Colossoma macropomum (tambaqui): 118816042
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Entry
118816042 CDS
T09004
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04510
Focal adhesion
cmao04512
ECM-receptor interaction
cmao04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118816042 (lama4)
04518 Integrin signaling
118816042 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118816042 (lama4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
EGF_LMN_ATRN
Laminin_I
Laminin_G_3
Phage_scaffold
TS_C
EAD9
Motif
Other DBs
NCBI-GeneID:
118816042
NCBI-ProteinID:
XP_036438439
LinkDB
All DBs
Position
Unknown
AA seq
1866 aa
AA seq
DB search
MARLAVLSLCLLSALSGLTTTSAELEPVFTVCARGFFLSEQNTCLPCNCKGHAHTCEDIT
GICIDCQDHSVGDFCERCEDGYVLEVFLDGRHECRPCACPISLESNNFAAHCDKKGVVLR
CVCQEGYAGHYCERCAPGYYGNPMRVGDSCKKCDCNGNSDPNLIFNECHNVTGQCLHCWG
NTAGHNCERCAPGYYGDAISAKDCRECQCNKCGTASCDDRTGVCHCKPGVTGRLCDQCEE
GYSGFGSCQGCRRCECAPAGLRPTCHPLTHTCQCQPGAGGRHCERCLPGHWDYSPNGCKK
CDCPEGSCDMHTGECLPETSQISECNVDCDECIWHLIGDIRQSNKTVEQLRNTVLNISTG
AAAHDRIKYYNYTALRLQSQFVGWRNKSSVLRRQTGELEEAAATLQAAGELLTLQEDSVA
SLGRRVDEDTLHSSTLAEMLTTNLTTLNVLLEDMISDWELYSVQQEIDPEVQKQKQLEAE
RMLNWIRELDLSPKEPLTTQESAQARELLQRVRQMEKRVIGTEGRVPAVREQLSRFSSKL
SQAQILINKAEDTLQQSYGTYAANQLKLQRLQFQQQRLMENYDAVNQTIMRADEIYAEAN
EGVAELGVMVTNVSEYHAEVDGARASLQNQIDQLSEVDAELVHRATDHAEELNRHADELQ
HNLKGSDANGFVQKALDASNVYDNIVKYIDDANITGLTTYNLSRQAEDAIDGIETQLDFL
KTQSDHMFKESVTLHSEQQEVELSVADTVKYIEETKEMMEKSSRHLADILKDINTVNEGR
RPSQLQLTQEEAVDSLNRSAEVLNTVTPIRERVEEWDRNMRNKLYSTQAYEQAVSSAHHT
VENLSEIVPELLTKLRVVEEKKPVNNVTTNIVRIRELIAQARSVARKIQVSMKFNGQSAV
EVQPPPSVDELKAVTSISFYVRVDPDKDPIEDRFLLYLGDKNGRKDYMGLAIKNDNLVFV
YNLGGDDVEIPLSSKPVSSWPPVFNLVRVERLGRHGKVFLTVPSQQTVAEQKFIQKGEAD
GTDSLLHLDPKDTVFIVGGVPPDVKLPPALSLAPFVGCVELATLNNDVISLYNFKKLHKM
DVASSPPCPRHKLAFTQGRATSYLFDGMGYALVNNIERRGRIGVVTRFDIEVRTVANDGI
LFLMVNQENFFVLELKNGFLRLVYDFGFADGPIIMESDLPKLKINDARYHEVSVIYHFSK
KIILLVDRTFVKSMENEKKPLPFSDIYIGGAPSSLLLSRPELSSLVGLKGCVKGFQFQKK
DFNLLEEPGTIGISSGCPEESFMSRQAYFTGEGYLGSTAKISPFSSFEGGLNFKTLQPSG
LLFYHSEGSDEFSLSLENGAVVLHSRGTKVKSHKKNYSDGRPHFLVASVTKQKYQIVIDD
RDKQEKKNPDPSQSDSTLKAFYYGGSPHSRIQNFTGCISYTYISRQDRDIEAEDFQHYEE
KVNVSLQDCPVERPPAALLSADGKQSASSRKVGRDQPGMPQGILGQQAAPETEATPCHLS
SRPRASRHAHQYSGSAHSRREYGGVSESIRERCHVSMSMRTRSAFGVLLYVSDESDDDFL
TLFLSHGKLTFTFGSAQQELRLQTTDTYNDGQWHNIILVRDDNVGRMVVDGVSVVEEKLP
NRNISLLLQDPLYVGGVPPGRAQKHIPKSSVSSFSGCVRGLQLNGRWISSVSRSFGVTPC
FEGPTEPGAYFSEEGGYVVLDDSFSLGLKFEVVLEVRPRVASGVLLHVFTSAEQFLTVYL
HQGQVIVQVNGGAGRFSTDVSPKGGICDGNWHKITVIRDSNVVQLDVDSEVTHVVGPVIP
ITPNTETPRAPVFIGGAPDSLLPVGVSSRRGLTGCVRNLFVGESAVNLSRSALVSGAVSL
SGCPAA
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtctggctgttctctcgttgtgtttactgagcgctctctctggactgacgaca
acaagcgccgagctggaacccgtcttcaccgtgtgcgcgcgaggtttcttcctgagtgaa
cagaacacctgtctgccctgtaactgtaaaggccacgcccacacctgtgaggacatcacc
