Colossoma macropomum (tambaqui): 118817764
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Entry
118817764 CDS
T09004
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118817764 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmao03009
]
118817764 (emg1)
Enzymes [BR:
cmao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
118817764 (emg1)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
90S particles
Other 90S particles
118817764 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
118817764
NCBI-ProteinID:
XP_036440571
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MAAHVGKKRGLEHLDQYEPKPAKQQRSLHEKMTEKRLVVILEGATLETVKVGKTFELLNC
DQHKNMIIKNGRDPGNVRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFPRFCGLMVQLLHKLSVRAADGPQRLLRLIKNPVSDHLPPGCPRFATSFKTGDAVCP
RTVVPKDGPAAIVIGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKICSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcacgtaggaaagaagcgtggcttggagcatttagaccaatatgagccaaaa
ccagccaaacagcagcgaagcctccacgagaaaatgacagagaagcgattagttgtaatt
ttggaaggagctacgctggaaaccgtaaaggttggtaaaacatttgagctgctgaactgc
gaccagcataagaatatgataataaaaaacggaagggaccctggcaatgttcggccggat
atcacacatcagtgcctgcttatgttaatggacagcccgttgaacagagcaggactgctg
caagtatacattcacacagagaagaatgctctcatcgagatcaatcctcaaacacggatt
ccccgcaccttccctcgcttctgtggacttatggtgcagctcctgcataagttgagtgtc
agagcagctgatggtcctcagcgcttgctaagactgattaaaaacccggtttcagaccac
ctgcctccaggctgcccacgttttgccacatctttcaaaacaggagacgcagtctgtcct
agaaccgttgtccctaaagatggtcctgctgctattgttataggggcttttgcacatgga
gcagttaatgtggactacaccgagaagacagtgtccatcagtaactaccctctgtctgct
gccctgacgtgcgccaaaatatgctctgcctttgaggaggtctggggggtgttgtga
DBGET
integrated database retrieval system
