Colossoma macropomum (tambaqui): 118817997
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Entry
118817997 CDS
T09004
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118817997 (irf2bp1)
04121 Ubiquitin system [BR:
cmao04121
]
118817997 (irf2bp1)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118817997 (irf2bp1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Atypical E3
118817997 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Sharpin_PH
Motif
Other DBs
NCBI-GeneID:
118817997
NCBI-ProteinID:
XP_036440969
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPSGKHGPGVKDGAVDGGRPPGERYERARGDYVPARLPNGLPRLEDGGP
PEVSRQSPNARRTGLVGAVPPNLMAQGLVGAPHGLLTAVPGLGRAGSAPLTISTPMLSEI
SKRQAMGMGMGVGVASFMSSDFEKELKEKQRNAEALAELSESVRNRADDWAGRPKAVRDT
LLTLSSCTPFNVRFKKDHGLVGRVFAFDAKLGVEFELKVFVEYPCGSGQVFSSLLTLVKQ
MFHDSQKDTGKVISSGFKYVEYEKRHGTGDWRLLSELLSDGVRAFKDPPTPDAIPQPYLD
ANCSMLPTALCHIGRPAQPRLRRRKASPEPDGVDRLPSEEQLRQHWPLGTYPVIGGHIPA
TSMPSAGQPPPSLQEGLPGSHGSDPSPITALMSVADNVGTAGQSPKDVPGGSGAHSSSAG
LQNSASPSSAGQRRLASRNGEAPAGSGGAAVAAAMPTAGGGDQGAVTGSDAAGAGSVPLC
CTICHERLEDTHFVQCPSVPGHKFCFPCTRDFIRSQGSGSEVYCPSGDKCPLVGSNVPWA
FMQGEISTILAGDVKVKKERDP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcctcacaggcgtcttccaggcggcagtggtgctacctgtgcgacctgccg
aagatgccctgggccatgatctgggatttcagcgaggctgtgtgccggggctgcgtgaat
tatgagggtgcggaccgcatcgagctgctgatagacacggccaggcagctgaagaggacc
catgtgatgcaggacggtaggtctcctggtcctcagccgagcggtaagcatggtccaggg
gtgaaggatggagctgtagatggaggcagacctcctggtgagagatatgagagagctaga
ggagattatgtccctgctaggctcccaaacgggctccccaggcttgaggatggaggtcca
cctgaggtgagcaggcagagccccaatgccaggaggactgggctggtgggagccgttcct
ccaaacctgatggcgcaagggctcgttggagcacctcatggcttgctgaccgccgtgccg
ggcctcgggagagccgggagcgccccgctgaccatttccacccccatgctgagcgagata
agtaagaggcaggccatgggcatgggcatgggtgttggggtggcgtctttcatgagctcc
gatttcgagaaggagctgaaggagaagcagaggaatgccgaagccttggctgagctgtcc
gaaagtgtccggaaccgggccgacgactgggccgggcgccccaaagcggtcagggacacc
ttgctgacgctgtccagctgcacccccttcaacgtgaggttcaagaaggaccacgggctc
gtcggcagagtcttcgccttcgatgccaagctcggggtcgagtttgagctgaaggttttc
gtcgaatacccttgcggctccggccaggtattctccagcctgctcacgctggtcaagcag
atgttccacgacagccagaaggacacgggcaaggtgatcagctctggcttcaaatacgtc
gaatacgagaagaggcatggcactggagattggcgcctgctttcggagcttctcagtgat
ggagtcagggcatttaaagacccgccgacccccgatgccatcccacagccttacctggac
gccaactgctccatgttacccactgcgctctgccacatcggccgcccggcccagccccgt
ctccgccgccgcaaggcttcgccagagccggatggtgtggataggctgccgtcagaggag
cagctgcgccagcactggccccttggcacgtacccagtcataggcgggcacattcctgcc
acctctatgcccagcgccgggcagcctcctcctagcctccaggagggccttcctggttcc
catggcagtgacccctcacccatcaccgccctaatgagcgtggcagacaatgtgggcacc
gccggccagtctccaaaagatgtgccgggcggtagtggtgcccactcgtcctctgcgggt
ctccagaacagcgccagcccctcttcggccgggcagaggcgcctggcatcacgtaacgga
gaagcaccggccgggtctggaggggcagcggtcgccgcagcgatgccgactgctggaggg
ggtgatcagggggctgtgacgggcagcgacgccgccggagcgggcagcgtccctctctgc
tgcaccatctgccacgaacggctggaggacacacacttcgtccagtgcccgtcggtgccg
gggcataagttctgcttcccctgcacccgagatttcatccgcagccagggctcgggcagc
gaggtgtactgccccagcggagacaagtgcccactggtgggctccaacgtgccctgggca
ttcatgcagggagagatatccaccatcctggctggagacgtgaaagtgaagaaagagaga
gacccctaa
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