KEGG   Colossoma macropomum (tambaqui): 118817876
Entry
118817876         CDS       T09004                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03420  Nucleotide excision repair
cmao04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118817876 (ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118817876 (ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118817876 (ddb1)
   03400 DNA repair and recombination proteins [BR:cmao03400]
    118817876 (ddb1)
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     118817876 (ddb1)
DNA repair and recombination proteins [BR:cmao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      118817876 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118817876 (ddb1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 118817876
NCBI-ProteinID: XP_036440746
LinkDB
Position
Unknown
AA seq 1148 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLKEKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMDGRLFMLLLEKEELIDGSMVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVAHQQLFRVYVFVHVQIT
SGSVRLVTQDSKALVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLQILSGELKQISST
EMEHEVACLDITPLGENGGESSLCAVGLWTDISARVLRLPCFSPLHKEMLGGEIIPRSIL
MTTFEGSHYLLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFAC
SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHI
RTVPLYESPKRICYQEVSQCFGVLSSRVEMQDANGTTAPVRASASTQALSSSVSSSKLFP
SSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYALSLVSCKLGKDPAVYFIVG
TAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYE
WTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPN
WMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSL
VLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSF
WRSFNTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKI
VEELTRIH
NT seq 3447 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtcacagcgcagaagcccacggcggtgaacgcctgtatcacc
gggcacttcacctctgcagaggatctgaacctgctcatagcgaagaacacacggctggag
atctatgtggtcaccgctgagggattgcggcctgtcaaagaggtcggcatgtacgggaag
attgctgtcatggagctcttcaggcctaaaggagagagtaaggaccttctgttcattttg
actgccaaatacaatgcatgcatcctggagtacaagcagaatggagacagcattgacatc
atcactcgtgctcatggaaatgtccaggatcggattgggcgtccctcagagacaggcatc
attggcattgtggaccctgagtgtcgtatgattggcttgcgactctacgatggtctcttt
aaagtcataccactggatcgtgacaaccgtgaacttaaggcctttaacattcgactagaa
gagctgcaggttatagatgtgcacttcctttatggctgccaggcccccaccgtctgtttc
atataccaggaccctcagggccggcatgtaaagacatatgaggtctctctaaaggagaag
gagttcaataagggcccttggaaacaagagaatgtggaagctgaagcctcaatggtcatc
ccagttcctgagccatttggcggtgccataattattggtcaggagtccattacttatcac
aatggagacaaatacctggcaatcgcacctccaacaattaagcaaagtacgattgtctgt
cataaccgtgtggacccaaatggttctcgctatctgctgggtgacatggacggaagactg
ttcatgctgctgctggagaaggaggagctaatagatggatccatggtgctcaaagacctg
cgagtggaactactgggagagacctccattgctgagtgtctcacatacctggataatgga
gtggtgtttgttggttctcggcttggagattctcaactggtcaagctgaatgtggacagt
aatgaccagggctcatatgtagcagttatggagactttcactaaccttggccccatagtg
gacatgtgtgtggtggatctggagagacaaggtcaaggccagctggtgacttgctcgggt
gcctttaaggagggctctttaaggatcattcgtaatggaataggaatccatgagcatgcc
agtattgacctgccaggcatcaaaggactatggcctcttcgctctgaggcaggcagagag
actgacgacatgctggtgctttctttcgttggccagaccagggtgctgatgttgagtggg
gaggaagtggaggagactgaacttccagggtttgtggataatcaacagaccttcttctgt
ggtaatgtagctcaccagcaactattcagggtttatgtttttgttcatgtgcagatcact
tcagggtcagtgcgactagtaactcaggacagtaaggctctggtcagcgaatggaaggag
cctcagggtaggaacatcagtgtcgctgcctgtaactcaacccaggtggtgcttgctgtg
ggcagagtgctctactacctgcagattctcagtggagagctcaaacagatcagttccaca
gagatggagcatgaggtggcttgtctggacatcactccgctgggtgagaatggtggagag
tccagcctgtgtgctgtaggcttgtggactgatatctcagctcgagttctcagactgccc
tgcttcagtcctctgcataaggagatgctgggaggagagattatcccacgttccatcctc
atgaccacttttgaaggcagccattatttgctgtgtgctctgggagatggtgctctcttc
tactttggacttgacttacagacaggtgttctgagtgagcggaagaaggtgacgctgggc
actcagcccacagtgctgcggacctttcgctctctgtccacctccaacgtgtttgcttgc
tcagatagacccactgtcatctactccagtaaccacaaactcgtcttctccaacgtcaac
ctcaaagaggtcaactacatgtgtccactcaactctgagggataccctgacagcttggct
ttggccaataacagcactttgaccattggcactatcgatgagatccaaaaactccacatt
cggactgtccctctttatgaatcacctaagaggatctgctatcaggaggtgtctcagtgc
tttggggtgctgtccagcagagtcgaaatgcaggatgctaatggaaccacagctcctgtg
cgtgccagtgctagcactcaggctctgtccagcagcgtgagctccagtaagctcttccct
agcagcacctccccccatgagacctcctttggagaagaggtggaggtgcacagcctgctc
gtggtcgatcagcacacttttgaagtgcttcatgcccatcagtttctgcccagtgagtat
gctctgagcctggtgtcctgtaagctgggcaaggatcctgctgtctatttcattgttggc
actgccatggtgtaccctgaggaggcagagcctaagcaaggccgcatcattgtcttccac
tacacagacggtaaactgcagacagtagccgaaaaagaggttaaaggagctgtgtactcc
atggtggagttcaatggcaaattgttggctagcatcaacagcactgtgcgcctttatgag
tggaccgcggagaaagagctgaggactgagtgtaatcactataacaacatcatggctctg
tatctgaagaccaagggagacttcatattggtgggagacctaatgaggtctgtgcttttg
ctggcatacaaacccatggaagggaactttgaagagattgctcgagacttcaatcctaac
tggatgagtgctgtggagattttggacgatgataacttccttggagcagaaaatgctttt
aacctttttgtctgtcaaaaagacagcgctgccaccactgatgaagagaggcagcatttg
caggaggtgggtgtgttccacttgggcgagtttgtgaatgtgttctgtcatggttctctg
gtcctgcagaaccttggcgagagttccactcctacccaaggttctgtgctctttggcacg
gttaatggaatgatcggattagtgacatctctgtcagaaggctggtacagtttactcatg
gatttgcaaaatagactcaacaaggtcattaagagtgtgggcaagatcgagcacagcttc
tggagatcattcaatacagaaaggaagacagagcaagctacaggtttcattgatggtgac
ctaatcgagagctttttggacctaggacgtgccaaaatgcaggaagtggttagcacacta
cagattgatgatggcagtgggatgaagcgagaggccacggtggatgaagtgattaaaata
gtggaggagctcaccaggatccactaa

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