Colossoma macropomum (tambaqui): 118817897
Help
Entry
118817897 CDS
T09004
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03420
Nucleotide excision repair
cmao04115
p53 signaling pathway
cmao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118817897 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
118817897 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
118817897 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118817897 (ddb2)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118817897 (ddb2)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118817897 (ddb2)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118817897 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
118817897
NCBI-ProteinID:
XP_036440791
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MARGKPKEEQKIPRGARKRQNEDCSESLSKKLKAKKDGKTLAKTETYIQASVKWTGGLKK
CTQISIPHYIYKSSLGQSIHSHLRQCLQEPFIRSLDSYRLHRTASPFDRRVTCLEWHPSH
PSTLAVGSKGGDIILWDYDVLNKTTFIQGKGAGDFIGGMKYCPTDVSKVYVASGDGTVTL
QSFEGLPSETLSRTPDCSHEHHSLCYWYCCVDVSVSRQMLVTGDNGGRLHLLGLDGKEIF
SEKLHKGKVTHAEFNVRCDWLMATASVDSTVKLWDLRNIKDKSSFLHEMVHEKPVNSAYF
NPTDSTKLLTTDQMNEIRIYSSCDWSKPAQVIVHPHRQFQHLTPIKATWHPIYDLIVAGR
YPDDRVFPDDERTIDVFDANTGRLVHQLRDPNTHGIVSLNKFSPVGDVLASGMGYNILIW
RRDDTVSHMPGRQSEKDTEAGGRAGSSRAQRGNPLRPRSERRGTAESTKLKKKLESTETK
SRTKSKTQCKTQKNKKP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagggaagccgaaagaggagcagaaaatcccccgcggtgccagaaaacgccag
aacgaagactgttcggagtctctgtctaagaagctgaaggcgaagaaagatggaaagacg
ttagcaaaaacagagacctacattcaggcaagtgtaaagtggactggagggctgaagaaa
tgtacccaaataagcatacctcactacatctacaagagctcattaggacagagcatccac
tctcatctacgacagtgcctccaagagccttttatacgctcgctggactcctacagactg
caccgcacagcgagcccatttgaccggagggtcacgtgtttggagtggcaccccagccat
cccagcactctggcagtgggctccaagggtggagacatcatcctgtgggactatgatgtg
ttgaacaagacaacatttatacaagggaagggagctggtgactttattggggggatgaag
tactgccccacagatgtatccaaagtctacgtggcctctggtgatggcactgtaacttta
cagagctttgaaggtctcccaagcgagacactgtctcgaaccccagactgcagtcatgag
caccacagtctttgttactggtactgctgcgtggatgtgtcagtgagtcgccagatgctt
gtcaccggggacaatggaggaagactgcatctgcttggacttgatggaaaagagattttc
agtgagaagctgcacaagggcaaagtgacccatgcagaattcaacgtgcgctgtgactgg
ctgatggcgacagcatctgtagacagcactgtcaagctgtgggacctcaggaacattaag
gacaaaagcagcttcttgcatgaaatggtacacgagaaaccagttaattctgcctatttc
aaccccacggatagcaccaagcttctcaccactgaccaaatgaatgaaatcaggatatat
tcttcttgtgattggtccaagccagctcaggttattgtacatccgcaccggcaattccag
cacctgacaccaatcaaggcaacctggcatcccatatatgacctgatcgtggctggccgc
tatccagatgaccgtgtctttcctgatgatgagagaactattgatgtctttgatgctaac
actggcagacttgttcaccagctgagagaccccaatacccatggtattgtatctctcaac
aaattcagcccagtaggggatgtgttggcatctggaatgggctataatattttgatatgg
aggcgagatgatacagtgagccatatgcctggaagacagagtgagaaagatacagaggct
ggagggagagcaggaagctccagagcgcaacgaggcaatccactgcggccccgcagtgaa
agaagaggaactgcagaaagtaccaagctaaagaaaaaactggaatcaaccgagaccaag
tcaaggaccaaaagcaagactcaatgtaaaacgcaaaaaaacaagaagccatag
DBGET
integrated database retrieval system
