggcagagtccattgtgcgccagcgagacatgtaccgc
attctgctagcccaggtcaccggggtcagcttccctcagcaaggaaccattccagaggag
ttctcccgcacctccaccccccgccgctcccctgcagtcacacccactactgctacaccc
actggactcgttgccactgcaatggaggctgcagagacagtggaggccaaggctgccctg
aagcagctgcaggaagtgttcggggcctacaagaaggagaaggctgagagtgagaaggct
ctgggtgaacagtgtgagaagcttcaagaccaagtgtccgagctgcgctcccagaactca
aagatctccactcagctggagtttgcctccaaacggtatgagatgctgcaggataatgtg
gagggttaccgtaaagaaattgcctctctgcgggagaagacccagaaacaggccacagct
gtccagaagagtgaacaaacgggtcacaccctcacacaagacctgcgtgcagctaatgag
aaacttgccatggctgattcccaagtggagagtctgcgcaaggagagggacatgctgaaa
gtggtggagtccaggctgacccaggagaaagagtccatcctctcgcagcagcgcagccag
aaccttctgctcaccaacctcaaatcaattcaggccactctggagcgttcagagactgag
accaggcagcggctgacggcgcaggtggagaagcaggagcgggagatcagccagctgcag
aagagactggagcatgaggtggagcagagacacctgctggcgcgcaaccaggatatgcag
ctgctggatgctaagaagcagcttgaggcccagactgctctgtaccagaggacccgagag
cagctgagcactgcccagcaggagctaaacactctccggcagcaagtgagcagcgaagag
ggtcgactggcctcgcccgccacacatactggcctcacaggacctcaaggtggtgaaggg
gacgtggaagagctgcgtactcgtctgaagcaggctgagagtaaagcagaggatctgact
gagagggtgaagagcgctaccgcctccgtcgaacagtacagagctatgtgcctcagcttg
gaggaggcgctggagaaagagaaacaggtgaccgaacaagtcagggcttcggttgagagc
caggtgaaggaggctcaggagcagcaccggcagctggaaaggaagcttctagaagctgaa
aaggagaagcaagaaatccaggaagagaaacagaaagctgtggcagctgttgagcagcag
gtgagtgagctgcggagaagtctgaacagcttgcaagcagagcatcaggatgccctgcag
aaggtgtcggtggcagcggctcaagagcagcaggccctgctggacgctcaggagcaggca
cgactggccactgaggcccaggataagtatgagcgggagatgatgctgcacgccgctgat
gtggaggctctgcaggcagccaaagcgcaggcactgagagccacccagctccgccagcag
ctggaggaaaacgcccagagggccagtgcacagctgctggaggcccgcgtttcctgggag
gaacaggagaggatccttaaggaggagcagactaaggtggaggcacgctgtgaagacctg
cagaagcagaatgagctcctccatgagcaaattcagagcatgagtggtaagatggccact
cagctgcagcagcagcaggcagccagcgagagctccttgaatgtgtctttgaccgaggag
ggcaagtcgcaagagcagctcctcgagatcctcaggtttgtgcgccgggagaaggagata
gcagagtcacgttttgaggtagctcagggcgagactttgaggcacagactgcgagtggaa
cacctggagcgggagctgaaagaggtacaggactcactcagtgctgagcgggagagaatg
caggtgactgctaagactttggcccaacacgatgagctcatgaagaagaccgaaaccatg
aacgtactagtagagaccaacaagatgctacgggctgagaaggagagggtggagcaagag
ctccagcaagctcaagccaagattcgcaagctggagtcggacatcttgcccatgcaggag
tccaatgcagagctgagtgagaagagcggcatgctgcaggctgagaagaaacttcttgaa
gaagacatcaaacgctggaaggcccgaactcagcacctggtgagccagcagaaggacaca
gacccagaagagtacaagcgattgcactcagaaaaagaggcacatctcaaacgtatccag
cagctgacagaggagaccagccggctaaaagctgaagctgccaggagtagcggatcagtc
accacgctgcagtctcaggttcataacctgcgggaaaaccttggcaaggtgacggtggag
agagacaacctgaagaaagacctggaagccaagacacatgatatacaggagaaggccaag
accatcacacaggtcaagaagattggtcgtcgatacaaaacccagtatgaggagctcaaa
gttcagcatgacaagatggtggcagctgcggcctcgactccagctcaagaccaagaggct
