Colossoma macropomum (tambaqui): 118816660
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Entry
118816660 CDS
T09004
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao02010
ABC transporters
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118816660
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118816660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmao02000
]
118816660
Transporters [BR:
cmao02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118816660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
118816660
NCBI-ProteinID:
XP_036439061
LinkDB
All DBs
Position
Unknown
AA seq
2229 aa
AA seq
DB search
MGLLTQLRLLLWKNFTLRRRQKLRLVIELVWPLFLFFILVWVRSTNQPTYKGQCHYPNKP
MPSAGVLPWLQGMVCNIQNPCVSQPTPGETPGQVNNFNNSILAKALIEVQSLLADSTLLS
NLKLLSGDINQWSSILQSSNPVNGRSIPLRSVLKDNETFSEYLRSNLSVPTQTAQRLTSV
RVRLNQLPALSAETNLRSTLCSSTSVDRYLEFNSTIQRQEFLNITCSLTPNQLLQTREVL
VRNLDNRKLATALPLALNLNPAETALLLAKTSTHAAPVANQVSKLQSSTLLSAVNGLDFR
SNPFGSLTLLMCGGDSGFNSTKSSNTSSSSNPGFRLPTQSTTALSLNSTHSNSSEFCQNL
VDVLKGTPSLRLFWTTLRPLLQGRVLYTPDTPFTRRVIAQSNSTFDALSKVEVLADTWLE
NEDEIWNFFQNSTQINTLRTLLQNPLFVAALDQQLNGTQLSSALIASFLFNGDEKDRPVG
VPSFDWRNMFNATSQAARLLKEVMGCFDLDKFEAVSSELLLVERAMKLLDEERFWAGIVF
TDLDSPSLVRYKLRMDIEDTERTDKIKDRSWRPSARDNPYNDLRYVRGGFVYLQDMLDHG
IIRTQTGVRQTLGVYTQQMPYPCYVDDAFVSSIATILPMFLVLAYMYTVCQTIKGLVLEK
ELRLKEVLRVVGVRNGPLWFSWFTENMVLLTIPCALISLMVKYGKVLRYSDPSVIFVFLL
VFCMATVMQCFFISVFFSRANLAAACGGLIYFLLYLPHVLCYAWRDVITFRAKLATSLLS
CVAFGYGCENFARYEEQGVGIQWKNIGISSQEDDPYSFIVSIIMMLIDTLLYWILTWYIE
NVFPGQYGIPKPWYFPFTSSYWCGTPVGSYNEPEPLDALEDQNGYLEKASAGLKPGVSIR
NLVKVYKTGKKLAVDKLSLDFYQDQITSFLGHNGAGKTTTMSILTGLFAPTSGTAYVNGF
DIRTDMDSIRKTLGMCPQHNVLFNDLTVEEHIYFYARLKGCSSEEVKQEIDQMIKDVGLP
HKRKELAKNLSGGMQRKLSVAIAFVGGSNVVILDEPTAGVDPYARRGIWELLLKYKTGRT
IILSTHHMDEADILGDRIAIISHGRVCCCGSSLFLKKTYGSGYYLTLVRTNQDKFNNLYK
PQSDIGSLDEGIGSASVCSVEPTDVADVSGLVRRHVPEAEFLEIIGQELVYILPYTGSKD
GTFASLFKELDLERERLGISSYGISDTTLEEIFLKVAEETGVDVETTDKKDALERDWKRS
SRESRTRSISSAMQQRESEASKHGEKKGRFSNRVADGERSVCVNGKGSCVITGWPLIRHQ
FLALFIKRFHHARRSRKGIIAQVVLPAFFVCLSLIFSLIVPPFVEYPSLELQPWMYGKPQ
NTFYSADGPAVAEVVSVTRSLLNEPGFGTRCMESNPIPKYPCVPAGATDWSTPAVDPSIL
EIFANGNWSMQNPSPDCQCSTPQRNIMLPDCPPGAGGLPPPQRTQNTTDTLHDLSGRNMT
DFLLKTYAKSGKIRYGGISVGGVNSQVRMNESEITAALLDLRALFNSSQNDVTDKVFQDL
ETLLIELGTKNNVKVWFYNQGWHSIASFLNIATNAILRGNLPAGLQPKLYGISAFNHPLN
LTKQQLSAVLASSSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPAGY
WVANFTWDMCNYIVPCIIVIVIFLCFQQKAYVSPPNLPALILLLVLYGWSITPMMYPASF
FFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDPNITRINDIVKQVLLIFPHFCLGRG
