Colossoma macropomum (tambaqui): 118817458
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Entry
118817458 CDS
T09004
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118817458 (irx3a)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118817458 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
118817458
NCBI-ProteinID:
XP_036440055
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQERQGMGGGRSGPELSPSGALSSVLSSMYGSPFAAAQTYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPAFAPHHAAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTDEE
GNVYGSDHEGEDGDKREDEEEIDLENIDTENIESKDDLDEQDELHSDLKLDGSCDSEISD
GYEDLHGPDPKFLKAVVKEGKDAHADRAENFHHHHHHHHLHHHALDLKMQAPNGEQIKLN
QVPNSPPNENNPPPVQKPKIWSLAETATTPDNPRKSPLMNGTSSGPGAQTIVPPHRLISC
PVGKIQNWANRAFSAHQLALLNSNHYLGLANQASALYSNRQAEERSPSSETAATGTCHPH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggatatcagtacatccggccgatatacccgcaggagaggcag
ggcatgggcggcgggcgcagcgggcccgagctgagcccgtccggcgcgctctccagcgtg
ctgtcctccatgtacggatccccgttcgccgccgcgcagacctacggagctttcctccct
tactccaacgacctgtccattttcaaccagctgggagctcagtacgaactaaaggacagt
ccaggtgtccagcacccagcgtttgcccctcatcacgctgctttctacccctacggccag
taccagttcggtgacccgtccagacccaagaacgccacccgcgagagcacgagcaccctg
aaggcctggctgagcgagcaccggaagaacccgtaccccaccaagggcgaaaagatcatg
ctggccatcatcactaagatgaccctcacccaagtgtccacctggttcgccaacgccagg
aggaggctgaagaaggagaacaagatgacgtgggcgccccggaaccgcacggacgaagaa
gggaacgtgtacggcagcgaccacgagggcgaggacggggacaagcgcgaggacgaggaa
gagatcgacctggagaacatcgacacggagaacatcgagagcaaggacgacctggacgag
caggacgagttgcactccgatttgaagctggacggcagctgcgactcggagatctcagac
ggctatgaggatttacatgggcccgatccaaagtttttgaaagccgtggtcaaagagggc
aaagacgcgcacgcggaccgggccgagaacttccaccaccaccaccatcatcaccacctc
caccaccacgctctggacctcaaaatgcaggcgcccaacggcgaacaaatcaaacttaac
caggtccccaactccccccccaacgaaaacaacccgccccccgtccagaaacccaagatc
tggtctctggccgagacggcgacgaccccggacaatccccgcaaatctcccctaatgaac
gggacctcctccgggcccggcgcccagaccatcgtccctcctcacagactcatctcgtgt
cccgttgggaaaattcagaactgggcgaaccgggcattttccgcgcaccagctcgcctta
ctgaactcgaaccattatttgggactggccaaccaggcttcggccctctactccaacagg
caagcggaggagcggagtcccagctcagagactgcggccacaggtacatgccaccctcac
tga
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