Colossoma macropomum (tambaqui): 118816048
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Entry
118816048 CDS
T09004
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
cmao
Colossoma macropomum (tambaqui)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
118816048
NCBI-ProteinID:
XP_036438447
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MDLQVTSVLLLLLVLAEATPERYYHVKKHPYPTKSQPVAGTPGSPGAPGEPGPPGPPGPP
GQPGASGIGHPGPVGPRGPPGPAGYSAPGKPGSPGGPGKPGANGLPGDRGIPGPAGPQGA
RGAPGAPGSPGPAGHSAPGKPGPHGLPGAMGPRGEPGSKGLPGIPGEPGHKGEPGHGIPG
SPGGPGPMGPVGPPGQPGQPGIGKVGATGYPGEPGKPGLPGRDGSPGPIGAPGLKGHTGP
PGIGAAGKPGQNGAPGLPGPTGQKGPQGPAGQPGAPGLPGVGKTGAPGIPGDRGAPGSPG
TTGQKGEPGPTGFTGQPGAMGPIGPAGPQGARGFQGEPGPAGPKGDLGLVGAPGPRGAKG
EQGAHGFSGKPGIPGAAGPPGAPGPVGHQGPKGEAGFTGAPGIPGAIGPAGVKGHPGPQG
IPGSRGENGIPGARGPVGPVGPAGSAGPKGHPGLPGPPGPAGITAKGISGPQGPPGIPGA
RGHDGLPGPAGPPGPPGPPGQIVYHHEKSMPIKSHEYEVMPLSHELVKAPVSAFTALLTS
AYPSAGTPLVFSQIVYNGENHYDPHTGVFTCQIPGLYYFAFHMHVNGANALVALYKNSEA
VLFSYDEYNKGFLDQMSGSAVLLLHSGDRVYVQVPDEQSNGIYADDNVHCSFSGFLIAST
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaagtgacaagcgttctacttctcctcctggttttggccgaggcgacacct
gagagatactaccatgtgaagaaacatccttatccaacaaagagccagcctgttgcaggt
actccaggtagcccaggagcacctggtgagcccggtcccccaggtccacctggccctcca
ggtcagccaggagcaagtggaattggacatccaggaccagtggggcctcgtggaccacct
ggtccagcgggatactctgcacctggaaagcctggaagtcctggtggacctggaaaacca
ggtgctaatggattgccaggagacagaggaattccaggacctgcaggaccccagggagca
cgaggagcaccaggagcccctggcagcccaggtcctgctggccactccgctcctgggaag
ccaggaccacacggtctgcctggtgcaatggggcccaggggagagcctggctcaaaaggg
ctcccaggtattcctggtgagcctggccataaaggagaaccaggtcacggtatcccagga
agccctggtggccctggtccaatgggtcctgtgggccctcctggtcagcctggtcaacct
ggaattggaaaggttggtgcaactggataccctggggaacccggaaagccaggtttgcca
ggtagagatgggtcaccaggtcctattggtgcaccagggctaaaaggccacacaggacct
ccaggtataggtgcagctggaaaaccaggtcagaatggtgctccaggtcttcctggtcca
actggacaaaaaggtcctcagggtccagctggacagcccggagctcctggtctgccaggt
gttggtaaaactggagcaccaggaattccaggagacagaggtgcacctggttctccaggt
accacaggacaaaagggagagccaggcccaacaggctttacaggtcagccaggtgctatg
gggcctattggtccagctggtcctcagggtgctaggggattccagggtgagccaggtcca
gcaggtcctaagggtgatcttggtttggttggagcacctggtccaagaggggcaaagggt
gagcagggagcacatggcttctcaggaaaaccaggaattccaggggcagcaggtccccca
ggtgctcctggtccagtgggacatcagggccctaagggtgaggcaggtttcacaggggca
ccaggcatcccaggagctatcggccctgcaggtgttaaaggtcatccaggaccacaaggt
attccaggtagcaggggagaaaacggcatacctggagcacgaggaccagttgggccagta
gggccagctgggtccgcaggccccaaaggtcatcctggtcttccagggccccctggccca
gcaggaatcactgccaaaggaatatctggcccacagggtcctccaggaatccctggtgcc
agaggtcatgatggtctaccaggtccagctggacctcccggtccacctggtccaccaggt
cagattgtttaccatcatgagaagagcatgcccatcaaatcccacgagtatgaggtcatg
cctcttagtcacgagctggtcaaggcccccgtgtcagcttttactgcccttctgaccagt
gcttaccctagtgcaggaactccacttgtgttcagccagattgtgtacaatggagagaac
cactatgaccctcacacaggtgtgttcacctgccagattccaggactttattatttcgcc
ttccacatgcatgtcaatggtgctaatgcactggtggcactttacaaaaatagcgaggca
gttttgttttcctatgatgaatacaacaaaggcttcctggatcagatgtccggcagtgct
gtccttctcctgcacagtggtgatagagtttacgtccaggttccagatgagcagtccaat
ggcatctatgctgatgacaatgtccactgttctttctctgggttcttgattgcctcaacg
tga
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