Colossoma macropomum (tambaqui): 118815526
Help
Entry
118815526 CDS
T09004
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04137
Mitophagy - animal
cmao04140
Autophagy - animal
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118815526 (hif1ab)
04137 Mitophagy - animal
118815526 (hif1ab)
04148 Efferocytosis
118815526 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118815526 (hif1ab)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118815526 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Rbsn
Motif
Other DBs
NCBI-GeneID:
118815526
NCBI-ProteinID:
XP_036437590
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARCRRGKESEVFYELARQLPLPHNVSSHLDKASIMR
LTISYLRMRKLLSSDEAEDESELESQLNGFYLKALEGFLMVLSEDGDMVYLSENVCKCMG
LTQFDLTGHSVFDFAHPCDHEEMREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCTGHVRVQECSEGPGDTSFKEPPITYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGHEPDDLMNRSVYEFYHALDSDHLTKTHHNLFAKGQATT
GQYRMLAKKGGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTVTEPK
AVEKEPEMEKEEDSEMDMSKLFKNEKLLCSVKSSESLYEKLKEEPEALTVLAPAAGDTII
SLDFNSPDSEIHLLKEVPLYNDVMLPSTSEKLPLPLSPLAPSEPPPALTKLESGGEDFSF
SSTSHHSTDTADKPSSPTTGSSSSEPNSPMDYSLEVDSAISSEFKLDLVEKLFAIDTEAK
TPFSTEDMGDLDLEMLAPYIPMDDDFQLHITSPLDPLPSGPHAISDMNSLFQPLPTPPSP
PSSSSSSVKQEPCSRVPSPLHLLQEVRSAPVSPFSGARSREASPARAPTPQGGIPLTSRM
SVVDRELSPKVLAIQNAQRKRKLEEVTSLSQAVGLGALLQSVDDVIEPGKRAKVLEVKGS
SLLGGNKTILILPSDVASRLLCSSFDSSGGLPQLTRYDCEVNAPIQDRHPLLQGEELLRA
LDQVN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagtcgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgctgctcgatgtcgcaggggcaaggagtctgaggtgttctatgaactagca
cgtcaactgccccttccccacaatgtcagctcccatctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgcatgagaaaacttctgagctctgatgaggcagaggatgaa
tctgagctggagagccagctcaatggcttctacctgaaggccctggagggcttcctgatg
gtgctttctgaggatggagacatggtttatctctccgaaaatgtctgcaagtgcatgggc
ctcacacagtttgatctgactggccacagcgtttttgactttgctcacccttgtgatcat
gaggaaatgagggagatgctagtgcacagaacagggtccaagaaaactaaggagcaaaac
acagagcgaagcttcttcctgcgcatgaagtgcacactcactagtcgaggacgtactgtc
aacatcaagtctgccacatggaaggttctccactgcacagggcatgtgcgtgtccaggag
tgcagtgagggtcctggagatactagcttcaaagagccccctatcacctatctggtgctt
atttgtgagcccatccctcacccctcgaacatcgaggtgcctctggacagcaaaaccttc
cttagccgtcacactctggacatgaagttctcatactgcgatgagagaatcacagaactg
atgggccatgagccagatgacctgatgaataggtctgtgtatgagttctaccatgccctg
gactctgatcacctcaccaagacacaccataatctgtttgcaaagggccaggctacaaca
ggccagtatcgaatgctggctaagaagggaggctatgtgtgggtcgagacccaggccaca
gtcatttacaatcccaagaactcccagccgcagtgcattgtgtgtgtcaactatgttctc
agtggcattgtggagggagacgtagtcctctccctacagcagacagtgacagagccaaag
gctgtggagaaggagccagaaatggagaaggaagaggactcggaaatggacatgtcaaaa
ctgttcaagaacgagaagctgttgtgttctgtgaagagctcggagagcctgtacgagaag
ctgaaggaggagcctgaggccctcacagttctagctcccgctgcaggagacaccatcatc
tcactggactttaacagtcctgactctgagattcatctactgaaggaggtgccactctac
aacgatgtcatgctgccctccaccagtgagaaactgcctctgccgctgtctccgctggct
cccagtgagccccctccagctctgaccaaactagagtctggaggagaggacttttcgttt
tcttccacctcccatcacagcacagacactgccgacaagccatccagccccaccactgga
tctagctcctcagagcccaacagcccaatggattactctttagaagttgattcagctatt
agctcagagttcaaactggatttggttgaaaagttgtttgctattgacacagaggcaaag
actccattcagcaccgaagatatgggtgatcttgacctagaaatgcttgcgccatatatt
cctatggatgatgacttccagctacacatcacttctcctctggacccgctcccctctggt
ccacatgctatctcagacatgaactccctgttccagcccttacctaccccgccatctcca
ccttctagctccagcagttcagtaaagcaggagccctgttctcgtgtcccttcaccactc
cacctgctacaggaggtacgcagtgccccagtctcacccttcagtggcgctcgcagtcgt
gaggcttccccagcccgtgcccccaccccacagggaggcatccctctgactagcagaatg
tcagtggtggatcgagagctctctccaaaggtgctagcaatccagaatgcccagcgaaag
agaaaactagaggaggttacctcactgtcacaagcagttggactgggtgctttgcttcaa
tctgtggatgatgttatagaaccaggaaagagagcaaaagtgcttgaggttaaaggttcc
agtttgcttggtgggaacaagaccattcttatactgccatctgatgtggccagtcgtttg
ctgtgcagctcatttgacagcagtggagggttacctcaactgacgcgctatgactgcgag
gtcaacgctcctattcaggaccgccatcccttgctacagggggaggagctactgcgtgct
ctggaccaagttaactga
DBGET
integrated database retrieval system
