Colossoma macropomum (tambaqui): 118815695
Help
Entry
118815695 CDS
T09004
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118815695 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118815695 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118815695 (srsf5b)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
SR proteins
118815695 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DbpA
RRM_occluded
SET_assoc
Motif
Other DBs
NCBI-GeneID:
118815695
NCBI-ProteinID:
XP_036437890
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELNGK
ELCNERVTIEHARVRLRGGRGRGGGGRFPDRYGRGSQDSRRNPPPMRTENRLIVENLSSR
VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALEKLSGKEINGRKIKLIE
AARKKSRSRSRSNSSSRSRSRSRSPSRSPKTHKRSRSRSSSPSPSPVQRAKETKRARTDS
GSPPAQRATASRSPSTDSRR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgtcgcattttcatcggccggttgaacccctccgccagagagaaggatgtt
gagcgcttcttcaagggctacggaaggatccgagacatcgacctgaaaagaggctttgga
tttgtggagtttgatgatccaagagatgcagaggatgcggtgtatgagcttaatggaaaa
gagctgtgcaatgagagggttactatagaacatgcccgcgtccgcttgcgtgggggtagg
ggtcgaggaggtggaggacgcttcccggatcgttatggccgtggatcgcaggatagccgg
aggaatccccctcctatgcgtactgagaaccgcctgattgtagaaaacctttcatcaaga
gtgagctggcaggacctgaaggatttcatgaggcaggcgggggaggtaacttttgcagat
gctcatcggccaaagctcaatgaaggcgtggtcgagtttgcctcccacagtgatctgaaa
aatgctcttgagaaactgtctgggaaagaaatcaatggaaggaagatcaagctcattgaa
gcagccaggaaaaagtccaggagtcgttcccgttccaacagctcatcccgttcccgttct
cgtagccgttctccttcccgcagccccaaaacccacaaacgctcccgcagccgctcctca
tcaccctctccctcccccgtccagagagccaaagagacgaagcgggcgcgtacagactct
gggtcaccaccagctcagcgggccacagcctcgcgatctccctctactgacagccgccgc
taa
DBGET
integrated database retrieval system
