Colossoma macropomum (tambaqui): 118817368
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Entry
118817368 CDS
T09004
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04136
Autophagy - other
cmao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118817368 (atg13)
04136 Autophagy - other
118817368 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118817368 (atg13)
03029 Mitochondrial biogenesis [BR:
cmao03029
]
118817368 (atg13)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118817368 (atg13)
Atg1 complex
118817368 (atg13)
Mitochondrial biogenesis [BR:
cmao03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118817368 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118817368
NCBI-ProteinID:
XP_036439894
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MDSDLSPQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFTLAIKDIPE
VTHEAKKALAGQLPSIGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYTR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLSGLGEGFQTVRVGIVGTPI
GTLTLSCAYRTNLALMSSRRFERTGPIMGIIIDHFVERPLSNTAIMHPCNYRAPGEEEGG
AYAGVEDSQEVCTTSFSTSPPSQCVCTVSQAHSKTPKPALMATLKVPMMGLGFSQQLCTS
RLSYQTPPLGAVDVCHPAACTAIAHPHQMAVPGKEGGVPQVLLQPSHGTQADHGRAPSCP
TADMHHQPPPSSCSSGDADVLSRSSEVKSASPSDALETTFTRKVGAFVNKPTTQVTTASL
DLPFAAFAPKAYDLEENDPMVHPPASPTPSSPLQGSLHSQSSSQSGGQAQDDFVMVDFKP
AFSKDDLLPMDLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDA
FVDTLQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgatttgagcccacaggacagaaaagacttggacaaattcattaaatttttt
gccttaaagactgtgcaggtgattgttcaggctcgactgggtgagaagatctgcactcgc
tcatcttcgtcccccactggctcagactggtttactcttgcaattaaagacatcccagag
gtgactcatgaagccaagaaagctctggctgggcagctacccagcattgggcgttctatg
tgtgtagagatctccctgaaaacctcagagggtgattcgatggagctagaaacatggtgc
ctggaaatgaatgaaaagtgtgaaaaagacattaaagtgtcctacacggtttatacccgc
ctgtctctgttgctcaaatctctcctggctatcacaagagttactcctgcttacaaactc
tcacgcaagcaaggccatgattacgtcattctgtacaggatatattttggagatgtgcag
ctatcaggacttggggaaggcttccagacagtacgtgtaggcattgtggggactcccata
gggaccctcaccctgtcctgtgcatatcgcaccaatcttgccttgatgtcttccaggcgg
tttgaaaggacgggccccatcatgggcattatcattgaccactttgtggagcgccccctc
agcaacacagccatcatgcacccctgcaactacagggctccaggtgaggaagagggagga
gcttatgccggtgtggaggactcccaggaagtctgcaccacctcgttttccacttctcca
ccttctcagtgtgtgtgcactgtaagtcaagcacatagtaagactcctaagcctgctctg
atggccactctgaaggtccccatgatggggctgggcttctcacagcaactatgtacttct
cgtctgtcatatcagacgcccccgctgggtgcagtagatgtgtgtcatcccgcagcttgc
actgccattgctcacccccaccagatggctgtgccagggaaagagggtggagtcccgcag
gtgctgcttcagcccagtcatggcactcaggctgaccatgggcgtgccccttcttgccct
actgcagacatgcaccaccagcctccaccctccagctgcagcagtggtgatgcagatgtg
ttgtcaaggagcagtgaggtgaagagtgcatccccttcagatgcactggagacaaccttc
accaggaaagtaggagccttcgtcaacaaacccacaacacaggtgacaacagccagtctg
gatttgccatttgctgcatttgctcccaaagcatatgacctggaggagaatgaccccatg
gtgcatccaccagcatcaccgactccctcatccccgctgcagggcagccttcactctcag
agctccagccaaagcgggggccaagcacaagacgactttgtcatggtcgactttaagcca
gcattctccaaggatgatctgttgccaatggacctgggtactttttatagagagtttcag
aaccctccccagcttgccagcctgtccatcgacgtcagcgcacagtctatggctgaagac
ctggactctctgccagagaaactggccatctatgagaagaacattgacgagtttgacgca
tttgtggacacgctacagtag
DBGET
integrated database retrieval system
