KEGG   Colossoma macropomum (tambaqui): 118816045
Entry
118816045         CDS       T09004                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03082  ATP-dependent chromatin remodeling
cmao03083  Polycomb repressive complex
cmao04110  Cell cycle
cmao04330  Notch signaling pathway
cmao04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118816045
   03083 Polycomb repressive complex
    118816045
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    118816045
   04350 TGF-beta signaling pathway
    118816045
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118816045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmao03036]
    118816045
Enzymes [BR:cmao01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118816045
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118816045
   HDAC complexes
    Sin3A-HDAC complex
     118816045
    BRAF-HDAC complex
     118816045
    REST complex
     118816045
    SHIP complex
     118816045
    MiDAC complex
     118816045
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118816045
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118816045
  Chromatin remodeling factors
   NuRD complex
    118816045
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118816045
NCBI-ProteinID: XP_036438442
LinkDB
Position
Unknown
AA seq 488 aa
MAFTLQGSKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSAA
GAVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQ
IFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEYM
DKIKQRLFENLRMLPHAPGVQMQVIPEDSVPDDTVDEDTEDPDKRMSIRASDKRIACDEE
FSDSEDEGEGGRRNVTNHKKGAKRARVEEEKKEGEEKKTDVKEEEKVKEGSSEKHESKSV
KTEQTSSA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgttcactctgcagggcagcaagaagaaagtctgttattactatgacggtgatatt
ggaaattattactacggtcagggtcacccaatgaaaccccaccggatccgcatgacccac
aacctcctgctgaactacggcctctaccgcaagatggagatctaccgtcctcataaagcc
acagcggaggagatgacgaagtaccacagtgacgactacatcaagttcctgcgctccatc
cgccccgataacatgtccgaattcagcaaacagatgcagcgctttaatgtaggtgaggac
tgccccgtgtttgatgggctgtttgagttctgtcagctctccactggaggatcagcagcc
ggtgctgtgaagctgaacagacagcagactgatatcgctgtaaactgggccggtggtctt
caccacgcgaagaaatcggaggcgtcaggtttctgctacgtaaacgacattgtactggcc
atcctggagctactgaagtaccaccagagggtgctgtatatcgatattgatattcaccac
ggtgacggagtggaggaggcgttctacaccactgaccgcgtcatgaccgtctccttccac
aaatacggagagtacttccccggaaccggagacctgcgggatatcggagcagggaaggga
aaatactacgctgtgaatttccctctgagagacggaattgatgacgaatcgtacgagcag
atcttcaaaccggtgatggcgaaggtgatggagatgtatcagcccagcgctgtggttctg
cagtgtggagcagattctctctctggagacagactgggctgcttcaacctcaccatccgc
ggtcatgctaagtgtgtagagtatatgaagtcgtttaatctcccgttgctgatgttgggc
gggggaggttatactatccgtaacgtggcgcgctgttggacctacgagaccgctgtggct
ctggacacagacatccctgacgagctgccgtataacgactactttgagtattttgggcca
gacttcaaactgcacatcagtccatccaacatgaccaaccagaacacacaggagtacatg
gacaagatcaaacagcggctgtttgaaaacctgcggatgctccctcacgctcccggagtt
cagatgcaggtcattccggaggacagcgttccggacgatacggtggacgaggacacggag
gatccggacaaacgaatgtccatccgggcgtccgataagaggatcgcgtgtgatgaagag
ttctccgactcggaggacgagggagaaggagggaggaggaacgtcaccaaccacaaaaaa
ggagccaagcgagctcgagtggaggaggagaagaaagaaggagaggagaagaaaaccgac
gtgaaggaggaggagaaggtgaaggagggcagctcagagaagcacgagtctaaaagtgtg
aagactgaacagacgagcagtgcatga

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