Colossoma macropomum (tambaqui): 118815575
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Entry
118815575 CDS
T09004
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
118815575 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118815575 (lrfn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
LRR_1
ig
Ig_2
LRR_9
V-set
Sp38
fn3
C2-set_2
LRR_Zer-1
Ig_5
Motif
Other DBs
NCBI-GeneID:
118815575
NCBI-ProteinID:
XP_036437684
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
METLFVYLVVIIMAVKAQKIQICPKRCICQVLSPNLATLCDKKGLLFVPPNIDRHTVELR
LGDNFITNIKRRDFANMTKLVDLTLSRNTIGSVAPHAFNDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTYIHIGAFNDLLALEELDLSYNNLESVPWVAIQRMINLHTLS
LDHNMIDYIPEGTFSGLLKLKRLDVTSNKLQKLPPDPVFQRAGVLVTSGIFGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLSGRYFWTVSEEEFLCEPPLITRHSQETR
ALEGQHVTLRCKARGDPDPVIHWIAPDGRLVSNSSRTVVHSDGTLDILISTVKDSGSFTC
VASNPSGEAQQTVELLITKLPHFTNDTSLVQEPDPGSSDIATSTRMGGDGSPAIANTKAG
QEKRVLISEITSSSALVKFSLQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKTILVNNL
AAGTLYDLCVLAIYDDAITTLTATRVVGCVHFSTEPQYLRCHFMQSQFLGGTIVVIIGGV
IVASVLSFIIFLIVRYRVCNQEGVDKGVELGDMHSQSRSEQLQGCGIIKSMSKQVLGSER
DSCRKVSPQMEAAPSPAPAAAPPPVPRPPPKPSLPDCTVTTSAASHSWHPASPNTRRPAH
TTTPKPGMPHKQDAQVSMELDNSNKNNSTKTRPKSAQIRAYSTMVTPASRRAQLESLHNY
MTVPVGCARVSRRHSLNVDSCKQPSYMTYQQQTGSLRSKRSLSMSGGDLPQLDTSGRLHG
KDSLSRSEWVLESTL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactctatttgtttacttggtggtcattatcatggcagtaaaagcccagaagatc
caaatatgtcccaaacgttgcatttgtcaggtgctgtctcctaacctggccacattatgt
gataaaaaggggctgctttttgtgcccccgaacattgacagacacaccgttgaactgcgg
ctaggtgacaattttataacaaacatcaaacggagggactttgccaacatgaccaagctt
gtagacctaactctctccaggaacaccattggctctgttgcaccccatgctttcaacgac
ctggagaacctgcgtgccctgcacttggacagtaatcgtcttacacgcatcacgaacgac
acttttagcggcatgtctaagctccaccatctcattctgaacaacaaccagctcacttac
atccacataggagcctttaatgacctcttggcccttgaagagcttgacctctcctacaac
aatctcgagagtgttccatgggtggccatccagcgcatgatcaacctccacactttaagc
ctggaccataacatgattgattatattccagaggggacgttttcaggacttttgaagctc
aagcggctagatgtcacctccaacaagctacagaagcttccacctgatccagtcttccaa
cgagcaggtgttttggtcacctcgggcatttttggcccaacgtcctttgcgctgagtttc
ggagggaacccactgcgctgtaattgcgagttgctgtggttgaggagattgcggcgcgag
gatgacctggaaacttgcgcagctccccagcacctttctggacgctacttctggaccgtg
tctgaggaggagttcctgtgtgagcctcccctcattacacgtcattcacaagagaccagg
gcactggagggccagcacgttaccctgcgctgcaaagctcgtggtgatccagatcctgtc
attcactggattgcccctgatggtaggctagtgtccaactcaagcaggacagtggtccac
agtgatgggacgctagatatcctaatcagcaccgtgaaggattcaggttcgttcacctgt
gtggcatccaacccatctggagaggctcagcagactgttgagttgcttattaccaaacta
ccacatttcacaaatgacacaagcctggtacaggagcctgaccctggctcctcagacatt
gctacgtccaccaggatgggtggagatggcagccctgctattgcaaacaccaaagctgga
caagaaaagcgggtgctgatctctgaaatcacatcctcctcggccctggtgaagttcagc
cttcagcggaatatcccagggattcggatgttccaaatccagtacaatggaacctatgat
gactctctggtgtacagaatgatccctccaaccagtaaaaccatcctggtcaacaactta
gcagccgggacattgtatgacctctgcgtgctagcaatttatgatgacgcaatcaccact
ctcacggctacgcgggtggtggggtgtgttcacttctccacggagccccagtaccttcgt
tgccacttcatgcagtcccagttcctcggaggcacgatcgtcgtcatcatcgggggtgtc
atcgtggcctctgtcttgtctttcatcattttcctcatcgtgcgctaccgggtttgcaac
caggagggagtggacaagggagtggagctgggagacatgcactctcagtccaggagtgag
cagttgcaaggctgtgggatcatcaagtccatgtccaagcaggttctgggctcagagagg
gactcctgccgaaaggtatcgccccaaatggaggcagctccttctccagcaccagccgca
gctccccctcctgtgcctcggccgccacccaaacccagccttcctgactgcactgtgact
acctctgccgccagccatagctggcatcctgcctcgcccaacacccgacgaccagcgcac
accaccaccccaaaacccggcatgccgcataagcaggacgcacaggtcagcatggagctt
gacaacagcaacaaaaacaactcgaccaagacccgtcctaaatccgcccaaatccgggcc
tactccaccatggtgaccccggcttccaggagagcacagctagaatccttgcacaactac
atgactgttccggtggggtgcgcgagagtgagccgcaggcactctctgaatgtagactcc
tgtaaacagccgagttacatgacttaccagcagcagaccggcagcctgcggtccaaacgc
agcctgtccatgagtggcggagatctgccccagctggacacttcaggcagactccacggg
aaggactctctgtccaggtcagagtgggttctagaaagcacactataa
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