LIDMAKNQAMATLFSSMGEDRFEEPLGWDMVGKNLFAMAIEGVVMFGFTLLIQYKFCWKP
RLVTGLPVASVEEDEDVARERERVHRGGAQNDLLQICDLTKVYSGKKVPAVDRICVGVPA
AECFGLLGINGAGKTTTFKMLTGDIPASGGEAFLNGYSIRTEMRQVHQNMGYCPQFDAID
DLLTGREHLEFYARLRGVPEREVTTVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTAMA
LIGCPPLIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMV
NGQFKCLGSIQHLKSRFGDGYTVIVRVQDGPADLSSVEDFVCRTFPGSILKEKHHNTLQY
QIPHTEGALSHIFSEFSKHQHALGVEDYSVSQTTLDQVFVNFARQQHDAEDGVYENPVDL
SDEIPMQRC
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttctgacgcagctcaggcttctgctgtggaagaacttcactctgcgcaggaga
cagaagctgcggttggtaattgagctggtgtggccgctgtttcttttcttcattttggtc
tgggtgagatctaccaaccagcccacctacaaaggccagtgccattaccccaacaagcca
atgccctcagcaggagtgttgccatggttacagggcatggtatgcaacatccagaaccca
tgcgtcagtcagccgacgccgggagaaacacctggacaggtcaacaacttcaacaactcg
attctcgcaaaggctctgattgaggtgcagtctctcctggctgactccaccctcctctcc
aacctcaaactgctgtctggtgacattaaccaatggtcctctatccttcagagttccaac
ccagtcaacggtcgatcgattccgttgcgcagcgtgctaaaagataatgagacgttctcc
gaatacctgaggagcaacctgtcagtgccaacgcaaacagcccagagactgacgagtgtg
agagtccgactcaatcagttacctgctctctcagctgagacaaacctgcgctccaccttg
tgtagctccacctccgtggatcgctacctggagtttaactcgaccattcagagacaggaa
ttcctgaacatcacatgctccctgacgcccaatcagcttctccaaaccagagaggtcctc
gttcgaaatctggacaatagaaagctggcaaccgcacttcctttggcactcaaccttaac
ccagctgagacggcactgctgctggccaaaactagcacccatgcagctcctgtggccaac
caggtgtcaaaactgcagtcctcaactttactcagtgcagttaacggtctagacttccgt
tcaaatcccttcggcagtttgactttgttgatgtgtggtggggattcaggctttaactcc
accaagagcagcaacaccagcagcagctccaacccaggctttcgattaccgactcaatcc
acaactgcactcagcttaaactcaacccacagcaactctagcgaattctgtcagaatttg
gttgatgtgttgaaaggtacaccctctctgcgtctcttctggactactctccgcccactt
ctccaaggaagggtcctatacacaccggacacaccctttacaagacgggttatcgcacag
tccaacagtacattcgatgctctgtctaaagtggaggtgctggctgatacctggctggaa
aatgaagatgaaatctggaacttcttccagaacagcactcagatcaacaccctgaggact
ctcctgcagaaccctctgtttgtggcagctctggaccagcagctgaatggaacccaactt
tcttcagctctgatcgccagcttcctgtttaatggggatgagaaggaccggcctgtggga
gtgccatcgttcgactggagaaacatgtttaatgccaccagccaggctgccagattactc
aaggaggtcatggggtgttttgatctggataagtttgaagccgtctccagtgagttgttg
ctggtggagcgcgctatgaagctcctggatgaagagaggttttgggccgggatcgtcttc
actgaccttgactccccctcgctggtcagatacaagctccgcatggacatcgaggacaca
gagaggacagataagatcaaagacaggtcctggagaccgtccgctcgtgataacccctat
aatgacctgcgctacgtgagagggggttttgtgtacctgcaggatatgctggaccacggc
atcatacgcacacaaaccggcgtccggcaaactctgggtgtctacacacagcagatgcct