cagcaggcctcggcacaggagctgcagaacctgcgagagtccctgagtcagtcagagacc
aggaccagagagctggagggccaagtagaaacccttaacaggacggtaggggaacgtgag
gcagaggtacgcaacgctcaggagcaagcctcccgcttgcaggctgagctgacacgaatg
cgtcaggagctgcaggaaaaatcggctctggaggagcagctcaggcagcagctggccgag
aaggaggagaggaccaggaaggctttcatgggagccaagcagaagatcaaccagctcgta
gacgtgaagggtcaactggtgaaggagaacgaggagctgaagcagcagcgtgaagagctg
gaggtgcgtgtaaatgctctgcgctcccagtatgagggtcgcttgagccggcaggagaag
gagcttcgggaccttcgtgagcagcaggagaggcacggagagcagagagacgagcctcca
gagcagggatccagcaagactcaggagcagcagaggactacagaacagaggcagatctct
ctgaagcccacaccagcgactgaaaggggaagtgcaagcacctctgagcctcctaccgct
aatataaagcccactccgctggtggcgacccccagcaagcctccagccattcctgggaac
aagcccactccaagagcaagcatcaagccaatgatcactcctgcccctgtgcccactccg
actcctactgccacagtcatgcccaccacccagctggagagccaggaagccctgcagtca
tcggacacttcattggagcatgtgccagtatacagtagcaccagccccaacgtgcagacc
acactggcccagcccatgcacagcttccagcagagccagaccaccgcctttgtccagcct
acgcagcaacagagcctgccccccgctgagccggctagtcaggagccagctgctcctcca
gctccagtgatgatggaggctgcacccagcacctcgcagatggagaggccttccacatct
acagctgtatttggagcagtatcagccactcctggcagcgctttaagcaagcggcctcgg
gaggaagagcaggagagcatgactgtggacaccgagccccaggaggagcctaccgagcct
cccatatccaagaagctccgcatgcagagagtggggctggaggaggagatgcttgctgag
gacagcactgaggctgaaagtgttgtgccaggagacagccaagaagcccctgatgccagt
gaggagctggagctaaactaccccaccctggagaggggggctgaattcgggttgtctcag
gagataatgttctctcaggagcccgaggctgcacacagccaggatgagcctgacgagcca
gtcattgttattgtcagtgattcagaaagtgaagaggagcaagaggaggagacggatgaa
gaggagcaggattaccaagaagaggaggaggaagaggatgatgacgatgatgaaggagga
atgggagaggaaggagaggagagcaacgaggggagcggcagtggagatcctaatgaggcc
tatgaaggagacgacacggagggtcctgatgccacagaccccggcactgagacagaggag
agtcttggcgcattggactctcaggcttacaacttggttgccagcctgtctggggacttc
ttcactgagcagccaatcagcagctctgctccccgccctccacagacaacacggggactt
ctgcatccactgcctcatcggctcaacatcctggccccgcccgcacaggagctgggtcca
cctgctcaagtccagcgcatccctgtcaggcggcagacaactgcacgtagccttcagctt
acttctggagtggccggtagtgcacagccgcaacagcacttctatgaagaggaagaccgc
atggtccccagcaccccgactctgatggttcatcggtcagactgcttcagtgagacagtc
aattctccacaggtagccggagtgccacgttttgggttcggcctcccggacgacgtcccg
cagacgagctccacgcactcggacatgggcctgctggccgcacaaggagggctgggcatc
tacgacagccccctgttcctgcctactcatgaggaggagtcaggtggacgcagcgtcccc
accacacctctccaagtggccgctcctgtgacagcgttttcggagacatcctcggaggtg
actgaacacgcctcccagtctgtgcccatggtcagcacgtccacaccgggcctgacagct
gcagccggccccagcacctccgaagaacgtgatgacctcctactggaagctggaggagac
gggagcagtgctgaggcagcgttggagcctgcgtctcagacagaggcagaggagccggcc
cagccttcagacgacgccagtcttccctctaccagccaggagccctcttccagctctgca
gacacgagcagcagtcaacctcccaaagccaggactgcatctggaaggcagtggactcga
gcacggccccacggaggcttcgttaagagagatggattaggagttatgggagttcgaggg
cgctttgccagatga
DBGET
integrated database retrieval system