KEGG   Colossoma macropomum (tambaqui): 118817069
Entry
118817069         CDS       T09004                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmao03036]
    118817069 (kdm4c)
Enzymes [BR:cmao01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118817069 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118817069 (kdm4c)
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118817069 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Rad9_Rad53_bind PHDvar_NSD Tudor_5 LBR_tudor
Other DBs
NCBI-GeneID: 118817069
NCBI-ProteinID: XP_036439637
LinkDB
Position
Unknown
AA seq 1476 aa
MAGAGANASVNPTCKIMTFRPTMAEFRDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRS
YDDIDDVIIQAPIQQMVAGQSGLFTQYNIQRKALSVQEFRRLANSDTYCTPRYLNYEDLE
RKYWRNLTFVPPIYGADVSGTLYDEGVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKSCEAFL
RHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQVWTQGKDTCVLDHTLATPSTTPELQMWL
QRRRRPKPSTKSSVHYPRTRSKRLKTMQEQVVMANSSSEGGRRTKTGLPQGDKNQEEADQ
LKKDRKAHGALHLSGLAGPCRQICVVKVTRVQSDLLAKSSRCHRDPPQAQPPESQPIQPA
QCEPSTSQDTSTNAKSTNPHKSVAEADGQVSPNEALEICESSTENVPDSGMDETLGSERT
VSGSSIAKSPNSHSPSEHLPTAGPCQSSEAALEVNSKVSARSAGNSLESNKGRVVKTDTD
SKLHSPATKALYKGNPSSDDEPQRSMVTAEIQECGERSGTAHSATSSDMPLLTPEFSEEE
EGRNPPNLTSEMPSLTLAVQSSDDARPSADPNTSSEQPIHPEKSAPLAVDEAGTCSKALY
PDWCSFHENSSKKRSTANLASPWQLPNERANQAGGTGAPAEGRQMSSNVLQHSTVSQAGL
YGCSFDNIQDSMLAANTHALSHANQSVDSPSTSSSQNTPQASLHPQESTSPLGESISFAS
PNVFEDTKPFSSNIWKNFNSQNPAVLIESLQPSLAESDAHDQLPYAMWAESRCQQVKSPE
PPDSPERALTWANLEPSVVHPSGAEMAELPLEGAPEDEFRSQGPQRLKGEGFERDSDSGE
REEDSSSESSEENMSETECGASGLEPGEVCPYPMPSVKRRTAKSWRHPLRKPTARAVPSA
VKQQVTSDDEPSEECGAEGEQHEADVWARPLVHLWQNRKAHFPSEREYNSSAAKMAPHCA
VCTLFMPYYQPEERSDENKVELESQEVRSRPLIPEICFAYREGSCPPNTLLEEDGSSPLV
ACSRCCVQVHASCYGVAAHDVSQEWTCDRCSCGDLTADCCLCNLRGGALKRTTDNRWAHV
MCAVGLPEVKFVDIVKRSPIDVSAIPAQRYKLKCIYCRNRMKKLSGACIQCSCGRCPTSF
HVTCAHAAGVTMEPDDWPYVVFITCHRHQSRSSSAKLKVSRTELALGQTVITKHKNLRYY
SSRVTQVMAQTFYEVMFDDGSFSNDTYPEDIVSRDCAQLGPPEVGEAVQVKWPDGLFYGA
KYLGSNTTYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVKGRLSTASSMRFEDAFFTTQS
ERKRQRTPNSRFQNDYVAHLSPRACRTPETRNSKSN
NT seq 4431 nt   +upstreamnt  +downstreamnt
atggcgggcgccggggcaaatgcctccgttaaccccacctgtaagattatgaccttccga
cccaccatggcggagttccgggacttcaaccagtacctggtgtacatggagtcgcaggga
gctcaccgtgctggactggccaaggtgataccgccgaagggatggaagccgaggcgtagc
tatgacgacatcgatgacgtcatcatccaggcacccattcagcagatggtggccggccaa
tcagggcttttcactcagtacaacatccagaggaaagcgctcagcgtgcaggagtttcgc
agactggccaacagcgacacgtattgcactccccgctacctgaactatgaagacctggag
agaaagtactggcgcaatctgacctttgtgccacccatatatggtgcagatgtcagtggg
acgctttatgatgagggtgttgaagagtggaatatcggacatctgaactccatcctggac
gtaattgaggaggattgcggggtttctattcagggtgtaaacacaccctacctgtacttt
ggcatgtggaagaccagcttctcctggcacacagaggacatggacctctatagcatcaac
tacctgcacttcggagagcccaagtcctggtatgccattcctccagaacatgggaagaga
ctggagcgattagctacaggtttcttccctaacagctttaagagttgtgaagcttttctc
agacataagatgactctgatatctccctccgtgctgaagaaatatggcatcccttttgat
aagataacccaagaggcaggagagttcatgatcacatttccatatggttaccacgctggc
ttcaaccacggcttcaactgtgctgaatccaccaattttgccaccgtgcgctggatcgac
tatggaaaggtcgccactcagtgcacgtgcagtaaggacatggtgaagatctccatggac
ccgtttgtgaggcgtttccagccagaccgttaccaggtctggacacagggcaaagacact
tgtgttctggaccacacgctggccacacccagcaccacacctgagctgcagatgtggctc
cagagacgccgcaggcccaaaccttccaccaaaagcagtgtccactaccctcgcacgcgc
tctaaacggctgaagacaatgcaggagcaggttgtcatggcaaactcctcgtcagagggg