tatccatgctatgtagacgatgccttcgtgtcgtccatcgccaccatcctgccaatgttc
ctggtgctggcctacatgtacacggtgtgccagaccatcaaaggcctggtactggagaag
gagctgaggctgaaggaggttctgcgtgtggtgggcgttcggaacggaccactgtggttc
tcttggttcacagagaacatggtgctgctgaccattccctgcgcgctcattagtttgatg
gtcaagtacggaaaggtactgagatacagtgacccgtcggtgatatttgtctttctgctg
gtcttctgtatggccacggtaatgcagtgcttcttcatcagcgtgtttttctcgcgggcc
aatctggcggccgcctgcggaggactcatctacttcctgctttacctgccgcacgtgctc
tgttatgcctggagagacgtcatcaccttcagggccaaactcgccacgagtctgctgtcg
tgtgtggcgttcggttacggctgcgagaattttgcacgttatgaggagcagggtgtgggc
atccagtggaagaacatcgggatcagctctcaggaggacgacccctacagcttcatcgtc
tccattatcatgatgctgattgacactctgctctactggattctcacctggtacatcgag
aatgtgtttccaggacagtatgggatacccaagccatggtattttcctttcacctcctca
tactggtgtgggactccggtgggctcctacaacgagccggaacctctagatgcactggag
gaccaaaacggttatctggagaaggcctctgctggactgaagcctggtgtgtctataaga
aatctggtgaaggtgtacaaaactggaaaaaaactggctgtggataagctcagtctggac
ttctatcaggaccaaattacttcattcttaggacacaacggagctggaaagactaccacc
atgtccattctgaccgggctattcgctccaacgtccggcacggcctatgttaacggcttc
gacatccgcacagacatggacagcattcggaagacgctgggcatgtgtccgcaacacaac
gtcttatttaacgacctgaccgtggaggagcacatctacttctacgcccgtctgaaggga
tgcagctccgaggaggtaaaacaggagatagatcagatgatcaaagacgtgggactgccg
cacaaacgcaaggagcttgccaagaacctttcaggtgggatgcagaggaagttatcagtc
gccattgcgtttgtcggcgggtccaatgtggtcatcctggacgaacccactgctggagtg
gatccatatgcgagaagaggaatctgggagctgctgcttaaatataaaacgggccggacc
atcattctgtccacgcaccacatggatgaggcggatatcttgggggaccgtattgcgatc
atctctcatggtcgtgtgtgctgctgtggctcctccctcttcctgaagaaaacatatggc
agcggatattacctcaccctcgtacggaccaatcaggacaaattcaacaacctgtacaaa
ccgcagagtgacatcggcagtctagacgaaggaatcggctcagccagcgtctgcagcgtg
gagccaacagatgtagcggatgtgagcggtctggtgcggaggcatgttccggaggcggag
tttctagagatcataggtcaggagctggtgtacattctcccctacaccggctctaaagac
ggcaccttcgcttcacttttcaaagagctggacctggagagagagaggctgggcatcagc
agctatggcatttcagataccaccctggaggagatatttctaaaagtggcagaagagacg
ggcgtcgatgttgaaactactgataaaaaagatgcgctggagcgagactggaagaggagc
tccagagagtccagaacacggagcatcagttcagccatgcagcagagagagagtgaagct
tctaaacatggagagaagaagggaaggttctcgaatcgagttgcagacggtgagcgctcc
gtgtgtgtaaacggtaaaggctcgtgcgttattactggttggcctctgatcaggcatcag
tttctggccctgttcataaagcgttttcatcacgcacgaagaagcaggaaaggaatcatc
gctcaggtggtcctcccggcgttctttgtgtgtttgtctctgatcttctctctgattgtc
cctccatttgtggagtatcctagtctggagctgcagccatggatgtatggaaaacctcag
aacaccttctacagtgctgacgggccagctgtagcggaggtggtgagtgtgactcgttcc
ctcctgaatgagccggggtttggcacacgctgcatggagagcaaccctatacccaagtac
ccgtgtgttcctgctggagcgactgactggtccactcctgctgtggatccctccatcctg
