Colossoma macropomum (tambaqui): 118815384
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Entry
118815384 CDS
T09004
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04010
MAPK signaling pathway
cmao04020
Calcium signaling pathway
cmao04144
Endocytosis
cmao04510
Focal adhesion
cmao04540
Gap junction
cmao04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118815384 (pdgfra)
04020 Calcium signaling pathway
118815384 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118815384 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118815384 (pdgfra)
04540 Gap junction
118815384 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118815384 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmao01001
]
118815384 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cmao04090
]
118815384 (pdgfra)
Enzymes [BR:
cmao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118815384 (pdgfra)
Protein kinases [BR:
cmao01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
118815384 (pdgfra)
CD molecules [BR:
cmao04090
]
Proteins
118815384 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Kinase-like
Motif
Other DBs
NCBI-GeneID:
118815384
NCBI-ProteinID:
XP_036437365
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MGTVKTHLLLGVVLVGILADAWRVVGGLPPPTIVSDQTQFLLELHSVFNISCTGKQSVFW
EEPLPKNTHVLPGYYTATLLIEDAAAFHTGPYLCVYEEEESDPASIYIFVPDPEVPFVPE
EPYTHHAEAWQSLIPCRVTDPESSVLLRTQPSGHEIQAFYEPSHGFNGLFSPGLYVCETV
VNGETVQSAVYSVADESGMKFSVELRVSQQEVKEGGAFNLTCETPPGAKFVQQWLHTSKQ
AVGAVQMKQTFPDKVLYILSIPHASVADSGYYECSVTEQFGGQTKSSSVTVTVHATSFVV
LDHSGIGAVESAALLEETEFTIYIISDTTPKVTWFKDDLVVDGIFVTTKTTLLEDKRYES
VLVLRHPQEDDSGTYKIVASAGSQSAEFSFKINVKAAEPQLLQSILAPVIWPRKEVLVVS
LHSTFKLTCRGLAELAWSCPVFNNEPTLEDKRAVFVSTVTINNATAIHTGDYTCYYQDGN
YTEEANIYVYVPDPKVPFVPSLVPFINHMLTSHEETEVPCRVSDPSANVTLIHLETQQPV
PAAYDSKRGFLGFFTAGTYVCRALVNGEEHESEEYIVHGWAGPELQIELKAEKKALLVGE
TLTVNCVAKGSEMLEDRWKYPGSHAGRGVKTVKENKRDQEIQYTLTVSRATAKDSGIYSC
TITDIISNESQTKELTITVYEREFVSVSPAFDSMETAKLDDVREFRVDIDALPTPKVTWL
KDGVVLGDVSAEIATSLRTISETRYQSTLTLIRAKAEDSGNYTVRAEIGNQSASHSFSLQ
VKVPAVIVDLMDLHHGSAAGQAAVCVAGGSPVPDVEWYICKNIKHCANDSTQWSPLQTNT
TGIKVDTHINQDNQLESEVIFGHLENTLAIRCLARNDMAAVSREVKLVSSGPHSELTVAA
AVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRWEFP
RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMT
HLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHPEKAKKDLDIFG
INPADESSRSYVILSFEEKGDYMDMKQADTMQYVPMLERSEASKYSHLQRDDYDHPPSHT
HTNESEVEKLLSDDTEGLTTMDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLSQGKIV
KICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTSLSDVWSYGILLWEIFSLG
GTPYPGMVVDSSFYNKIKSGYRMAKPEHASNDVYELMVKCWNNEPEKRPSFHSLSESVTT
LLPSGYKRSYERVNNNFLKSDHPAVTRMQCVHVSDDAYLGVAYKNQGKLRERESGFDEQR
LSSDSGYIIPLPDLDPLSDEEYIKRNRHSSQTSEESAIETGSSSSTLPKREGETLEDVTL
LDEMCLDSGDLVEDSFL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtgaagacacatctccttctgggggttgtcttagtaggcatattggcagat
gcgtggagggtcgtgggtggtcttcctccaccgaccatcgtttctgatcaaactcagttc
ttgttagagctgcactcggtcttcaatattagctgtacggggaagcagagcgtgttttgg
gaagagccgttaccgaagaacacgcacgtgctgccgggatactacacggcaacgctgctg
atagaggacgccgcggctttccacaccggaccttacctatgtgtctatgaggaagaggag
agcgaccccgccagcatctacatctttgtaccagatcctgaggttccattcgtgccagag
gagccttacactcatcatgctgaagcctggcagtccctcattccgtgtcgtgttacggac
ccagagtccagcgtgcttctccggacccagccgagtggacacgagatccaggccttttat
gagcccagtcatggtttcaatggcctcttttctcctggactgtatgtgtgtgagactgtt
gtgaatggcgagacagtccagagtgcagtgtactcggtggcagatgagtctggtatgaag
ttcagtgtggaactgagagtcagtcagcaggaagtaaaagaaggaggcgctttcaacctc
acctgcgagaccccacctggggctaagtttgtccagcagtggctgcacaccagcaaacag
gctgtaggtgctgtccagatgaagcagacgtttccagacaaggttttgtacatcctcagt
atcccgcatgcctcggtagctgactctggctactacgagtgctctgtcactgagcagttc