ggcatctgcatcgactgtcaggatcacagtgtgggcgatttctgcgagcgctgtgaggac
ggatacgttctggaggttttcctagatggtcgtcacgagtgccgcccgtgcgcgtgtccc
atctctctggagtccaacaattttgctgctcactgtgataagaagggtgttgttctgcgg
tgtgtatgtcaggaaggctacgctggacactactgcgagaggtgtgctcctggttactat
ggtaaccctatgcgcgtgggcgactcctgtaagaagtgtgactgtaacgggaactcggac
cccaacctgatcttcaacgagtgccacaacgtgacggggcagtgcctccactgctggggc
aacacggctggacacaactgtgagaggtgtgcccccggttactacggcgatgccatcagc
gccaaggactgccgggagtgtcagtgtaataagtgtggaacagcgtcgtgtgatgacaga
accggagtgtgtcactgtaagccgggggttacaggacggctgtgtgaccagtgtgaggag
ggctactccggtttcggcagctgtcagggctgccggcggtgtgaatgcgctcctgcaggg
ctgaggcccacctgccaccccctcacacatacctgccagtgccaaccgggggccggaggc
cggcactgcgagcgctgtctgccgggtcactgggactacagccccaacggctgcaagaaa
tgcgactgtcccgagggaagctgtgacatgcatactggagagtgtttaccggaaacttct
caaataagcgagtgcaacgttgactgtgatgagtgtatctggcatctgatcggtgatatc
agacagtccaataaaaccgtggagcagctgaggaatactgtgctgaacatctccactgga
gctgcagctcacgatcgcatcaaatactacaactacacggctctccgactacagtcccag
tttgtaggatggaggaataagtcctcagtgctgaggagacagacaggcgagctggaggaa
gcagcagcaacactgcaagcagctggagaactactgactctacaggaggacagtgtggcg
tctttggggaggcgagtggatgaggacactctgcacagctccacgctagccgagatgcta
acgactaatctgaccactcttaatgtccttctagaagatatgatcagtgactgggagctg
tacagcgtccagcaggagatcgacccggaggtgcagaagcagaagcagctggaggccgaa
cgaatgctgaactggatcagagagctcgacctctcacctaaagaaccgctcactacccag
gagtccgcacaggctcgtgaactcctgcagcgtgtccggcagatggagaagcgtgtgatc
gggactgagggtcgtgttcctgcagtgcgagagcagctcagcaggttcagctccaaactg
tctcaagctcagatcctcatcaacaaggctgaagacaccctgcagcagagctacggcacc
tacgccgctaaccagctcaaactgcagcgtctacagttccagcagcagcgtctgatggag
aattatgatgctgtcaatcaaaccatcatgagagccgatgagatctatgcagaggcgaat
gagggcgtggcggagctgggcgtcatggttacaaatgtgtctgagtaccatgcggaggtg
gacggagcgcgagcgtccttacagaaccagatcgaccagctttctgaggtggacgctgag
ctggtacacagagcgactgaccacgctgaggaactgaacagacacgcagacgagctgcag
cataatttgaagggcagtgatgcaaacggatttgtgcagaaagctctggatgcgtccaac
gtgtacgacaacatcgtcaaatacatcgatgatgccaacatcactggactgaccacgtac
aacctgtccaggcaggctgaagacgccatcgatggcatcgagactcagctggacttcctc
aaaactcagagtgaccacatgtttaaggagtccgtcacactgcactccgagcagcaggag
gtggagctgagtgttgccgacactgtaaaatacatagaagagaccaaagaaatgatggaa
aagtccagcagacacctggcagatattcttaaagacatcaacacagtaaacgaaggacgc
aggccgtctcagctgcagctcactcaggaggaagcggtggacagtctgaaccggtcagcg
gaggtgctgaacacagtgacccccatcagagagagagtggaggagtgggacaggaacatg
aggaacaaactgtactccacacaggcctatgagcaggccgtcagctccgcccaccacaca
gtggagaacctgtctgagatcgttcctgagctgctgactaagctgcgtgtcgtggaggag
aagaagccggtgaacaacgtcaccaccaacatcgtgaggatccgggagctgatcgctcag
gctcgcagcgtcgcccgcaagatccaggtgtcgatgaagtttaacggtcagtctgctgtg
gaggtccagccccccccaagtgtggacgagctaaaggctgtgacctccatcagcttttac
gttcgagtggatccagacaaagaccccatcgaggatcgattcctgctctacctcggagac
aagaatggccgtaaggactacatgggtctggctataaagaatgataacctggtgtttgtg
tataatctgggaggagacgatgtggagattcctctgagctccaaaccggtcagctcgtgg