ggtcgacgtacaaagacaggattacctcaaggagataagaatcaggaagaggctgaccag
ctgaaaaaagaccgcaaagcccatggtgcattgcatctctcaggacttgctggtccgtgt
cgacagatttgtgttgtcaaggtaacacgagttcagagtgatttattggccaagtcatct
aggtgtcacagagacccaccccaagcccagccccctgagtctcaacccattcagccagct
caatgtgaaccttcaacctctcaggacacgtccacaaacgctaaatccacaaatccacac
aagtctgtagctgaagcggatggtcaggtatctccaaacgaagccttagaaatctgtgag
tcctccactgagaacgttccggactctggtatggatgagactttgggctcagaaagaact
gtttcaggttcatctattgccaaatccccgaacagtcactctccctcggaacatcttccc
accgctggaccgtgtcagtcttctgaggcggcacttgaagttaacagcaaagtaagtgca
agatcagcgggtaattctcttgaaagcaataagggtagagtcgttaagacggatacagat
tctaagctccacagccctgcaacaaaagcactttataaaggaaatccttcttcagatgat
gaaccacagcgttccatggttactgcagaaatccaggaatgtggagaacgttctggaacc
gcgcattctgctacttcctctgacatgcctctccttactccagagttttcagaggaagaa
gagggacggaaccccccaaacctgacgtctgaaatgccctccttgaccctcgcggtccag
tccagtgatgatgctcgcccgtcagctgacccaaacacttcctcagagcagcccatccac
cctgaaaaatcagctcctcttgcagtggacgaagccgggacttgttctaaagcactttat
cctgattggtgctcattccacgaaaatagtagcaagaaacggtcgacggctaatttggca
tcgccatggcaactgcccaatgagagagccaatcaagcgggaggaacaggagctccagca
gagggcaggcaaatgtcttcaaatgtcttacaacactccacagtaagtcaagcaggtctt
tatggatgtagcttcgataacattcaggattcaatgttagcggctaatactcacgcactt
tcccatgctaatcagtccgtagactctcctagcacttcatccagtcagaacactccacaa
gcttctttacatccacaggagagcacttctccgctcggtgaatccatctcttttgcttcc
ccaaacgtgtttgaggacaccaagcctttctcctccaacatctggaagaacttcaactcc
cagaatcctgcggtgctaatcgagagcctacagccaagcttggctgaaagtgacgctcat
gaccagctgccttacgccatgtgggcggagtctcgctgccagcaggtcaaatcccctgag
cctccagactctccggagagggccctaacctgggccaacctggagcccagtgtggtgcac
ccttctggggcagagatggcagagctacctctggaaggagctcctgaagatgagttcagg
tctcaggggcctcagaggttaaagggcgaagggtttgagcgagattcggattcaggagaa
agagaggaggacagtagcagtgagtccagtgaagaaaacatgagtgagacagagtgtgga
gcttcaggcctggaaccaggagaagtctgcccgtaccccatgccttcagtaaagagaagg
actgccaagagttggcgtcacccactaaggaagccaacagcgagggcagtgcccagcgcc
gtgaagcagcaggtcaccagtgatgatgagccctcagaggagtgtggtgcagagggagag
cagcatgaggctgatgtttgggccaggccgctggttcatttgtggcagaacagaaaagcc
cacttcccctctgagagagagtacaacagttctgcagctaaaatggctccacactgtgct
gtctgcactctcttcatgccttactatcagcctgaggagaggtcagatgaaaataaggtt
gagttggagtcgcaggaagtgaggtcacgacccctgatccccgaaatctgttttgcgtac
cgggagggctcctgccccccaaacacactgctggaggaggacggctccagccccctcgtg
gcctgcagccggtgctgtgtgcaggttcatgccagttgctatggtgttgctgcccatgat
gtcagccaagagtggacatgtgaccggtgttcatgtggagacttaacagctgattgctgt
ttatgtaacttaagagggggtgcattaaaaagaacgacagacaacagatgggcccatgtg
atgtgtgctgtgggacttcctgaggtgaagtttgttgacatagtgaagaggagtcccatt
gatgtcagtgctattcctgcacagcgatacaaactgaagtgtatatattgtcgtaaccgc
atgaagaagctgtccggtgcgtgtattcagtgttcctgtggccgttgtcccacctccttc
cacgtcacctgtgctcacgcagccggtgtcaccatggagcctgatgattggccgtatgtg
gtgttcatcacctgccacaggcaccaatcacggagctccagtgctaagctgaaggtcagc
cgaacagagctggctctgggtcaaacagtgatcaccaagcacaagaacctgcgttactac
agctcccgcgtcactcaagtaatggcccaaaccttttacgaggtcatgtttgatgatggc
tcattcagcaatgacacctaccccgaggacattgtgagcagagactgtgcccagcttgga
ccaccagaagttggagaagctgtgcaggtcaagtggcctgatggacttttctatggtgcc
aaatacctgggctccaacaccacgtacatgtatcaggtggagtttgaggacggttcccag
gtgctggctaagagagaggacatttacacgctggatgaggacctgcccaaaaaggttaaa
ggtcgtctttctacagcctccagcatgcgttttgaagatgctttcttcaccacgcagagt
gagaggaagaggcagcggacgccaaattctcgcttccagaacgactacgtcgcccacctc
agcccacgcgcctgcaggacgcccgaaacacgcaacagcaaaagcaactga

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