Colossoma macropomum (tambaqui): 118815589
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Entry
118815589 CDS
T09004
Symbol
prpf39
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118815589 (prpf39)
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118815589 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_MalT
TPR_16
TPR_11
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
118815589
NCBI-ProteinID:
XP_036437708
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MEHSDLDLSDEPMTGMVDTNTPDNGDSTAMEGAGDGFISYLPNLTQDAQWTMDQVPDTLA
DLANQQNLDQDHVQQAAAVEQFSVDGNSKSVEQKSGISEDSATEQPENSAHDVGSQLETT
EQTADSPDLKKLSSQKQAESGNSESPANMELEDASKEGSEDGSGDVSVQKPSLPSEFERL
YKVVEDNPEDFNGWVYLLQYVEQENHLLASRKAFDAFFLRYPYCYGYWKKYADIEKKHGC
IQMADEVYRRGLQAIPLSVDLWLHYIAFLRENQDTSDGEAENRIRAAYEHAVLAAGTDFR
SDRLWEAYINWETEQEKLANVTAVYDRILAIPTQLYSQHFQRFKDHVQNNNPKHFLSEEE
FVQLRLELAAANKPTGDGEEETPSEELPPGTEDLPDPAKRVTEIENMRHKVIEARQEIFN
HNEHEVSKRWAFEEGIKRPYFHVKALEKTQLSNWREYLDFELENGTPERVVVLFERCLIA
CALYEEFWIKYAKYLESYSTEGVRHVYKKACTIHLPKKPTIHLLWAAFEEQQGNIEEARG
ILKSLEEAVPGLAMVRLRRVSLERRHGNLDEAEALLRDAMKNGKNATESSFYSVKLARQL
LKVHRSVGKARKVLLEAIEKDETNPKLYLNLLELEYSGDVQQNETEILACFDRALNSPMP
LDSRVTFXQRKVEFLEDFGSDINTLVTAYDHHQALLKEQESTKRKAENGSQEPDSKRQRM
DDGSAASGQMVPDMQANHGAYNYNNWYQQYNSWGTQNSWGQYSQYQYNQYYPPPPT
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggaacattctgacttggatctctcagacgaaccaatgacaggaatggttgatacgaat
acccccgacaatggggactctactgctatggaaggagcaggagatggtttcatttcttac
cttcctaatttaacccaagatgctcagtggacaatggaccaagtacctgatacacttgct
gaccttgcaaaccaacagaacttagaccaagaccatgtgcaacaggctgctgcagttgag
cagttctcagtggatgggaattcaaaatcagtggagcagaagtctggtatttctgaagac
agtgccacagaacagcccgaaaactctgcacatgatgttggaagtcaattagaaacgact
gaacagacagcagatagccctgatttgaaaaaactgagctcgcaaaagcaggctgagtca
ggcaattcagaaagtcctgccaatatggagcttgaggatgcctccaaagagggaagtgag
gatggatcaggtgatgtgtctgtgcaaaagccttcccttccttctgaatttgagaggctt
tataaagtagttgaggataaccctgaagattttaatggatgggtctatcttctgcagtat
gtggaacaagagaaccacctgttggcttcaagaaaggcatttgatgcctttttcctacgc
tatccatactgttatggttactggaagaaatatgcagatattgagaagaagcatggttgc
atacagatggcggatgaggtataccgtagaggtttgcaggccatcccactaagtgttgac
ctgtggcttcattatatagcttttctaagggagaaccaggacaccagtgatggagaagct
gaaaaccgcatacgagctgcttatgagcatgcagtccttgctgcgggtaccgacttccgg
tcagaccgtctgtgggaagcttatattaactgggaaactgaacaagaaaagctggccaat
gttacagctgtctatgaccgtatcctggctattcctactcagctgtactcccagcacttt
cagaggttcaaagatcatgtgcaaaacaataatcccaagcacttcctgtctgaagaggag
tttgttcagctgaggttggagcttgctgctgccaataagcccactggcgatggagaggaa
gaaacccccagtgaggagcttccaccaggcaccgaagaccttcctgaccctgcaaagaga
gtgacagagattgagaacatgcggcacaaggtgattgaggcacgccaagagatcttcaac
cacaatgagcatgaagtcagcaagcgttgggcctttgaggaagggatcaagcgtccatat
ttccacgtaaaagccttggagaagacacagctcagcaactggagggagtacctggacttt
gaactggagaatgggacaccagagcgcgtagtggttctgtttgagcgctgcctgattgcc
tgtgccctttacgaggagttttggataaagtatgccaagtacttagagagctacagcaca
gagggagtgagacatgtgtacaagaaagcatgcaccatccacctacccaagaaacctaca
atccatcttctgtgggcagcttttgaggagcaacaggggaacattgaggaggcacgagga
atcctgaaaagtctagaggaggcagttccaggcttggccatggtgagactacgtcgggtg
agcctagagcgtcgacatgggaacttggatgaagctgaggcactactgcgggatgccatg
aagaatggaaaaaatgcaaccgaatcatctttctactctgtgaaactagctagacagctc
ctcaaagtgcacagaagcgttggcaaggctagaaaagtactgctagaggccatcgaaaaa
gatgagaccaatcctaagctgtacttgaacctgctagagctagagtacagtggggatgtg
cagcagaatgaaacagagatcctggcatgctttgatcgagctctcaacagcccaatgcct
ttggattcacgtgtgacttttnctcaacggaaagtggagtttcttgaggactttggcagt
gacataaacacgcttgtgactgcatatgatcatcatcaggcacttctgaaagaacaagaa
tcaacaaagagaaaagcagagaatgggtctcaagaaccagattcaaagagacagcgtatg
gatgatggctcagcagcgtcaggccagatggtgccagacatgcaggccaaccatggagca
tacaactataacaactggtatcagcaatacaactcatggggaactcaaaactcctggggc
cagtacagccagtatcagtataaccagtactaccccccaccccccacatga
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integrated database retrieval system