gagatctttgcgaatggtaactggagcatgcagaatccctcaccggattgccagtgcagt
acaccccagcgcaacatcatgctcccagactgccctcctggggctggaggattaccgcca
cctcagagaacacagaacacgacagacactctgcatgacctttctggccgaaacatgacc
gactttctgctcaagacttatgcaaagtctggaaaaatacgttacggagggatttctgtt
ggaggagtgaactctcaggtcagaatgaacgagtctgagataacggcggctcttttggat
ctcagagctctcttcaactcatcccagaatgatgtaaccgataaggtcttccaggacttg
gagacgttgctgatagagctcggaaccaaaaacaatgtgaaagtgtggttctacaaccaa
ggctggcattcaatagcatcattcctgaacatagccaccaatgccatcctcagagggaat
cttccggccggactgcagccaaaactctacggcatctcagcattcaaccatccactcaac
ctcaccaagcagcagctctccgcagtcttggcatccagttccacagatgtggtggtgtcc
atctgcgtgatcttcgccatgtccttcatcccagcgagtttcgtcctcttcctcatccag
gagcgcgtcagcaaagccaaacacctgcagttcgtcagcggggtgaatcctgcaggctac
tgggtggccaacttcacctgggacatgtgtaactacattgtgccatgcatcatcgtcatt
gtcatcttcctctgctttcaacaaaaagcgtatgtgtcccctccgaacctgccggcactc
atcttactgctggttctctatggctggtcgatcactccgatgatgtaccccgcctcgttc
ttcttcagcgttccgagcacagcgtacgtcgtgctcacctgcatcaacctcttcatcggc
atcaatggcagcgttgccaccttcgtcatggagctgttcgatgatccgaacatcactcgt
atcaacgacatagtgaaacaggtgctactgatatttcctcacttctgtctgggccgagga
ctcatcgacatggctaaaaaccaggccatggctacactcttcagcagcatgggcgaggat
agatttgaggagccgctgggctgggatatggtggggaagaatctgtttgccatggctata
gagggtgtagtgatgtttgggtttacgctcctcatccagtacaagttctgctggaagccc
aggttggtgacagggttgccggtagcgtcggtggaggaggatgaagatgtcgctcgtgag
cgtgaacgagtgcacaggggtggagcccaaaacgacttgcttcaaatctgtgatctcacc
aaggtgtactctggtaagaaggttccagctgtggacaggatctgcgtgggtgtacctgct
gctgagtgttttggcctgttaggtataaacggagctggtaaaaccaccacatttaaaatg
ctgaccggagatatcccagcctcgggaggagaggctttcctcaatggatacagtatccgt
acagagatgaggcaggttcatcagaatatgggttactgtcctcagtttgacgccatagac
gacctgctgaccggacgagagcatttggaattttatgcccgactgaggggggttccagag
cgggaggtcaccacggtggcagagtggggcatacagaaactgggtcttgtgaaatactcc
aacaaatctgctgggacctacagtggagggaacaaacgcaagctgtccacagccatggct
ctcattggctgcccgcctctcatatttctggatgagccgacgacaggaatggacccgaaa
gctcgccgtttcctgtgggactgcatcctgagtgtgatcaaagagggacgctccgtcatc
ctcacctcacacagtatggaggaatgtgaggccctgtgtactcgtatggcgatcatggtc
aatggtcagtttaagtgcctaggcagcattcagcatctgaagagcaggtttggtgatggt
tatacagtgatagtgcgagtgcaggacggtccggctgatttgagctcagtggaggacttt
gtgtgccgcacgttccccggcagcatcctgaaggagaagcatcacaacacgctgcagtac
cagatcccccacacagagggcgcgctctcacacatcttcagtgagttcagcaaacaccag
catgcgctgggagtggaggactattctgtctctcagactacactggaccaggtgtttgtg
aattttgcccggcagcagcacgatgccgaggacggcgtgtacgagaatccggtggacctg
agcgatgagattccaatgcagagatgctga
DBGET
integrated database retrieval system