ggtggccagaccaagtcctccagtgtgaccgtcactgtccatgcgacttctttcgtggtt
ctggatcacagtgggattggagcagtggaaagtgccgctctcttggaggagacagagttc
accatctatattatatctgacactacgccaaaggttacgtggttcaaagatgatcttgtg
gttgacggcatctttgtgaccactaagaccactcttttagaagacaaaaggtacgagagt
gttttggtcttgcggcatcctcaagaagatgacagcggcacatacaaaatcgtagcatca
gctggatcacagagcgccgagttctccttcaagattaatgtcaaagctgctgaaccacag
ttgctgcagtccatactggctccagttatctggcccaggaaggaagttctggtggtgtcc
cttcactccacgttcaaactgacgtgtcgcggtctggcagagctggcctggagctgcccc
gtcttcaacaacgaaccaacgcttgaagataagagggctgtctttgtctccacggtgacc
ataaacaatgctacagcaatacatacgggggattacacctgctactaccaggacggaaat
tatactgaagaggccaacatctatgtttatgtgccagacccaaaagtgccatttgtgccc
tctctggtgccgttcattaaccatatgctgacgagtcatgaggagaccgaggtcccgtgc
cgcgtgtctgaccccagtgctaatgtgactctgatccatttggagacccagcagcctgta
cctgctgcctatgacagcaagaggggctttctgggcttcttcactgctggaacatacgtg
tgccgagccctggtgaacggtgaggagcacgagagtgaggagtacatcgtccatggctgg
gcaggcccagagttgcaaattgagctgaaggctgagaaaaaggctctcttggtcggagag
accctcacagtgaactgcgtggcaaaaggcagcgagatgctggaagaccgctggaaatat
cctggcagtcatgctggtcgtggagtgaagacagtaaaggagaataagagggatcaggag
attcagtatactctgactgtgtctagagccacagctaaagacagtggaatctactcctgc
actataactgacattatcagcaatgagagccagactaaagagctcaccattactgtctac
gagagggagtttgtgtctgtgtctcctgcgtttgactccatggagacggccaagctggac
gacgttcgtgagttcagggtggacatcgatgctctccccacccccaaggtcacgtggctg
aaggacggagtcgtcctgggcgacgtttctgccgagattgccacctccctccgtacgatc
agtgaaaccaggtaccagagcactctcactctgattagagctaaggccgaagacagcggc
aactacacagtgagagctgagataggcaaccagagtgccagccattccttcagcctgcag
gttaaagttcctgcagtgatcgtggaccttatggacctccaccatggctcagcagcaggc
caggctgcagtgtgtgtcgctggagggtctcctgtccctgatgtggagtggtacatctgt
aaaaacatcaaacactgtgctaatgactcaactcagtggtcaccacttcagaccaacacc
acagggatcaaagtggatacacacatcaaccaggacaaccagctggagagtgaggtgatc
ttcggccatctggagaacacgctggccatccgttgcctggcccgcaatgacatggctgct
gtctcccgggaggtcaaactagtgtccagcggtccgcactcggagctcactgtggcggct
gccgttctggtgctgttggtcattgtcatcatctcactcattgtgctggtcattatctgg
aaacagaagccacgctatgaaatcagatggcgggtcatagagtcagtgagtccagatgga
cacgagtacatctatgtggaccccatgcagctgccctacgactcgcgctgggagttccca
cgtgacggcctcgttctgggccgtatcctgggttcgggcgcctttggtaaggtggtggag
ggcaccgcatatggactaagtcgctctcaaccggtcatgaaggtggcggtgaagatgctc
aaaccgacagcacgctccagtgagaagcaagcgctgatgtcagagctgaagatcatgacc
cacctgggccctcacctcaacatcgtcaatctgctgggagcatgcaccaaatcaggtcct
atctacataatcactgagtactgtttctatggagacctagtgaactatctgcataagaac
agagatggctttttgagccggcacccagaaaaggccaagaaagacctggacatctttggc
ataaacccagctgatgagagcagtcggagttacgtgatcctgtccttcgaggagaaagga
gactacatggatatgaagcaggcagacactatgcagtatgtccccatgctggagaggagc
gaagcctccaaatactctcacctgcagagagatgattacgatcaccccccctcacacaca
cacaccaacgagagtgaggtggagaaacttctgtccgatgacacagaggggctgaccacg
atggatcttcttagcttcacctatcaagtggccagagggatggagtttctagcctccaaa
aattgcgtgcacagagatctggcagcacgtaatgtcctgctgtcccagggtaagattgtg
aagatctgtgacttcggactggccagagacatcatgcacgacaacaactatgtgtccaaa
ggaagcactttcctgccagtgaaatggatggcccctgagagcatcttcgataacctgtac
acctctttgagtgacgtgtggtcgtatggaatcttactgtgggagatcttctctctggga
ggtactccttatcctggcatggttgtggactccagcttctataacaagatcaagagtggc
tacaggatggctaaaccagagcacgcctccaacgatgtatatgagctgatggtgaagtgc
tggaacaatgagccagagaagagaccctccttccacagcctgagtgagagtgtgaccacc
ctgctgccttctggatacaagaggagctacgagcgcgtgaacaacaacttcctgaagagc
gaccacccagcagtgacgcgcatgcagtgtgtacatgtgagtgatgatgcttacctgggc
gtggcctataagaaccaaggcaagctgagggagcgtgaaagcggctttgatgagcagagg
ctgagctcggacagcggctacatcatccccctgcctgacctcgacccactttccgacgag
gagtacatcaaacggaaccgtcacagctcccagacgtctgaggagagcgctatagagacg
ggttcgagcagctccacattgccaaagcgggagggagagactctggaggacgtcacgctg
ctggatgagatgtgcctggactcaggagacctggtggaggacagtttcctgtga
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integrated database retrieval system
