Colossoma macropomum (tambaqui): 118817132
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Entry
118817132 CDS
T09004
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmao00536
]
118817132 (slit2)
Glycosaminoglycan binding proteins [BR:
cmao00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118817132 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
EGF_TEN
hEGF
LRR_1
EGF_DL_JAG
EGF_3
LRR_EndoS
Laminin_G_3
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118817132
NCBI-ProteinID:
XP_036439731
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MARAWVAPLLLALLVRGARAQLCPPQCTCAGTAVDCHAQGLRSVPRGITRSAERIDLNNN
NLTKITKADFAGLRHLRVLQLMENKISVIERGAFQDLKELERLRLNRNNLQVLPELLFLS
TTKLSRLDLSENQFQGIPRKAFRGATDLKNLQLDYNQISCIEDGAFRALRDLEVLTLNNN
NISRLSVNSFNHMPKLRTFRLHSNNLICDCHVAWLSDWLRQRPRLGLYTQCMAPPSMRGH
NVAEVQKREFVCTGSYSQSSCSVLQCPEFCTCSNNIVDCRGKGLTEIPTNLPETITEIRL
EQNSIKIIPPGAFSPYKRLRRIDLSNNQISELAADSFQGLRSLNSLVLYGNKITELPKGL
FEGLFSLQLLLLNANKINCLRVDAFQDLQNLNLLSLYDNKLQTIAKGTFSSLRSIQTLHL
AQNPFMCDCHLKWLADYLQENPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFIP
GVEDYRSKVGGSCFADLACPDKCRCEGTTVDCSGQKLTKIPDHIPQYTAELRLNNNEFTV
LEATGIFKKLPQLRKINLSSNKISDIEEGTFEGAAGVNELVLTSNRLENIHYGMLKGLTG
LRTLMLRSNKISCVSNSSFTGLSSVRLLSLYDNLITSIAPGAFDTLHSLSTLNLLANPFN
CNCHLAWLGEWLRKKRIVTGNPRCQNPYFLKEIPIQDVAAQDFACEDGNDENSCSPLARC
PAECSCLDTVVRCSNKGLKVLPKGIPKDVTELYLDGNQFTQVPLELSNYKALTLIDLSNN
LISTLSNYSYSNVSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPEGAFKD
LSSLSHLALGANPLYCDCGMQWLSEWVKSGYKEPGIARCAGPADMADKLLLTTPSKKFTC
TGPVEISIQAKCDPCLSNPCKNNGTCTNHPIDFYRCTCPYGYKGQDCEEPIHACISNPCQ
NGGTCHLKDGVENTHWCMCPEGFEGDECEINIDDCEDNDCENNSTCVDGINNYTCLCSPE
YTGELCEDKLDFCAPELNQCQHNSKCILTARGYKCECTPGYTGDHCELDFDDCVDNKCKN
GAQCIDALSGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNYDCANGAECVVKDTDPVCQC
LHGYAGVKCERLISVNFIGGDAYVQVSSELLTEPINITLQIATEEDNGVLLYKADSGQIA
VELYRGRLRVSYDTGSYPPSAMYSAETVNDGSFHVVELVVKDQSLSLSINGGSPKSIPAV
NKPNSRPGTAPLYFGGIPLQSGVSLQQDSGDRNGSSFHGCIRNLYINDQLQDLSRFILRG
GVVPGCQPCQRSICVHGQCHATGHSAFSCECEAGWTGQLCDQQINDPCLGNKCVRGTCVP
INSYSYSCRCVPGYVGVLCDEEESFSPCQALACKHGHCHVSGLGKAYCQCNSGYAGQHCD
REVACRGERVRDHYQRQQGYAACQTTEKVSRLECKGSCEGGATCCSALRTKRRKYTFQCT
DGSSFVQEVEKVVKCGCTKCPS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcttgggtcgcgccgctgctgctcgcgctgctggtccgcggggcgcgcgcg
cagctctgtccgccacagtgcacatgcgcggggaccgcggtggactgccacgcgcaggga
ctaaggagcgtcccgaggggcatcacgaggagcgccgagagaattgacctcaacaataat
aatctgactaaaatcaccaaggctgattttgcggggctccgacacttacgagtgctgcag
ctgatggagaacaagatcagtgtgatcgagagaggagcgtttcaggacctgaaagagttg
gagagactgaggttaaacaggaataatctacaggttttaccagagctgctgtttctctca
acaactaaactctccagactagatttgagtgagaatcaatttcagggcattccaaggaaa
gctttcagaggagctacagacctcaaaaacctgcagctggactataatcagatttcctgt
attgaagatggagcattccgagccctgcgggacctggaagtgctgacgctgaacaacaac
aatatctctcgtttgtcggtgaacagttttaaccacatgcccaaactccgcacgtttcgt
ctacactccaataatctgatttgtgattgtcatgtggcgtggctctctgattggctacgg
cagagaccccgtctcggtctgtatacccagtgtatggctccgccctctatgaggggacac
aatgtagccgaggttcagaagagggagtttgtctgtacaggttcttactctcagtcgtcc
tgtagtgtcctgcagtgtccagaattctgtacatgcagtaataatatagtagactgtcga
ggtaaaggactcactgagattcccaccaacctgccggagaccatcactgagatacgtctc
gagcagaactccatcaaaatcatcccacctggcgctttttcaccatacaaacgcctgagg
aggatagatctcagtaataatcagatttctgaactggctgcagattcttttcaaggtctc
cgctcactaaactcactggttttatatggtaataaaatcactgaacttcctaaaggactg
tttgagggactcttctctctacagttactgttgctaaatgcgaataaaataaactgtttg
cgcgtagacgccttccaggacctgcagaacctcaacctgctctctctgtacgacaataaa
ttacagacaattgctaaaggcaccttctcctcactgagatccatacagacacttcacctg
