Colossoma macropomum (tambaqui): 118815528
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Entry
118815528 CDS
T09004
Symbol
six4b
Name
(RefSeq) homeobox protein SIX4b
KO
K15615
homeobox protein SIX4
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118815528 (six4b)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
118815528 (six4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
118815528
NCBI-ProteinID:
XP_036437592
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All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MASSSSAELISAEEIKRESPRTTLDELAPLPPSVEESAPPSCVASPLAFSPEQVACVCEA
LLQGGDVERLARFLWSLPQSELLRGNESILKAQAIVAFHQARYQELYCILESHSFSPANH
SSLQDMWYKARYSEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALK
DMYKRNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSEAQSKSESDGNHSTEDE
SSKAQEDLSPRPLSSGSTGSTTHGSSPAVVYADGTTTVIQQIGDVKMSPLSAGMGFNGDL
ASANSHYLNGGAYVQSHGNSSVLNGLGATGGHFLTFDPHRVSHAQERLLGGSYASYSMEA
PENTVGKLEGMQTLVSHSEDGAPPSVVTFATPPSSSSATSGAPHLSSYSMVSLSGVENNL
GLPPLLLPPSSTAPSHGSTPLDGVVSDSSQHSGQPLLYTLNQVVKQEPLDIGVGYTYPSG
MPLDQTGNLGYTASLFLSSNLGPSPDNSSPLAPAVTAAVTSVLSSTEGHTTLTHATRGLQ
EGGSTLSSDYTTQDAQLPLSNNLEAPAGHGEGPVCGDMDMEGKELAKLQTVQMDADSDL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcctcctccgccgagctcattagcgccgaggagatcaagagggagagccca
aggacgacgctggacgagctcgcgccgctcccgccgagcgtggaggagagcgcgcccccg
tcctgcgtggcatcgccgctcgccttctcccccgagcaggtggcgtgcgtatgtgaggcg
ctgctgcagggcggcgacgtggagcggctcgcgcgcttcctctggtcgctgccgcagagc
gagctgctgcgcggcaacgagagcatcctgaaggcgcaggccatcgtcgctttccaccag
gcgcgctaccaggagctctactgcatcctggagagccacagcttcagcccggccaaccac
tcgtcgctgcaggacatgtggtacaaggcgcgctacagcgaggcggagaaggcgcgcggc
aggccgctgggcgccgtggacaagtaccgcctgcgcaggaagtacccactgcccaggacc
atctgggacggcgaggagaccgtgtactgcttcaaggagaagtcgcgcaacgcgctcaag
gacatgtacaagaggaaccgctacccgtcgccggccgagaagaggaacctggccaaaatc
acggggctctccctgacccaggtcagcaactggttcaaaaacaggaggcaaagggaccgg
aacccctccgaggcacagtcgaaaagtgaatcagatggaaatcacagcacagaagatgag
tcgagtaaggctcaggaggacctgtctcctcgtcccctctccagcggctccacaggctca
accacccatgggtctagccctgctgtagtttacgctgacggtaccaccactgtcatccag
caaatcggggatgtcaaaatgtctccgctttcggcaggaatgggcttcaatggtgacttg
gcaagcgccaactctcactatctcaatggtggagcctatgttcagtcacatggcaacagc
agcgtcctgaacggacttggcgccacaggtggccacttcttgacctttgatccccacagg
gtctcccatgcccaagaaaggctactgggtggctcctatgcctcttattcaatggaggcc
ccagaaaacacagttggaaaactagagggcatgcaaactctggtttcccattcagaagat
ggagcaccaccttcagtagtaaccttcgccacccccccttcttcatcctccgctacctct
ggagcccctcatcttagcagctatagtatggtcagcctctctggggttgagaacaatctg
ggtcttcctcctttattgctacccccatcatctacagcaccctctcatggctctactcct
ctggatggcgtggtcagcgactcatcccaacactcgggccagcccctgctctacacgctt
aaccaggtagtcaagcaagagccgctggacattggcgtgggctacacatatccttccggc
atgcccttagatcaaactggcaacctgggctacactgcctctctctttctgtcctccaac
ctcggcccctcacccgacaacagcagcccccttgcccctgcagtcacagctgccgtcacc
tccgtcctgtccagcacagagggtcacaccactctgacacatgctacccgtggactccag
gagggcgggagcactctgtcctcagactacacgactcaagatgctcagctgcctctgtcc
aacaacctggaggctcctgcagggcatggagaggggccagtgtgcggggatatggacatg
gagggcaaagagctggccaagctgcagactgtgcagatggatgcggacagtgacctctga
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