Colossoma macropomum (tambaqui): 118817794 Help Entry 118817794         CDS       T09004                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cmao  Colossoma macropomum (tambaqui) Pathway cmao03040   Spliceosome Brite KEGG Orthology (KO) [BR:cmao00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     118817794 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmao03021]     118817794 (sf3b3)    03041 Spliceosome [BR:cmao03041]     118817794 (sf3b3)    03036 Chromosome and associated proteins [BR:cmao03036]     118817794 (sf3b3) Transcription machinery [BR:cmao03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      118817794 (sf3b3) Spliceosome [BR:cmao03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     118817794 (sf3b3)  Complex B     118817794 (sf3b3)  Complex C    U2 SnRNP specific factors     118817794 (sf3b3) Chromosome and associated proteins [BR:cmao03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      118817794 (sf3b3)     TFTC complex      118817794 (sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  118817794 NCBI-ProteinID:  XP_036440618 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKVHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTVPVATAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASLVRLVNPIQGNTLDLVQLEQNEAAFSVAVCRFANGG DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGDKLEFLHKTPVEDVPLAIAPFQGRAL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDIQESLFWVRYKRNENQ LIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIVNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctcaccttgcagcgtgcgactggcattactcatgccatccatggc aacttctcaggcacaaaacagcaggagattgttgtttcccgaggaaagattctagaactg ctgcgtcctgatgccaacacagggaaggtccacacactgctcaccatggaggtgtttggc atcatccgctccctcatggccttcaggctcactggtggaacgaaagactacattgtggtg ggcagtgactcaggacgtattgttatcctggagtaccagccttcaaagaacatgtttgaa aaagtgcaccaggagacctttggcaagagtggctgtcgacgcattgttcctggacagttc ttggctgtggaccccaaaggcagggctgtcatgataggtgctatagagaagcagaagtta gtatacattttgaacagagatgctgctgctcgcctcaccatctcatctcctctggaagcg cacaaagccaacacacttgtctaccatgttgtcggggtggatgttggctttgagaacccc atgtttgcctgccttgagatggactatgaggaagccgataatgaccccacaggagaggca gcggcaaacacgcagcagactctgaccttttacgagttggacctggggctcaaccatgtg gtgcgcaagtacagcgaggctctagaggagcacggcaatttcctaatcacagttccaggt ggctctgatggacccagcggagtgcttatttgctcagagaattacatcacttacaagaac tttggagaccagccagatatccgctgccccatcccacgccggagaaatgacttggatgac cctgagaggggcatgatcttcgtctgctctgccacacacaagaccaagtccatgttcttc ttcctggcccagactgagcaaggagacattttcaaggttaccttggaaacagatgaggag atggtcacagagatcaggatgaaatactttgatactgttcctgtggccacagccatgtgt gtgctgaagactggtttcttattcgtggcatcagaatttggaaaccattacctgtatcag atagctcacctgggtgatgatgatgatgaaccggagttctcttctgccatgcctctggag gaaggggacacctttttcttccaaccacgacccctcaagaacctggtgcttgtggatgag caggagaacctgtcccccatcatgtcatgccagattgctgatttggccaatgaggacact cctcagttgtatgtagcgtgtggaaggggacctagatcaactttgagggttctcagacat ggattggaggtctcagagatggctgtctctgaacttcctggtaaccccaatgctgtgtgg accgttaggaggcacatagaagatgagtttgatgcctacatcattgtgtccttcgttaac gccactctggtgctgtcgattggggaaactgtagaagaagtgacagattcaggttttctg ggtactaccccaaccttgtcctgctctctgttgggggatgatgctctggtgcaagtttat ccagatggcatccgccacatccgagcagataaacgtgtgaatgagtggaagacaccaggg aagaagaccattgttcgctgtgctgtcaaccagcggcaggtggtgatcgctctgacagga ggagagctggtctactttgagatggacccgtcgggccagttgaatgaatacacagagaga aaggagatgtctgcggacgttgtgtgcatgagccttgctaatgtccctccaggcgaacag cgttcacgcttcttggcagtgggcctggttgacaacacagtgcgcattatatctctggac ccctcggactgtctgcagccactgagtatgcaggctctgcctgcacagccggagtctctg tgtatagtggagatgggaggcgtggagaaacaggacgagctaggagagaaaggcaccatc ggcttcctgtacctcaacatcggcttgcagaacggtgttttgctgcgtacagtgctggac cctgtaactggagacctgtccgacactcgcacccgctacctgggctctcgccctgtcaag ctcttcagagtgaggatgcagggccaggaggctgtgctagccatgtctagtcgttcctgg ctgagctactcataccagtcgcgtttccatctgacgccgctgtcctatgagactctcgag tatgcttcaggattcgcctcagagcagtgtcccgaaggcatagtggccatttccaccaac acactgaggattctggctctggagaagctgggtgccgtctttaaccaggtagccttccca ctgcagtacacgccacgcaaatttgtcattcacccagagaccaacaacctaatcctcatc gaaacagaccataatgcctacacagaggccaccaaggcccaacgtaagcagcagatggcg gaggaaatggtagaggctgcaggagaggatgagagggagttggccgcagaaatggctgct gcctttttgaatgagaatcttccagaagctatatttggtgcccctaaagccggatcagga cagtgggcatcactggtgcgcctggtcaaccccatccaggggaacacactggacttggtc cagctggagcaaaacgaggcagcattcagtgtggctgtatgtcgatttgctaatgggggt gatgactggtatgtgctggtgggcgtggccagagatatgatccttaacccacgctcagtg ggtggtggctacatttacacctaccgccttgtagggggtggagacaagctggagttttta cacaagaccccagtagaggatgttcccctagccattgcgcccttccagggcagagccttg gtgggtgtgggcaaactactgcgcatttacgacttgggcaaaaagaagctgctccgtaag tgtgaaaacaagcacgttccaaacctggtgacgggcatccacaccattggccagcgcgtg attgtgtcagacatccaggagagccttttctgggtgcgatacaagcgcaatgagaaccag ctcattatctttgctgatgacacgcatccacgctgggtcactactgcatgcctgctcgac tacgacaccatggcctcagctgacaagtttggaaatatcagtattgttcgtttaccacca aataccagcgatgatgtggatgaggaccccacagggaacaaagccttgtgggacagaggc ctgcttaacggagcgtcgcaaaaggctgaagtaattgtgaactaccacattggagagaca gttctgtccctgcagaagaccacccttatccctggaggctcggagtctctggtgtacaca actctgtcaggaggtatcggcatcctggtgcccttcacttcccacgaggaccatgacttc ttccagcacttagagatgcacatgcgctctgaatttcctccactgtgtggcagagaccat ctcagcttccgctcctattacttccctgtgaagaatgtgattgatggagatctgtgtgaa cagtttaactctatggatccacataagcagaaaagtgttgctgaagagttggaccgcaca ccaccagaggtgtctaagaaactggaagacattcgcacacgctacgccttttga

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