gcgcagaaccctttcatgtgtgactgtcacctgaagtggttggccgattacctgcaggag
aatccaattgagaccagtggagcacgctgcaccagcccacgacgcctcgctaacaaacgc
ataggacagataaagagcaaaaaattccgctgttcagctaaagagcagtatttcatacca
ggtgtagaagattaccgctctaaagtgggaggaagctgttttgctgacctggcgtgtcct
gataagtgccgctgtgagggaaccacagtggactgttctggacagaaactgaccaagata
ccagaccacatcccacagtacactgcagaactgcgattaaacaataacgagttcactgtg
ttggaggccactggaatctttaaaaagctcccacaactgcggaaaattaatctgagcagt
aataagatcagtgatatcgaggagggaacatttgaaggagctgctggtgttaatgaactt
gttctgactagcaaccgtctggagaacattcactacggcatgctgaagggtctaacaggc
ctgagaacactgatgttacgcagtaataagataagctgtgtcagtaatagcagcttcact
ggtctgagttcagtacggctgctctctctctatgataacctgatcacctctatcgcccca
ggagccttcgacacactccactctctctccacacttaatctgctggccaacccatttaac
tgtaactgtcacctggcatggctgggcgagtggctgaggaagaaaaggatcgttacagga
aacccgcgctgtcagaacccctacttcttgaaggaaatcccaatacaagatgtggctgcg
caggacttcgcctgtgaggatggtaatgatgagaatagctgttctccattggctcggtgt
ccagctgagtgttcatgtttggacactgtggttcgctgtagtaataaaggactgaaggtt
ttacccaaaggaattcctaaagacgttactgaactatatctggatggaaaccagttcacc
caggttcctctggagctctccaactataaagccctcacgctcatcgatttgagtaataat
ctaatcagcacgctgtccaactacagctacagtaacgtgtctgagctgctaacactaatc
ttaagctacaacagactgaggtgtattccagcaaaagccttcgacggactcaaatctctc
cgattactctctctccatggcaacgacattgcagtaattcctgaaggggcttttaaagac
ctttcctctctctctcaccttgctctgggggcaaatccactgtactgtgactgtggaatg
cagtggctctctgagtgggtgaagagtggctataaagagccaggtattgcccgctgcgct
ggacctgcagacatggccgataaactcctgctgaccacgccctccaaaaaatttacctgt
acaggtccagtggaaatcagtatccaggcgaagtgtgacccatgtctatcaaacccttgt
aagaacaatggcacctgcaccaaccaccccatagacttctacaggtgcacctgcccgtac
ggatataagggtcaggactgtgaggaacccatccatgcctgcatcagtaacccctgtcag
aatggaggaacctgccacctgaaggatggagtggagaacactcactggtgcatgtgtcca
gagggctttgagggagatgagtgtgagattaatattgatgactgtgaagataacgactgt
gaaaacaactccacctgcgtagacggaattaacaactacacctgcctctgctcacctgag
tatacaggagagctgtgtgaggataagctggatttctgcgctccagagttgaatcagtgt
caacacaactccaaatgcatcctcactgcacgcggatacaagtgtgagtgtactcccggt
tatacaggagatcactgtgagctggactttgacgactgtgtggataataagtgtaagaat
ggagcgcagtgcattgatgcgctcagtggctacacatgcgtgtgtcctgaaggttacagt
ggtttgttctgcgagttttctcctccaatggtgttgccccgcaccagcccatgtgacaac
tacgactgtgccaacggagcagagtgcgtagtcaaggacacggaccctgtgtgtcagtgt
ctccatggttatgcaggggtgaagtgcgaacgactgattagtgtaaacttcatcggcgga
gacgcttacgtccaggtttcttctgagctccttactgagccgatcaacataaccctgcag
attgctacagaagaggataacggtgtgctgctgtataaagcagacagtggacagatcgct
gtggagctttacagaggcagactgagggtcagctatgatacaggatcatatcctccatca
gctatgtacagtgcagagacggtaaatgatggcagtttccatgtggtggagctggtagta
aaggatcagtctctctcactatccatcaatggaggaagccccaaatccatcccagctgta
aacaaacccaactcaagacctggcactgctccgctgtactttgggggtattcctcttcag
tccggtgtatcgctccagcaggattctggtgatagaaatggttctagcttccatggctgt
atccggaacctgtacattaacgatcagctgcaagatctctcacgatttatactgcgggga
ggtgtggtgcctgggtgccagccatgccagcgcagcatctgtgtgcatgggcagtgccat
gctacaggtcactcagcattcagctgtgagtgcgaggcaggctggactggtcagctgtgt
gaccagcagatcaacgacccctgtcttggcaacaagtgcgtgagaggaacctgtgtgccc
ataaactcatactcgtacagttgccgatgtgtgccgggttacgtgggcgttctgtgtgat
gaggaggagagcttcagtccatgccaggctctggcctgcaaacacggacactgccatgtc
tccggcctgggcaaggcctactgccagtgcaacagcgggtatgctgggcagcactgtgac
agagaggtggcgtgtaggggagaacgggtccgagatcactatcagaggcagcagggttac
gcggcctgccagaccacggagaaagtctcccgcctagagtgtaaaggcagctgtgagggt
ggggctacctgctgctccgcccttcgtaccaaacgcaggaaatacacctttcagtgcacg
gatggctcctcattcgtccaggaggtggagaaggtggtcaagtgtggctgtacaaaatgt
ccatcctaa
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integrated database retrieval system
