Colossoma macropomum (tambaqui): 118815683
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Entry
118815683 CDS
T09004
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04140
Autophagy - animal
cmao04148
Efferocytosis
cmao05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118815683 (vps18)
04148 Efferocytosis
118815683 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118815683 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118815683 (vps18)
Membrane trafficking [BR:
cmao04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118815683 (vps18)
Hops complex
118815683 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
DUF1664
zf-rbx1
DUF2229
DUF2175
DUF5600
KNOX2
DUF4446
zf-ANAPC11
Apolipoprotein
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
118815683
NCBI-ProteinID:
XP_036437867
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MASILDEYEDSQIIRHPVHPSRMAAANMIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEK
INHFAVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVHKLFLDPTGSHLVISL
TTNECVYLNRNTQKVRSLSRWRGHLIESVGWNKVLGSETNTGPILVGTSQGIIFEAEISA
SEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGIESKCFIIATTRKRLFQFVGKLA
EGSEQQGFSSIFAQNQELLPSFQEFPVNMGYSEIAFYTSKLRSCPKSFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDFSFNKPISIVLTQFHFLLLLPDRVKAICTLNGQVVYE
DVFPDKFGALKKMIKDPVGGLVWIYTEKAVFRYHIQRESRDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQKYFEEIALKFIEAKQEEALKEFLLKK
LGNLKPNEKTQITLLVTWLTELYLNRLGQLEAGDPKNPLFMDTRDEFRHFLCNPKHREFF
YNNRSTIYDLLASHGNVDDMVYFSVIMQDYERVISHHCQHDDYSAALEVLSKHCDEKLFY
KFSPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALVNYSQVGSAQQINETIRYMEFCVYEL
GVKEEAIHNYLLSLYAKYKPDSLLLYLEQAGTHASEINYDLKYALRLCAEHGYHQACVLI
YKIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNC
LSSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIRED
IQEMRNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLTTYKLNKLE
ELQKKLAATTQTTKSRHRPKEEDTVSLGKGQGSREQIKSDIDDIIASECAYCGELMIKSI
DKAFIDPQKFDEEMSSWL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattcttgacgaatacgaagactcgcaaatcattcgtcaccctgtccacccg
tcccgtatggcggcggccaacatgattgggatcactcactcagggtttgtgaatgtgcgg
ctggaggaagaaaagcccatatttaacaagcaacggatcgatttctcacctcctgaaaag
ataaatcactttgcagtatgcaacaaccagttatgcatgagtcttgggaaggacaccctc
ttgaggattgatctcggaaaaccagatcagccgaaccagattgaactaggaaggaaagac
gacagtaaagtacacaaattgtttctggacccaacagggtctcacttggtgattagtctg
accacaaacgagtgtgtctacttgaacagaaacacccaaaaggtccgcagtctttctcgg
tggaggggccaccttatagagagtgtgggctggaacaaggtcctgggttctgagactaat
actggcccaattcttgttggaaccagccaaggcatcatctttgaagcagagatctctgct
tcagaaggtagtctgttcaacactaaccctgaccaatacttcagacaggttcattcctta
gaggaagatggcaaaccagcaccagtctgttgccttgaggtggaacgcgggatagaatca
aagtgcttcatcattgcaaccactcgcaaacgtctcttccagttcgtaggcaagttggca
gaaggttctgagcaacaagggttcagctccatctttgctcagaatcaggaactccttcct
agctttcaggagtttcctgttaatatgggctacagtgagattgctttttacacctcaaag
cttcgatcgtgccccaagtcctttgcctggatgatgggcaatggggttttgtatggccag
ttggactatgtgcggcccgactctctcctcagtgatgtacaggtgtgggaatacacacca
gacattgacttcagcttcaacaagcctatctccattgtactcacgcagttccacttcctt
ctcctgcttcctgaccgtgttaaggctatttgtactttgaatgggcaagtagtctatgaa
gacgtgttcccagataagtttggcgcgctcaaaaaaatgatcaaagatcctgtaggtggg
ctggtatggatctacacagagaaagctgtttttcgctatcatatacagagggaatcaaga
gatgtctggcagatgtacatgagcatgaacaagtttgatctggccaaagagtactgcagg
gatcgaccagagtgcatggatatggtgttggccaaggaggcagagcactgcttccagaac
aagcgttatctcgagagtgcaaagtgctatgctctcacgcagaaatattttgaggagatt
gccttaaagtttattgaagccaagcaagaggaggccctgaaggaatttttgcttaagaag
ttgggtaaccttaaacctaatgagaagacacagatcacccttttggtcacctggttaaca
gagctgtatctgaaccgacttggacaactagaggcaggtgaccctaagaatcccctattt
atggacacccgggatgagttccgtcattttctctgcaaccccaaacacagggaattcttc
tacaacaaccgcagtaccatctatgatcttttggcaagccatggcaatgtggatgacatg
gtgtacttctctgttataatgcaggactacgagagggtcatctcgcaccattgccagcac
gatgactacagtgcagccctagaggtgctgtccaagcactgtgatgagaaacttttttat
aagttctccccagttctcatgcagcacattccaaaaaaagtggtagatgcatggattcaa
atgggtaaacgactggacccgaagaaactgatcccagctctggtgaactacagtcaggta
ggcagcgcccagcagatcaacgagacaatccgttacatggagttctgcgtgtatgagctg
ggggtgaaggaggaggccatccataattacctgctgtcactttacgccaaatacaagcca
gattctttgttgttgtatcttgagcaggcaggtactcatgcctctgaaatcaactatgac
ttgaaatacgccttgcgcctttgtgctgaacatggctatcatcaagcttgtgtcttaatt
tacaagattatggagctgtacgaggaagctgtggatctagccttacaagttgatgttgat
ttagccaagtcatgtgccgacctcccggaggatgatgaggagctgaggaagaagctgtgg
ctgaaaattgcccgtcatgtggttcaggaggagaaggatgtgaaaaaggcaatgaactgt
ttgtctagttgcaacctactgaagattgaggacatcttgcctttctttccagactttgtc
acaattgaccacttcaaagaggcaatttgcagctccttggaagagtacaaccagcacatt
gaggagctgaaacaagagatggaggaggccacagagagtgccaagcgcatacgtgaggac
atccaggaaatgaggaacaaatatggggtggtggagtctcaagagaaatgtgctacctgt
gacttccccttactcaacaggcccttctatctcttcctgtgtggacacatgttccattat
gactgtctttttcaggaagtcacccctcaccttactacctataagctaaataagctagag
gagctccagaaaaagcttgctgcgactacgcagaccaccaagtcccgtcacaggcccaaa
gaggaggatactgtcagcctgggaaaaggccagggtagcagagagcagatcaagtcagat
attgatgacatcattgcttctgagtgtgcctactgtggtgagctgatgatcaaatctatt
gataaggcttttattgatccacagaagtttgacgaagagatgtctagctggctctaa
DBGET
integrated database retrieval system