cctccggtcttcaacctggtcagagtggagaggctcggtcgccatggtaaagtgttcctg
accgtgcccagccagcagaccgtcgccgagcagaagttcatccaaaaaggtgaagcggac
gggacagactctctgctccacctggaccccaaagacactgtcttcatcgtgggaggagtt
ccacctgacgtcaagctgcctcctgctctcagtctggctccgtttgtgggctgtgttgaa
ctggccactctcaacaatgatgtcatcagcctctacaacttcaagaagctgcacaagatg
gacgtggcgtcgtctccgccgtgcccgagacataagctggcgttcactcagggccgtgcg
acgagttatctgtttgatggaatgggttacgctctggtcaataacatcgagagacggggc
agaatcggagtggtcacccgcttcgacatcgaagtccgaacagtcgccaacgacggcatc
ctcttcctcatggtcaaccaggagaatttctttgtgctcgagctgaaaaacggattcctg
cgtctggtgtacgatttcggctttgctgatggtcccatcatcatggagagcgacctgccc
aaactgaagataaacgacgccagatatcacgaggtgtcagtgatttatcacttctctaag
aagataattctgctggtggacagaacttttgtgaagtcgatggagaacgagaagaaacca
ctgcctttctctgatatttacatcggaggagctccatccagccttctgctgtccaggcct
gagctgtcctctctggtgggtctgaaaggttgtgtgaagggtttccagttccagaagaaa
gactttaacctgctggaggagcctggaaccatcggcatcagcagtggctgcccggaggaa
tcttttatgtcccgtcaggcgtatttcacaggtgagggttacctgggctccacagccaag
atttccccattcagctcgtttgagggaggactgaacttcaaaacgctgcagccctccggc
ctgctcttctaccacagcgaagggtcggatgagttctctctctcgctggagaacggcgcc
gttgttctccactccagaggaaccaaagtcaaatcacacaaaaagaactacagtgatgga
cgacctcatttcctggtggcctcagtcaccaagcagaagtatcagattgtgattgatgac
agagataagcaggagaagaagaatccggatccctctcagtccgacagcactctgaaagcg
ttctactatggaggatctccacacagcagaatacagaacttcaccggctgcatcagctac
acttacatcagcaggcaggatcgtgatatagaggcggaggatttccagcattacgaagag
aaggtgaacgtttctctgcaggactgtcctgtggagagaccaccagctgctctgctgtct
gcagacggaaaacagtcagcgtcgtcccgcaaggtgggcagggatcagcctggcatgccg
cagggcattctgggacagcaggcagctccggagacagaggccacaccctgtcacctgtca
tcacgcccacgggccagcagacacgcccaccagtacagcggctccgcccacagcaggcgg
gagtatgggggtgtctcggagagcatcagagagaggtgtcacgtctccatgtccatgaga
acccgctcagcattcggggtgctgctgtacgtgtctgatgagtctgatgatgacttcctg
accctcttcctatctcacggtaaactcaccttcaccttcggctcggctcagcaggagctc
cgcctccaaaccacggacacgtacaatgacggacagtggcacaatataatcctggtcaga
gacgataatgtgggccggatggtggtggatggagtgtcggtggtggaggagaagcttcca
aacagaaacatctcactgctcctccaggatccgctctacgtgggaggagttccacctgga
cgcgctcagaaacacatcccgaagagctcagtgtccagtttttcaggctgtgtgaggggg
cttcagctgaatggacgctggatctcctctgtgtcccgcagttttggagtcacaccctgc
ttcgagggtcccacagagccgggggcgtatttctcagaggaggggggctacgtggtgctg
gacgactccttcagcctggggctgaagtttgaggtggtgctggaagtgcgcccccgtgtg
gcctcaggagtgttactgcacgtcttcacttcagcagaacagtttctgaccgtctacctc
catcagggccaggtgatcgtgcaggtgaacggtggagctgggaggttctccacagatgtc
tcacccaaagggggcatctgcgacggaaactggcacaagatcacagtgatcagagactct
aacgtggtgcagttggatgtggactctgaggtgacccatgtggtcggaccagtgattccc
atcacccccaacacggagacccccagagcgcccgtcttcattggaggagctccagactct
ctgcttcctgtgggcgtgagcagtaggcggggcctgacgggctgcgtgaggaacctgttt
gtgggtgaatctgctgtgaacctcagcaggtcggcgctggtcagcggagctgtgagcctc
agcggctgcccggccgcctga
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integrated database retrieval system
